RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 TNNQ9UQP3 1299 aa7.65□□□□□ -1.19
COLCA1-205ENST00000620864 ARAP3Q8WWN8 1544 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 MYL7Q01449 175 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 ITKQ08881 620 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 TRIM16LQ309B1 348 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 AASDHQ4L235 1098 aaPredicted RBP7.64□□□□□ -1.19
COLCA1-205ENST00000620864 PRUNE1Q86TP1 453 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 SPDYE1Q8NFV5 336 aaPredicted RBP7.64□□□□□ -1.19
COLCA1-205ENST00000620864 SNX25Q9H3E2 840 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 SLITRK6Q9H5Y7 841 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 ECT2Q9H8V3 914 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 MAPK8IP1Q9UQF2 711 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 AP3B1O00203 1094 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 SLC9A1P19634 815 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 TJAP1Q5JTD0 557 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 GPBP1Q86WP2 473 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 THAP9Q9H5L6 903 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 DNAJC6O75061 913 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 RPS8P62241 208 aaKnown RBP7.64□□□□□ -1.19
COLCA1-205ENST00000620864 SURF1Q15526 300 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 COQ7Q99807 217 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 ELAC2Q9BQ52 826 aaKnown RBP7.64□□□□□ -1.19
COLCA1-205ENST00000620864 CCDC90BQ9GZT6 254 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 POLIQ9UNA4 740 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 GMEB1Q9Y692 573 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.64□□□□□ -1.19
COLCA1-205ENST00000620864 A0A0G2JLW4 131 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 hCG_1984214I3L0E3 225 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 OCM2P0CE71 109 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 OCMP0CE72 109 aaPredicted RBP7.64□□□□□ -1.19
COLCA1-205ENST00000620864 LIG4P49917 911 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 COPS2P61201 443 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 YWHAHQ04917 246 aaPredicted RBP7.64□□□□□ -1.19
COLCA1-205ENST00000620864 TTBK2Q6IQ55 1244 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 SCYL2Q6P3W7 929 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 SETD3Q86TU7 594 aaPredicted RBP7.64□□□□□ -1.19
COLCA1-205ENST00000620864 SIKE1Q9BRV8 207 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 TUBGCP2Q9BSJ2 902 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 PIDD1Q9HB75 910 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 USP18Q9UMW8 372 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 KDM4FA0A1W2PPD8 638 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 NLRP11P59045 1033 aaKnown RBP7.64□□□□□ -1.19
COLCA1-205ENST00000620864 DPYDQ12882 1025 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 NLRP14Q86W24 1093 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 KCNK16Q96T55 309 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 CYP26B1Q9NR63 512 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 RWDD2AQ9UIY3 292 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 PTPN22Q9Y2R2 807 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 V9GY48 417 aaPredicted RBP7.64□□□□□ -1.19
COLCA1-205ENST00000620864 PLEKHG3A1L390 1219 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 M0R3G1 203 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 PIK3R2O00459 728 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 ASAP2O43150 1006 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 PHKG2P15735 406 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 MFSD14BQ5SR56 506 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 RBM41Q96IZ5 413 aaKnown RBP7.64□□□□□ -1.19
COLCA1-205ENST00000620864 HIC2Q96JB3 615 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 PRPF18Q99633 342 aaKnown RBP7.64□□□□□ -1.19
COLCA1-205ENST00000620864 ST7Q9NRC1 585 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 ZSCAN32Q9NX65 697 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 AATFQ9NY61 560 aaKnown RBP eCLIP7.64□□□□□ -1.19
COLCA1-205ENST00000620864 NCDNQ9UBB6 729 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 INTUQ9ULD6 942 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 RWDD3Q9Y3V2 267 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 SLC4A7Q9Y6M7 1214 aa7.64□□□□□ -1.19
COLCA1-205ENST00000620864 ADAM9Q13443 819 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 C16orf89Q6UX73 402 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 DNAAF3Q8N9W5 541 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 TUBA8Q9NY65 449 aaPredicted RBP7.63□□□□□ -1.19
COLCA1-205ENST00000620864 PSD3Q9NYI0 1048 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 HECW2Q9P2P5 1572 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 CFAP43Q8NDM7 1665 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 MEFVO15553 781 aaPredicted RBP7.63□□□□□ -1.19
COLCA1-205ENST00000620864 ORC4O43929 436 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 AFPP02771 609 aaKnown RBP7.63□□□□□ -1.19
COLCA1-205ENST00000620864 SAT1P21673 171 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 SOX6P35712 828 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 PSMC2P35998 433 aaKnown RBP7.63□□□□□ -1.19
COLCA1-205ENST00000620864 PMS2P54278 862 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 SF3A3Q12874 501 aaKnown RBP eCLIP7.63□□□□□ -1.19
COLCA1-205ENST00000620864 PLAAQ9Y263 795 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 ZMYM6O95789 1325 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 ZMYM4Q5VZL5 1548 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 GAS7O60861 476 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 RALBP11234 206 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 ARFIP2P53365 341 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 PTK2BQ14289 1009 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 CDC37L1Q7L3B6 337 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 CNOT6LQ96LI5 555 aaKnown RBP7.63□□□□□ -1.19
COLCA1-205ENST00000620864 NDEL1Q9GZM8 345 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 SCN3BQ9NY72 215 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 SMG5Q9UPR3 1016 aaKnown RBP7.63□□□□□ -1.19
COLCA1-205ENST00000620864 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.63□□□□□ -1.19
COLCA1-205ENST00000620864 ERCC6L2Q5T890 1561 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 OR52Z1P0C646 297 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 TCF3P15923 654 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 IKBIPQ70UQ0 350 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 MCUQ8NE86 351 aa7.63□□□□□ -1.19
COLCA1-205ENST00000620864 ALKBH8Q96BT7 664 aaKnown RBP7.63□□□□□ -1.19
COLCA1-205ENST00000620864 MASTLQ96GX5 879 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms