RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 C8orf34Q49A92 452 aa12.15□□□□□ -0.46
SSBP4-215ENST00000625926 TCEAL5Q5H9L2 206 aa12.15□□□□□ -0.46
SSBP4-215ENST00000625926 FAM102BQ5T8I3 360 aa12.15□□□□□ -0.46
SSBP4-215ENST00000625926 EXOC8Q8IYI6 725 aa12.15□□□□□ -0.46
SSBP4-215ENST00000625926 ZSCAN31Q96LW9 406 aaPredicted RBP12.15□□□□□ -0.46
SSBP4-215ENST00000625926 LLPHQ9BRT6 129 aaKnown RBP12.15□□□□□ -0.46
SSBP4-215ENST00000625926 UBE2ZQ9H832 354 aaPredicted RBP12.15□□□□□ -0.46
SSBP4-215ENST00000625926 CYP26B1Q9NR63 512 aa12.15□□□□□ -0.46
SSBP4-215ENST00000625926 SUCLA2Q9P2R7 463 aaPredicted RBP12.15□□□□□ -0.46
SSBP4-215ENST00000625926 PCDHA12Q9UN75 941 aa12.15□□□□□ -0.46
SSBP4-215ENST00000625926 PLAGL2Q9UPG8 496 aa12.15□□□□□ -0.46
SSBP4-215ENST00000625926 PPME1Q9Y570 386 aa12.15□□□□□ -0.46
SSBP4-215ENST00000625926 COL4A6Q14031 1691 aa12.15□□□□□ -0.46
SSBP4-215ENST00000625926 CDH23Q9H251 3354 aa12.15□□□□□ -0.47
SSBP4-215ENST00000625926 TBKBP1A7MCY6 615 aa12.14□□□□□ -0.47
SSBP4-215ENST00000625926 HOXA2O43364 376 aa12.14□□□□□ -0.47
SSBP4-215ENST00000625926 NCK2O43639 380 aa12.14□□□□□ -0.47
SSBP4-215ENST00000625926 ST3GAL1Q11201 340 aa12.14□□□□□ -0.47
SSBP4-215ENST00000625926 CALCRLQ16602 461 aa12.14□□□□□ -0.47
SSBP4-215ENST00000625926 PLA2G4FQ68DD2 849 aa12.14□□□□□ -0.47
SSBP4-215ENST00000625926 NCAPH2Q6IBW4 605 aa12.14□□□□□ -0.47
SSBP4-215ENST00000625926 OTUD6AQ7L8S5 288 aa12.14□□□□□ -0.47
SSBP4-215ENST00000625926 ZNF410Q86VK4 478 aa12.14□□□□□ -0.47
SSBP4-215ENST00000625926 RHPN2Q8IUC4 686 aa12.14□□□□□ -0.47
SSBP4-215ENST00000625926 CCDC83Q8IWF9 413 aa12.14□□□□□ -0.47
SSBP4-215ENST00000625926 C4orf19Q8IY42 314 aa12.14□□□□□ -0.47
SSBP4-215ENST00000625926 SLC7A3Q8WY07 619 aa12.14□□□□□ -0.47
SSBP4-215ENST00000625926 CEP170P1Q96L14 293 aa12.14□□□□□ -0.47
SSBP4-215ENST00000625926 LXNQ9BS40 222 aa12.14□□□□□ -0.47
SSBP4-215ENST00000625926 INO80BQ9C086 356 aaPredicted RBP12.14□□□□□ -0.47
SSBP4-215ENST00000625926 ZSWIM4Q9H7M6 989 aa12.14□□□□□ -0.47
SSBP4-215ENST00000625926 ALG13Q9NP73 1137 aaKnown RBP12.14□□□□□ -0.47
SSBP4-215ENST00000625926 CHST12Q9NRB3 414 aa12.14□□□□□ -0.47
SSBP4-215ENST00000625926 AAASQ9NRG9 546 aa12.14□□□□□ -0.47
SSBP4-215ENST00000625926 RGL1Q9NZL6 768 aa12.14□□□□□ -0.47
SSBP4-215ENST00000625926 TRIP12Q14669 1992 aaPredicted RBP12.13□□□□□ -0.47
SSBP4-215ENST00000625926 A0A087WZ62 844 aa12.13□□□□□ -0.47
SSBP4-215ENST00000625926 FGFR1P11362 822 aa12.13□□□□□ -0.47
SSBP4-215ENST00000625926 KCNA5P22460 613 aa12.13□□□□□ -0.47
SSBP4-215ENST00000625926 SFPQP23246 707 aaKnown RBP eCLIP12.13□□□□□ -0.47
SSBP4-215ENST00000625926 YWHABP31946 246 aaKnown RBP12.13□□□□□ -0.47
SSBP4-215ENST00000625926 RFC5P40937 340 aa12.13□□□□□ -0.47
SSBP4-215ENST00000625926 POLGP54098 1239 aaPredicted RBP12.13□□□□□ -0.47
SSBP4-215ENST00000625926 NPEPPSP55786 919 aa12.13□□□□□ -0.47
SSBP4-215ENST00000625926 SPIRE1Q08AE8 756 aa12.13□□□□□ -0.47
SSBP4-215ENST00000625926 CTTNQ14247 550 aaKnown RBP12.13□□□□□ -0.47
SSBP4-215ENST00000625926 LEXMQ3ZCV2 418 aa12.13□□□□□ -0.47
SSBP4-215ENST00000625926 SPOUT1Q5T280 376 aaKnown RBP12.13□□□□□ -0.47
SSBP4-215ENST00000625926 TPH2Q8IWU9 490 aa12.13□□□□□ -0.47
SSBP4-215ENST00000625926 KLHL23Q8NBE8 558 aa12.13□□□□□ -0.47
SSBP4-215ENST00000625926 SPPL3Q8TCT6 385 aa12.13□□□□□ -0.47
SSBP4-215ENST00000625926 PABPC5Q96DU9 382 aaKnown RBP12.13□□□□□ -0.47
SSBP4-215ENST00000625926 DYDC2Q96IM9 177 aa12.13□□□□□ -0.47
SSBP4-215ENST00000625926 C8orf76Q96K31 380 aa12.13□□□□□ -0.47
SSBP4-215ENST00000625926 NECAB3Q96P71 396 aaPredicted RBP12.13□□□□□ -0.47
SSBP4-215ENST00000625926 KIF2CQ99661 725 aa12.13□□□□□ -0.47
SSBP4-215ENST00000625926 FDXACB1Q9BRP7 624 aaPredicted RBP12.13□□□□□ -0.47
SSBP4-215ENST00000625926 TMEM117Q9H0C3 514 aa12.13□□□□□ -0.47
SSBP4-215ENST00000625926 TTC12Q9H892 705 aaPredicted RBP12.13□□□□□ -0.47
SSBP4-215ENST00000625926 SH2B1Q9NRF2 756 aaPredicted RBP12.13□□□□□ -0.47
SSBP4-215ENST00000625926 TYW1Q9NV66 732 aaKnown RBP12.13□□□□□ -0.47
SSBP4-215ENST00000625926 DACT1Q9NYF0 836 aa12.13□□□□□ -0.47
SSBP4-215ENST00000625926 WRAP73Q9P2S5 460 aaPredicted RBP12.13□□□□□ -0.47
SSBP4-215ENST00000625926 PCDHB12Q9Y5F1 795 aa12.13□□□□□ -0.47
SSBP4-215ENST00000625926 DOCK5Q9H7D0 1870 aa12.12□□□□□ -0.47
SSBP4-215ENST00000625926 NCOR1O75376 2440 aa12.12□□□□□ -0.47
SSBP4-215ENST00000625926 A0A0U1RQF3 1178 aa12.12□□□□□ -0.47
SSBP4-215ENST00000625926 NEMFO60524 1076 aa12.12□□□□□ -0.47
SSBP4-215ENST00000625926 CSDE1O75534 798 aaKnown RBP12.12□□□□□ -0.47
SSBP4-215ENST00000625926 SLITRK3O94933 977 aa12.12□□□□□ -0.47
SSBP4-215ENST00000625926 ITGB1P05556 798 aa12.12□□□□□ -0.47
SSBP4-215ENST00000625926 FGFR4P22455 802 aa12.12□□□□□ -0.47
SSBP4-215ENST00000625926 TXKP42681 527 aa12.12□□□□□ -0.47
SSBP4-215ENST00000625926 HMGN5P82970 282 aaKnown RBP12.12□□□□□ -0.47
SSBP4-215ENST00000625926 GUCY1B3Q02153 619 aa12.12□□□□□ -0.47
SSBP4-215ENST00000625926 CYP4A11Q02928 519 aa12.12□□□□□ -0.47
SSBP4-215ENST00000625926 CAMK1Q14012 370 aa12.12□□□□□ -0.47
SSBP4-215ENST00000625926 COL19A1Q14993 1142 aa12.12□□□□□ -0.47
SSBP4-215ENST00000625926 CSPP1Q1MSJ5 1256 aa12.12□□□□□ -0.47
SSBP4-215ENST00000625926 PUS10Q3MIT2 529 aaKnown RBP12.12□□□□□ -0.47
SSBP4-215ENST00000625926 XKR9Q5GH70 373 aa12.12□□□□□ -0.47
SSBP4-215ENST00000625926 EP400NLQ6ZTU2 488 aa12.12□□□□□ -0.47
SSBP4-215ENST00000625926 ECHDC2Q86YB7 292 aa12.12□□□□□ -0.47
SSBP4-215ENST00000625926 ABI1Q8IZP0 508 aa12.12□□□□□ -0.47
SSBP4-215ENST00000625926 ZNF579Q8NAF0 562 aaKnown RBP12.12□□□□□ -0.47
SSBP4-215ENST00000625926 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.12□□□□□ -0.47
SSBP4-215ENST00000625926 NEK9Q8TD19 979 aa12.12□□□□□ -0.47
SSBP4-215ENST00000625926 PPP2R3CQ969Q6 453 aa12.12□□□□□ -0.47
SSBP4-215ENST00000625926 NLRP4Q96MN2 994 aa12.12□□□□□ -0.47
SSBP4-215ENST00000625926 HSD17B14Q9BPX1 270 aa12.12□□□□□ -0.47
SSBP4-215ENST00000625926 EIF2AK1Q9BQI3 630 aaKnown RBP12.12□□□□□ -0.47
SSBP4-215ENST00000625926 DHX33Q9H6R0 707 aaKnown RBP12.12□□□□□ -0.47
SSBP4-215ENST00000625926 LYPLA2O95372 231 aa12.11□□□□□ -0.47
SSBP4-215ENST00000625926 EOMESO95936 686 aa12.11□□□□□ -0.47
SSBP4-215ENST00000625926 ATP2B1P20020 1258 aa12.11□□□□□ -0.47
SSBP4-215ENST00000625926 RBM25P49756 843 aaKnown RBP12.11□□□□□ -0.47
SSBP4-215ENST00000625926 UBE3AQ05086 875 aa12.11□□□□□ -0.47
SSBP4-215ENST00000625926 KSR1Q8IVT5 923 aa12.11□□□□□ -0.47
SSBP4-215ENST00000625926 FAM184AQ8NB25 1140 aa12.11□□□□□ -0.47
SSBP4-215ENST00000625926 RNF169Q8NCN4 708 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms