RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 ICE2Q659A1 982 aa19.27■□□□□ 0.68
PCF11-207ENST00000624931 B4GALNT4Q76KP1 1039 aa19.27■□□□□ 0.68
PCF11-207ENST00000624931 SV2BQ7L1I2 683 aa19.27■□□□□ 0.68
PCF11-207ENST00000624931 ANKRD23Q86SG2 305 aa19.27■□□□□ 0.68
PCF11-207ENST00000624931 SUGP1Q8IWZ8 645 aaKnown RBP19.27■□□□□ 0.68
PCF11-207ENST00000624931 IFT20Q8IY31 132 aa19.27■□□□□ 0.68
PCF11-207ENST00000624931 SLC5A5Q92911 643 aa19.27■□□□□ 0.68
PCF11-207ENST00000624931 FAM20AQ96MK3 541 aa19.27■□□□□ 0.68
PCF11-207ENST00000624931 NDST4Q9H3R1 872 aa19.27■□□□□ 0.68
PCF11-207ENST00000624931 RABGAP1Q9Y3P9 1069 aa19.27■□□□□ 0.68
PCF11-207ENST00000624931 EML1O00423 815 aa19.26■□□□□ 0.67
PCF11-207ENST00000624931 EIF3HO15372 352 aaKnown RBP eCLIP19.26■□□□□ 0.67
PCF11-207ENST00000624931 CHMP2AO43633 222 aa19.26■□□□□ 0.67
PCF11-207ENST00000624931 AKR1B10O60218 316 aa19.26■□□□□ 0.67
PCF11-207ENST00000624931 FSTL1Q12841 308 aa19.26■□□□□ 0.67
PCF11-207ENST00000624931 CFAP221Q4G0U5 840 aa19.26■□□□□ 0.67
PCF11-207ENST00000624931 LRCH2Q5VUJ6 765 aa19.26■□□□□ 0.67
PCF11-207ENST00000624931 KRT79Q5XKE5 535 aa19.26■□□□□ 0.67
PCF11-207ENST00000624931 UNC13DQ70J99 1090 aa19.26■□□□□ 0.67
PCF11-207ENST00000624931 SAPCD2Q86UD0 394 aa19.26■□□□□ 0.67
PCF11-207ENST00000624931 GUF1Q8N442 669 aaKnown RBP19.26■□□□□ 0.67
PCF11-207ENST00000624931 SMCR8Q8TEV9 937 aaPredicted RBP19.26■□□□□ 0.67
PCF11-207ENST00000624931 NOX5Q96PH1 765 aa19.26■□□□□ 0.67
PCF11-207ENST00000624931 ZNF577Q9BSK1 485 aa19.26■□□□□ 0.67
PCF11-207ENST00000624931 PNMA3Q9UL41 463 aa19.26■□□□□ 0.67
PCF11-207ENST00000624931 POTEB3A0JP26 581 aa19.25■□□□□ 0.67
PCF11-207ENST00000624931 GRID2IPA4D2P6 1211 aa19.25■□□□□ 0.67
PCF11-207ENST00000624931 VGLL3A8MV65 326 aa19.25■□□□□ 0.67
PCF11-207ENST00000624931 DDX39AO00148 427 aaKnown RBP19.25■□□□□ 0.67
PCF11-207ENST00000624931 MED24O75448 989 aa19.25■□□□□ 0.67
PCF11-207ENST00000624931 MAGEA1P43355 309 aa19.25■□□□□ 0.67
PCF11-207ENST00000624931 ERVK-9P63128 1117 aa19.25■□□□□ 0.67
PCF11-207ENST00000624931 SETQ01105 290 aaPredicted RBP19.25■□□□□ 0.67
PCF11-207ENST00000624931 CYP27A1Q02318 531 aa19.25■□□□□ 0.67
PCF11-207ENST00000624931 STK4Q13043 487 aa19.25■□□□□ 0.67
PCF11-207ENST00000624931 TMEM119Q4V9L6 283 aa19.25■□□□□ 0.67
PCF11-207ENST00000624931 WDR78Q5VTH9 848 aa19.25■□□□□ 0.67
PCF11-207ENST00000624931 POTEBQ6S5H4 581 aa19.25■□□□□ 0.67
PCF11-207ENST00000624931 TSG101Q99816 390 aa19.25■□□□□ 0.67
PCF11-207ENST00000624931 LRRC1Q9BTT6 524 aa19.25■□□□□ 0.67
PCF11-207ENST00000624931 PORCNQ9H237 461 aa19.25■□□□□ 0.67
PCF11-207ENST00000624931 BLOC1S4Q9NUP1 217 aa19.25■□□□□ 0.67
PCF11-207ENST00000624931 SRRM3A6NNA2 597 aaPredicted RBP19.25■□□□□ 0.67
PCF11-207ENST00000624931 RBAK-RBAKDNI3L0D1 243 aa19.25■□□□□ 0.67
PCF11-207ENST00000624931 ZNF263O14978 683 aa19.25■□□□□ 0.67
PCF11-207ENST00000624931 PSMD10O75832 226 aa19.25■□□□□ 0.67
PCF11-207ENST00000624931 NR3C2P08235 984 aa19.25■□□□□ 0.67
PCF11-207ENST00000624931 MYBL2P10244 700 aa19.25■□□□□ 0.67
PCF11-207ENST00000624931 EMC10Q5UCC4 262 aa19.25■□□□□ 0.67
PCF11-207ENST00000624931 ANKRD13CQ8N6S4 541 aa19.25■□□□□ 0.67
PCF11-207ENST00000624931 EIF1ADQ8N9N8 165 aaKnown RBP19.25■□□□□ 0.67
PCF11-207ENST00000624931 CDK5RAP3Q96JB5 506 aa19.25■□□□□ 0.67
PCF11-207ENST00000624931 YY1AP1Q9H869 796 aa19.25■□□□□ 0.67
PCF11-207ENST00000624931 KCNH7Q9NS40 1196 aa19.25■□□□□ 0.67
PCF11-207ENST00000624931 ARHGAP20Q9P2F6 1191 aa19.25■□□□□ 0.67
PCF11-207ENST00000624931 FBXO40Q9UH90 709 aa19.25■□□□□ 0.67
PCF11-207ENST00000624931 TESPA1A2RU30 521 aaPredicted RBP19.24■□□□□ 0.67
PCF11-207ENST00000624931 ZEB2O60315 1214 aa19.24■□□□□ 0.67
PCF11-207ENST00000624931 GAS7O60861 476 aa19.24■□□□□ 0.67
PCF11-207ENST00000624931 ZMYND10O75800 440 aa19.24■□□□□ 0.67
PCF11-207ENST00000624931 CCND2P30279 289 aa19.24■□□□□ 0.67
PCF11-207ENST00000624931 EIF4A3P38919 411 aaKnown RBP19.24■□□□□ 0.67
PCF11-207ENST00000624931 USP8P40818 1118 aa19.24■□□□□ 0.67
PCF11-207ENST00000624931 ITGB3BPQ13352 177 aaPredicted RBP19.24■□□□□ 0.67
PCF11-207ENST00000624931 RGMBQ6NW40 437 aa19.24■□□□□ 0.67
PCF11-207ENST00000624931 C8orf74Q6P047 294 aa19.24■□□□□ 0.67
PCF11-207ENST00000624931 CD302Q8IX05 232 aa19.24■□□□□ 0.67
PCF11-207ENST00000624931 MREGQ8N565 214 aa19.24■□□□□ 0.67
PCF11-207ENST00000624931 NSUN6Q8TEA1 469 aaKnown RBP19.24■□□□□ 0.67
PCF11-207ENST00000624931 UNC45AQ9H3U1 944 aa19.24■□□□□ 0.67
PCF11-207ENST00000624931 AGO4Q9HCK5 861 aaKnown RBP19.24■□□□□ 0.67
PCF11-207ENST00000624931 TFR2Q9UP52 801 aa19.24■□□□□ 0.67
PCF11-207ENST00000624931 DUSP10Q9Y6W6 482 aa19.24■□□□□ 0.67
PCF11-207ENST00000624931 LRRC37A2A6NM11 1700 aa19.24■□□□□ 0.67
PCF11-207ENST00000624931 POTEFA5A3E0 1075 aa19.23■□□□□ 0.67
PCF11-207ENST00000624931 SOWAHBA6NEL2 793 aa19.23■□□□□ 0.67
PCF11-207ENST00000624931 IPO5O00410 1097 aaKnown RBP19.23■□□□□ 0.67
PCF11-207ENST00000624931 PGK2P07205 417 aa19.23■□□□□ 0.67
PCF11-207ENST00000624931 KLK7P49862 253 aa19.23■□□□□ 0.67
PCF11-207ENST00000624931 PAK2Q13177 524 aa19.23■□□□□ 0.67
PCF11-207ENST00000624931 MTMR1Q13613 665 aa19.23■□□□□ 0.67
PCF11-207ENST00000624931 POTEGQ6S5H5 508 aa19.23■□□□□ 0.67
PCF11-207ENST00000624931 VSIG10LQ86VR7 867 aa19.23■□□□□ 0.67
PCF11-207ENST00000624931 RIN2Q8WYP3 895 aaPredicted RBP19.23■□□□□ 0.67
PCF11-207ENST00000624931 SEMA6BQ9H3T3 888 aa19.23■□□□□ 0.67
PCF11-207ENST00000624931 SLC45A1Q9Y2W3 748 aa19.23■□□□□ 0.67
PCF11-207ENST00000624931 PFASO15067 1338 aa19.23■□□□□ 0.67
PCF11-207ENST00000624931 IGF2BP3O00425 579 aaKnown RBP eCLIP19.22■□□□□ 0.67
PCF11-207ENST00000624931 MOCS3O95396 460 aa19.22■□□□□ 0.67
PCF11-207ENST00000624931 SLC25A27O95847 323 aa19.22■□□□□ 0.67
PCF11-207ENST00000624931 CYP4A11Q02928 519 aa19.22■□□□□ 0.67
PCF11-207ENST00000624931 HAUS3Q68CZ6 603 aa19.22■□□□□ 0.67
PCF11-207ENST00000624931 PDXDC1Q6P996 788 aa19.22■□□□□ 0.67
PCF11-207ENST00000624931 MICALCLQ6ZW33 695 aa19.22■□□□□ 0.67
PCF11-207ENST00000624931 OTOP1Q7RTM1 612 aa19.22■□□□□ 0.67
PCF11-207ENST00000624931 NIPA1Q7RTP0 329 aa19.22■□□□□ 0.67
PCF11-207ENST00000624931 PACS2Q86VP3 889 aa19.22■□□□□ 0.67
PCF11-207ENST00000624931 CAPN6Q9Y6Q1 641 aa19.22■□□□□ 0.67
PCF11-207ENST00000624931 KIAA1217Q5T5P2 1943 aa19.22■□□□□ 0.67
PCF11-207ENST00000624931 CES2O00748 559 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms