RNA–Protein interactions for RNA: ENST00000625905.1

NELFE-214, Transcript of negative elongation factor complex member E, humanhuman

TSL 5 BASIC

Gene NELFE, Length 111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-214ENST00000625905 CDK5RAP3Q96JB5 506 aa10.27□□□□□ -0.77
NELFE-214ENST00000625905 ZNF668Q96K58 619 aaPredicted RBP10.27□□□□□ -0.77
NELFE-214ENST00000625905 FTHL17Q9BXU8 183 aa10.27□□□□□ -0.77
NELFE-214ENST00000625905 PBX4Q9BYU1 374 aa10.27□□□□□ -0.77
NELFE-214ENST00000625905 ADAMTS10Q9H324 1103 aa10.27□□□□□ -0.77
NELFE-214ENST00000625905 ERVK-5Q9HDB9 667 aa10.27□□□□□ -0.77
NELFE-214ENST00000625905 DDX19AQ9NUU7 478 aaKnown RBP10.27□□□□□ -0.77
NELFE-214ENST00000625905 MSRAQ9UJ68 235 aa10.27□□□□□ -0.77
NELFE-214ENST00000625905 DBR1Q9UK59 544 aaKnown RBP10.27□□□□□ -0.77
NELFE-214ENST00000625905 PADI3Q9ULW8 664 aa10.27□□□□□ -0.77
NELFE-214ENST00000625905 COL4A3BPQ9Y5P4 624 aa10.27□□□□□ -0.77
NELFE-214ENST00000625905 CLIC4Q9Y696 253 aa10.27□□□□□ -0.77
NELFE-214ENST00000625905 LAMA3Q16787 3333 aa10.27□□□□□ -0.77
NELFE-214ENST00000625905 TMEM265A0A087WTH1 108 aa10.26□□□□□ -0.77
NELFE-214ENST00000625905 GPR182O15218 404 aa10.26□□□□□ -0.77
NELFE-214ENST00000625905 F13A1P00488 732 aa10.26□□□□□ -0.77
NELFE-214ENST00000625905 DARSP14868 501 aaKnown RBP10.26□□□□□ -0.77
NELFE-214ENST00000625905 SFPQP23246 707 aaKnown RBP eCLIP10.26□□□□□ -0.77
NELFE-214ENST00000625905 EIF4BP23588 611 aaKnown RBP10.26□□□□□ -0.77
NELFE-214ENST00000625905 CDC25AP30304 524 aa10.26□□□□□ -0.77
NELFE-214ENST00000625905 CEBPZQ03701 1054 aaKnown RBP10.26□□□□□ -0.77
NELFE-214ENST00000625905 PKP1Q13835 747 aa10.26□□□□□ -0.77
NELFE-214ENST00000625905 FAM117BQ6P1L5 589 aa10.26□□□□□ -0.77
NELFE-214ENST00000625905 TMCO2Q7Z6W1 182 aaPredicted RBP10.26□□□□□ -0.77
NELFE-214ENST00000625905 FAM228AQ86W67 206 aa10.26□□□□□ -0.77
NELFE-214ENST00000625905 MCPH1Q8NEM0 835 aa10.26□□□□□ -0.77
NELFE-214ENST00000625905 RASSF8Q8NHQ8 419 aa10.26□□□□□ -0.77
NELFE-214ENST00000625905 AK8Q96MA6 479 aa10.26□□□□□ -0.77
NELFE-214ENST00000625905 ZNF396Q96N95 335 aaPredicted RBP10.26□□□□□ -0.77
NELFE-214ENST00000625905 USP28Q96RU2 1077 aa10.26□□□□□ -0.77
NELFE-214ENST00000625905 ZBED2Q9BTP6 218 aa10.26□□□□□ -0.77
NELFE-214ENST00000625905 GCOM2Q9BZD3 368 aaPredicted RBP10.26□□□□□ -0.77
NELFE-214ENST00000625905 POLR3FQ9H1D9 316 aaPredicted RBP10.26□□□□□ -0.77
NELFE-214ENST00000625905 BHMT2Q9H2M3 363 aa10.26□□□□□ -0.77
NELFE-214ENST00000625905 CDHR5Q9HBB8 845 aa10.26□□□□□ -0.77
NELFE-214ENST00000625905 XPNPEP1Q9NQW7 623 aa10.26□□□□□ -0.77
NELFE-214ENST00000625905 KIAA1024Q9UPX6 916 aa10.26□□□□□ -0.77
NELFE-214ENST00000625905 NOC2LQ9Y3T9 749 aaKnown RBP10.26□□□□□ -0.77
NELFE-214ENST00000625905 PCDHA11Q9Y5I1 949 aa10.26□□□□□ -0.77
NELFE-214ENST00000625905 A0A087WWV3 80 aa10.25□□□□□ -0.77
NELFE-214ENST00000625905 A0A087WZ62 844 aa10.25□□□□□ -0.77
NELFE-214ENST00000625905 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.25□□□□□ -0.77
NELFE-214ENST00000625905 DENND3A2RUS2 1198 aa10.25□□□□□ -0.77
NELFE-214ENST00000625905 TLL1O43897 1013 aa10.25□□□□□ -0.77
NELFE-214ENST00000625905 GJB5O95377 273 aa10.25□□□□□ -0.77
NELFE-214ENST00000625905 MARCKSP29966 332 aaPredicted RBP10.25□□□□□ -0.77
NELFE-214ENST00000625905 LONP1P36776 959 aaKnown RBP10.25□□□□□ -0.77
NELFE-214ENST00000625905 PHKA2P46019 1235 aa10.25□□□□□ -0.77
NELFE-214ENST00000625905 TFDP1Q14186 410 aa10.25□□□□□ -0.77
NELFE-214ENST00000625905 MXD4Q14582 209 aaPredicted RBP10.25□□□□□ -0.77
NELFE-214ENST00000625905 STK38Q15208 465 aa10.25□□□□□ -0.77
NELFE-214ENST00000625905 PTPAQ15257 358 aa10.25□□□□□ -0.77
NELFE-214ENST00000625905 ECM1Q16610 540 aa10.25□□□□□ -0.77
NELFE-214ENST00000625905 PPP2R2DQ66LE6 453 aa10.25□□□□□ -0.77
NELFE-214ENST00000625905 PADI6Q6TGC4 694 aa10.25□□□□□ -0.77
NELFE-214ENST00000625905 FAM43BQ6ZT52 329 aaPredicted RBP10.25□□□□□ -0.77
NELFE-214ENST00000625905 CABP7Q86V35 215 aa10.25□□□□□ -0.77
NELFE-214ENST00000625905 KSR1Q8IVT5 923 aa10.25□□□□□ -0.77
NELFE-214ENST00000625905 DEFB123Q8N688 67 aa10.25□□□□□ -0.77
NELFE-214ENST00000625905 RNF149Q8NC42 400 aa10.25□□□□□ -0.77
NELFE-214ENST00000625905 PRPF31Q8WWY3 499 aaKnown RBP10.25□□□□□ -0.77
NELFE-214ENST00000625905 LINC01599Q8WXQ3 324 aa10.25□□□□□ -0.77
NELFE-214ENST00000625905 FDXACB1Q9BRP7 624 aaPredicted RBP10.25□□□□□ -0.77
NELFE-214ENST00000625905 MMTAG2Q9BU76 263 aaKnown RBP10.25□□□□□ -0.77
NELFE-214ENST00000625905 NT5C3AQ9H0P0 336 aa10.25□□□□□ -0.77
NELFE-214ENST00000625905 NKX2-4Q9H2Z4 354 aa10.25□□□□□ -0.77
NELFE-214ENST00000625905 TMX1Q9H3N1 280 aa10.25□□□□□ -0.77
NELFE-214ENST00000625905 ST3GAL5Q9UNP4 418 aa10.25□□□□□ -0.77
NELFE-214ENST00000625905 YBX2Q9Y2T7 364 aaKnown RBP10.25□□□□□ -0.77
NELFE-214ENST00000625905 COL4A6Q14031 1691 aa10.25□□□□□ -0.77
NELFE-214ENST00000625905 ASAP2O43150 1006 aa10.24□□□□□ -0.77
NELFE-214ENST00000625905 SLC26A4O43511 780 aa10.24□□□□□ -0.77
NELFE-214ENST00000625905 UPP2O95045 317 aa10.24□□□□□ -0.77
NELFE-214ENST00000625905 CA3P07451 260 aa10.24□□□□□ -0.77
NELFE-214ENST00000625905 SRGAP2CP0DJJ0 459 aa10.24□□□□□ -0.77
NELFE-214ENST00000625905 MYOGP15173 224 aa10.24□□□□□ -0.77
NELFE-214ENST00000625905 IBSPP21815 317 aaPredicted RBP10.24□□□□□ -0.77
NELFE-214ENST00000625905 TXLNAP40222 546 aa10.24□□□□□ -0.77
NELFE-214ENST00000625905 UBA7P41226 1012 aa10.24□□□□□ -0.77
NELFE-214ENST00000625905 NASPP49321 788 aaPredicted RBP10.24□□□□□ -0.77
NELFE-214ENST00000625905 GRIN1Q05586 938 aa10.24□□□□□ -0.77
NELFE-214ENST00000625905 LAMTOR4Q0VGL1 99 aa10.24□□□□□ -0.77
NELFE-214ENST00000625905 HYIQ5T013 277 aa10.24□□□□□ -0.77
NELFE-214ENST00000625905 FAM102BQ5T8I3 360 aa10.24□□□□□ -0.77
NELFE-214ENST00000625905 Q7L0L9 218 aa10.24□□□□□ -0.77
NELFE-214ENST00000625905 MAEAQ7L5Y9 396 aa10.24□□□□□ -0.77
NELFE-214ENST00000625905 ASAP3Q8TDY4 903 aa10.24□□□□□ -0.77
NELFE-214ENST00000625905 CALML4Q96GE6 196 aa10.24□□□□□ -0.77
NELFE-214ENST00000625905 FAM161BQ96MY7 647 aa10.24□□□□□ -0.77
NELFE-214ENST00000625905 YME1L1Q96TA2 773 aa10.24□□□□□ -0.77
NELFE-214ENST00000625905 INO80BQ9C086 356 aaPredicted RBP10.24□□□□□ -0.77
NELFE-214ENST00000625905 TSPYL2Q9H2G4 693 aaPredicted RBP10.24□□□□□ -0.77
NELFE-214ENST00000625905 SLC28A3Q9HAS3 691 aa10.24□□□□□ -0.77
NELFE-214ENST00000625905 GPRC5CQ9NQ84 441 aa10.24□□□□□ -0.77
NELFE-214ENST00000625905 C1orf112Q9NSG2 853 aa10.24□□□□□ -0.77
NELFE-214ENST00000625905 FBXO2Q9UK22 296 aaPredicted RBP10.24□□□□□ -0.77
NELFE-214ENST00000625905 DNM3Q9UQ16 869 aa10.24□□□□□ -0.77
NELFE-214ENST00000625905 E9PMD0 336 aa10.23□□□□□ -0.77
NELFE-214ENST00000625905 MGEA5O60502 916 aa10.23□□□□□ -0.77
NELFE-214ENST00000625905 CSDE1O75534 798 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms