RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 DLGAP2Q9P1A6 1054 aa10.56□□□□□ -0.72
COL4A6-210ENST00000621266 TMA7Q9Y2S6 64 aaKnown RBP10.56□□□□□ -0.72
COL4A6-210ENST00000621266 CAB39Q9Y376 341 aaPredicted RBP10.56□□□□□ -0.72
COL4A6-210ENST00000621266 PREX2Q70Z35 1606 aa10.56□□□□□ -0.72
COL4A6-210ENST00000621266 ZSCAN9O15535 394 aaPredicted RBP10.56□□□□□ -0.72
COL4A6-210ENST00000621266 AURKCQ9UQB9 309 aa10.56□□□□□ -0.72
COL4A6-210ENST00000621266 ERBB3P21860 1342 aa10.56□□□□□ -0.72
COL4A6-210ENST00000621266 ANKARQ7Z5J8 1434 aa10.56□□□□□ -0.72
COL4A6-210ENST00000621266 ANP32DO95626 131 aa10.56□□□□□ -0.72
COL4A6-210ENST00000621266 SERPINB1P30740 379 aa10.56□□□□□ -0.72
COL4A6-210ENST00000621266 VCPP55072 806 aaKnown RBP10.56□□□□□ -0.72
COL4A6-210ENST00000621266 MED21Q13503 144 aa10.56□□□□□ -0.72
COL4A6-210ENST00000621266 MORF4L2Q15014 288 aa10.56□□□□□ -0.72
COL4A6-210ENST00000621266 RTKN2Q8IZC4 609 aa10.56□□□□□ -0.72
COL4A6-210ENST00000621266 ZNF473Q8WTR7 871 aaKnown RBP10.56□□□□□ -0.72
COL4A6-210ENST00000621266 RTEL1Q9NZ71 1219 aa10.56□□□□□ -0.72
COL4A6-210ENST00000621266 A0A0D9SFI3 127 aa10.56□□□□□ -0.72
COL4A6-210ENST00000621266 XPO1O14980 1071 aaKnown RBP10.56□□□□□ -0.72
COL4A6-210ENST00000621266 CLIC2O15247 247 aa10.56□□□□□ -0.72
COL4A6-210ENST00000621266 CYP2C19P33261 490 aa10.56□□□□□ -0.72
COL4A6-210ENST00000621266 SOX5P35711 763 aa10.56□□□□□ -0.72
COL4A6-210ENST00000621266 NSUN2Q08J23 767 aaKnown RBP eCLIP10.56□□□□□ -0.723e-9■■■■■ 39.7
COL4A6-210ENST00000621266 SZRD1Q7Z422 152 aa10.56□□□□□ -0.72
COL4A6-210ENST00000621266 EXOC8Q8IYI6 725 aa10.56□□□□□ -0.72
COL4A6-210ENST00000621266 OMA1Q96E52 524 aa10.56□□□□□ -0.72
COL4A6-210ENST00000621266 ATP6V1G3Q96LB4 118 aa10.56□□□□□ -0.72
COL4A6-210ENST00000621266 PPP1R16BQ96T49 567 aa10.56□□□□□ -0.72
COL4A6-210ENST00000621266 XDHP47989 1333 aa10.56□□□□□ -0.72
COL4A6-210ENST00000621266 ENO1P06733 434 aaKnown RBP10.56□□□□□ -0.72
COL4A6-210ENST00000621266 ATP1A3P13637 1013 aa10.56□□□□□ -0.72
COL4A6-210ENST00000621266 XKR9Q5GH70 373 aa10.56□□□□□ -0.72
COL4A6-210ENST00000621266 OSBPL9Q96SU4 736 aa10.56□□□□□ -0.72
COL4A6-210ENST00000621266 HACD3Q9P035 362 aa10.56□□□□□ -0.72
COL4A6-210ENST00000621266 CD2BP2O95400 341 aaKnown RBP10.55□□□□□ -0.72
COL4A6-210ENST00000621266 HSPA6P17066 643 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 S100A5P33763 92 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 LAMB3Q13751 1172 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 TBCCQ15814 346 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 KLC3Q6P597 504 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 APOA5Q6Q788 366 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 EEPD1Q7L9B9 569 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 FAF2Q96CS3 445 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 ZBTB18Q99592 522 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 APOL6Q9BWW8 343 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 TRIM8Q9BZR9 551 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 BRD8Q9H0E9 1235 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 AP5M1Q9H0R1 490 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 C6orf203Q9P0P8 240 aaPredicted RBP10.55□□□□□ -0.72
COL4A6-210ENST00000621266 CDV3Q9UKY7 258 aaKnown RBP10.55□□□□□ -0.72
COL4A6-210ENST00000621266 SHROOM2Q13796 1616 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 TSC22D2O75157 780 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 PDE5AO76074 875 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 PDE8BO95263 885 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 HADHAP40939 763 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 MAN2A1Q16706 1144 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 ZNF658Q5TYW1 1059 aaPredicted RBP10.55□□□□□ -0.72
COL4A6-210ENST00000621266 CCDC103Q8IW40 242 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 SYNE4Q8N205 404 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 CHURC1Q8WUH1 139 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 MASTLQ96GX5 879 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 NT5C1BQ96P26 610 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 UBE2TQ9NPD8 197 aaPredicted RBP10.55□□□□□ -0.72
COL4A6-210ENST00000621266 TRIM33Q9UPN9 1127 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 ARIH1Q9Y4X5 557 aaPredicted RBP10.55□□□□□ -0.72
COL4A6-210ENST00000621266 PRR36Q9H6K5 1346 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 KCNQ2O43526 872 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 CIAO1O76071 339 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 ALDH18A1P54886 795 aaKnown RBP10.55□□□□□ -0.72
COL4A6-210ENST00000621266 KRT17Q04695 432 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 RABGAP1LQ5R372 815 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 PPP1R36Q96LQ0 422 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 GID8Q9NWU2 228 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 GCNT4Q9P109 453 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 LRFN2Q9ULH4 789 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 A0A1W2PQ27 194 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 A0A1W2PQ64 194 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 A0A1W2PQD8 194 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 IPO5O00410 1097 aaKnown RBP10.55□□□□□ -0.72
COL4A6-210ENST00000621266 TMEM191BP0C7N4 346 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 CHRNA5P30532 468 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 EZH2Q15910 746 aaKnown RBP10.55□□□□□ -0.72
COL4A6-210ENST00000621266 PROSER3Q2NL68 480 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 GPR108Q9NPR9 543 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 UBAP1Q9NZ09 502 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 MID2Q9UJV3 735 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 BRAFP15056 766 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 KDSRQ06136 332 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 ABCB5Q2M3G0 1257 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 CYGBQ8WWM9 190 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 HSPH1Q92598 858 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 ZSCAN10Q96SZ4 725 aaPredicted RBP10.55□□□□□ -0.72
COL4A6-210ENST00000621266 ZWILCHQ9H900 591 aa10.55□□□□□ -0.72
COL4A6-210ENST00000621266 MRPL40Q9NQ50 206 aaKnown RBP10.55□□□□□ -0.72
COL4A6-210ENST00000621266 DLGAP3O95886 979 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 MYL3P08590 195 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 ATXN3P54252 364 aaPredicted RBP10.54□□□□□ -0.72
COL4A6-210ENST00000621266 HIC1Q14526 733 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 HIF1AQ16665 826 aa10.54□□□□□ -0.72
COL4A6-210ENST00000621266 CDR2LQ86X02 465 aaPredicted RBP10.54□□□□□ -0.72
COL4A6-210ENST00000621266 AGR3Q8TD06 166 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms