RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 TRPA1O75762 1119 aa9.09□□□□□ -0.95
SMN2-214ENST00000626847 GRNP28799 593 aaKnown RBP9.09□□□□□ -0.95
SMN2-214ENST00000626847 KCNJ6P48051 423 aa9.09□□□□□ -0.95
SMN2-214ENST00000626847 BLVRAP53004 296 aa9.09□□□□□ -0.95
SMN2-214ENST00000626847 SIK1P57059 783 aa9.09□□□□□ -0.95
SMN2-214ENST00000626847 GNAI1P63096 354 aa9.09□□□□□ -0.95
SMN2-214ENST00000626847 UBXN2AP68543 259 aa9.09□□□□□ -0.95
SMN2-214ENST00000626847 MRPS25P82663 173 aaKnown RBP9.09□□□□□ -0.95
SMN2-214ENST00000626847 APOBRQ0VD83 1088 aa9.09□□□□□ -0.95
SMN2-214ENST00000626847 ITPK1Q13572 414 aa9.09□□□□□ -0.95
SMN2-214ENST00000626847 SPIDRQ14159 915 aa9.09□□□□□ -0.95
SMN2-214ENST00000626847 SPCS2Q15005 226 aa9.09□□□□□ -0.95
SMN2-214ENST00000626847 BCL2A1Q16548 175 aa9.09□□□□□ -0.95
SMN2-214ENST00000626847 BEND6Q5SZJ8 279 aaPredicted RBP9.09□□□□□ -0.95
SMN2-214ENST00000626847 SPATA1Q5VX52 437 aa9.09□□□□□ -0.95
SMN2-214ENST00000626847 GALNT17Q6IS24 598 aa9.09□□□□□ -0.95
SMN2-214ENST00000626847 GRAMD2AQ8IUY3 354 aa9.09□□□□□ -0.95
SMN2-214ENST00000626847 DEPTORQ8TB45 409 aa9.09□□□□□ -0.95
SMN2-214ENST00000626847 LEO1Q8WVC0 666 aaPredicted RBP9.09□□□□□ -0.95
SMN2-214ENST00000626847 YIPF3Q9GZM5 350 aa9.09□□□□□ -0.95
SMN2-214ENST00000626847 TGIF2Q9GZN2 237 aa9.09□□□□□ -0.95
SMN2-214ENST00000626847 CENPHQ9H3R5 247 aa9.09□□□□□ -0.95
SMN2-214ENST00000626847 RTEL1Q9NZ71 1219 aa9.09□□□□□ -0.95
SMN2-214ENST00000626847 CNTN3Q9P232 1028 aa9.09□□□□□ -0.95
SMN2-214ENST00000626847 STAP2Q9UGK3 403 aa9.09□□□□□ -0.95
SMN2-214ENST00000626847 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.09□□□□□ -0.95
SMN2-214ENST00000626847 PCDHGB3Q9Y5G1 929 aa9.09□□□□□ -0.95
SMN2-214ENST00000626847 USP31Q70CQ4 1352 aa9.08□□□□□ -0.96
SMN2-214ENST00000626847 SH3TC1Q8TE82 1336 aa9.08□□□□□ -0.96
SMN2-214ENST00000626847 A0A0B4J203 849 aa9.08□□□□□ -0.96
SMN2-214ENST00000626847 NFKBIEO00221 500 aa9.08□□□□□ -0.96
SMN2-214ENST00000626847 KHNYNO15037 678 aaKnown RBP9.08□□□□□ -0.96
SMN2-214ENST00000626847 SASH3O75995 380 aa9.08□□□□□ -0.96
SMN2-214ENST00000626847 S100A6P06703 90 aa9.08□□□□□ -0.96
SMN2-214ENST00000626847 RRM1P23921 792 aa9.08□□□□□ -0.96
SMN2-214ENST00000626847 CDC25BP30305 580 aa9.08□□□□□ -0.96
SMN2-214ENST00000626847 CSTF2P33240 577 aaKnown RBP eCLIP9.08□□□□□ -0.96
SMN2-214ENST00000626847 ACADVLP49748 655 aa9.08□□□□□ -0.96
SMN2-214ENST00000626847 TRAPPC3LQ5T215 181 aa9.08□□□□□ -0.96
SMN2-214ENST00000626847 C10orf76Q5T2E6 689 aa9.08□□□□□ -0.96
SMN2-214ENST00000626847 NCAPH2Q6IBW4 605 aa9.08□□□□□ -0.96
SMN2-214ENST00000626847 FIP1L1Q6UN15 594 aaKnown RBP9.08□□□□□ -0.96
SMN2-214ENST00000626847 DPH6Q7L8W6 267 aa9.08□□□□□ -0.96
SMN2-214ENST00000626847 SRGAP1Q7Z6B7 1085 aa9.08□□□□□ -0.96
SMN2-214ENST00000626847 GALNT12Q8IXK2 581 aa9.08□□□□□ -0.96
SMN2-214ENST00000626847 C17orf53Q8N3J3 647 aaPredicted RBP9.08□□□□□ -0.96
SMN2-214ENST00000626847 LINC00469Q8N7U9 141 aa9.08□□□□□ -0.96
SMN2-214ENST00000626847 NSUN7Q8NE18 718 aaKnown RBP9.08□□□□□ -0.96
SMN2-214ENST00000626847 LILRB1Q8NHL6 650 aaPredicted RBP9.08□□□□□ -0.96
SMN2-214ENST00000626847 P3H4Q92791 437 aa9.08□□□□□ -0.96
SMN2-214ENST00000626847 GFM2Q969S9 779 aaKnown RBP9.08□□□□□ -0.96
SMN2-214ENST00000626847 SKA1Q96BD8 255 aa9.08□□□□□ -0.96
SMN2-214ENST00000626847 IL17RAQ96F46 866 aa9.08□□□□□ -0.96
SMN2-214ENST00000626847 ZNF496Q96IT1 587 aaPredicted RBP9.08□□□□□ -0.96
SMN2-214ENST00000626847 PNMA5Q96PV4 448 aa9.08□□□□□ -0.96
SMN2-214ENST00000626847 TCF12Q99081 682 aa9.08□□□□□ -0.96
SMN2-214ENST00000626847 BCO2Q9BYV7 579 aa9.08□□□□□ -0.96
SMN2-214ENST00000626847 SRCIN1Q9C0H9 1055 aa9.08□□□□□ -0.96
SMN2-214ENST00000626847 GOLPH3LQ9H4A5 285 aa9.08□□□□□ -0.96
SMN2-214ENST00000626847 VCPKMTQ9H867 229 aa9.08□□□□□ -0.96
SMN2-214ENST00000626847 CNNM2Q9H8M5 875 aa9.08□□□□□ -0.96
SMN2-214ENST00000626847 IL1RAPL1Q9NZN1 696 aa9.08□□□□□ -0.96
SMN2-214ENST00000626847 ZFATQ9P243 1243 aa9.08□□□□□ -0.96
SMN2-214ENST00000626847 VPS18Q9P253 973 aa9.08□□□□□ -0.96
SMN2-214ENST00000626847 FAM184BQ9ULE4 1060 aa9.08□□□□□ -0.96
SMN2-214ENST00000626847 CCDC88AQ3V6T2 1871 aa9.08□□□□□ -0.96
SMN2-214ENST00000626847 PHF20L1A8MW92 1017 aa9.07□□□□□ -0.96
SMN2-214ENST00000626847 DDNO94850 711 aaPredicted RBP9.07□□□□□ -0.96
SMN2-214ENST00000626847 FGAP02671 866 aa9.07□□□□□ -0.96
SMN2-214ENST00000626847 USP17L7P0C7H9 530 aa9.07□□□□□ -0.96
SMN2-214ENST00000626847 BTF3P20290 206 aaKnown RBP9.07□□□□□ -0.96
SMN2-214ENST00000626847 PRKAR2BP31323 418 aa9.07□□□□□ -0.96
SMN2-214ENST00000626847 HSPA4P34932 840 aa9.07□□□□□ -0.96
SMN2-214ENST00000626847 ETV3P41162 512 aa9.07□□□□□ -0.96
SMN2-214ENST00000626847 CD97P48960 835 aa9.07□□□□□ -0.96
SMN2-214ENST00000626847 GJA9P57773 515 aa9.07□□□□□ -0.96
SMN2-214ENST00000626847 CCINQ13939 588 aa9.07□□□□□ -0.96
SMN2-214ENST00000626847 SGSM1Q2NKQ1 1148 aa9.07□□□□□ -0.96
SMN2-214ENST00000626847 PROSER3Q2NL68 480 aa9.07□□□□□ -0.96
SMN2-214ENST00000626847 NXPE4Q6UWF7 544 aa9.07□□□□□ -0.96
SMN2-214ENST00000626847 HS2ST1Q7LGA3 356 aa9.07□□□□□ -0.96
SMN2-214ENST00000626847 ZNF554Q86TJ5 538 aa9.07□□□□□ -0.96
SMN2-214ENST00000626847 SPERTQ8NA61 448 aa9.07□□□□□ -0.96
SMN2-214ENST00000626847 PIGBQ92521 554 aa9.07□□□□□ -0.96
SMN2-214ENST00000626847 IP6K1Q92551 441 aa9.07□□□□□ -0.96
SMN2-214ENST00000626847 SDCCAG3Q96C92 435 aa9.07□□□□□ -0.96
SMN2-214ENST00000626847 CLIP3Q96DZ5 547 aa9.07□□□□□ -0.96
SMN2-214ENST00000626847 ASIC4Q96FT7 647 aa9.07□□□□□ -0.96
SMN2-214ENST00000626847 CAPNS2Q96L46 248 aa9.07□□□□□ -0.96
SMN2-214ENST00000626847 CHRDQ9H2X0 955 aa9.07□□□□□ -0.96
SMN2-214ENST00000626847 CAPN10Q9HC96 672 aa9.07□□□□□ -0.96
SMN2-214ENST00000626847 TBCCD1Q9NVR7 557 aa9.07□□□□□ -0.96
SMN2-214ENST00000626847 POLG2Q9UHN1 485 aa9.07□□□□□ -0.96
SMN2-214ENST00000626847 ABT1Q9ULW3 272 aaKnown RBP9.07□□□□□ -0.96
SMN2-214ENST00000626847 TTC41PQ6P2S7 1318 aa9.07□□□□□ -0.96
SMN2-214ENST00000626847 TMEM238LA0A1B0GVL6 79 aa9.06□□□□□ -0.96
SMN2-214ENST00000626847 A0A1W2PRQ8 180 aa9.06□□□□□ -0.96
SMN2-214ENST00000626847 DCDC2BA2VCK2 349 aa9.06□□□□□ -0.96
SMN2-214ENST00000626847 SRRM3A6NNA2 597 aaPredicted RBP9.06□□□□□ -0.96
SMN2-214ENST00000626847 ST8SIA5O15466 376 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms