RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 TMEM39AQ9NV64 488 aa15.15■□□□□ 0.02
NEK3-210ENST00000620675 KBTBD4Q9NVX7 518 aa15.15■□□□□ 0.02
NEK3-210ENST00000620675 SMIM35A0A1B0GVV1 85 aa15.15■□□□□ 0.02
NEK3-210ENST00000620675 MAGEB2O15479 319 aa15.15■□□□□ 0.02
NEK3-210ENST00000620675 CSDE1O75534 798 aaKnown RBP15.15■□□□□ 0.02
NEK3-210ENST00000620675 CHRNA1P02708 482 aa15.15■□□□□ 0.02
NEK3-210ENST00000620675 PRR29P0C7W0 189 aa15.15■□□□□ 0.02
NEK3-210ENST00000620675 CKBP12277 381 aa15.15■□□□□ 0.02
NEK3-210ENST00000620675 RFC5P40937 340 aa15.15■□□□□ 0.02
NEK3-210ENST00000620675 MBTPS1Q14703 1052 aa15.15■□□□□ 0.02
NEK3-210ENST00000620675 CSPP1Q1MSJ5 1256 aa15.15■□□□□ 0.02
NEK3-210ENST00000620675 KIZQ2M2Z5 673 aa15.15■□□□□ 0.02
NEK3-210ENST00000620675 FAM102BQ5T8I3 360 aa15.15■□□□□ 0.02
NEK3-210ENST00000620675 GPT2Q8TD30 523 aa15.15■□□□□ 0.02
NEK3-210ENST00000620675 PRPF31Q8WWY3 499 aaKnown RBP15.15■□□□□ 0.02
NEK3-210ENST00000620675 DPF3Q92784 378 aa15.15■□□□□ 0.02
NEK3-210ENST00000620675 ERCC4Q92889 916 aaPredicted RBP15.15■□□□□ 0.02
NEK3-210ENST00000620675 SCLYQ96I15 445 aa15.15■□□□□ 0.02
NEK3-210ENST00000620675 POLR3FQ9H1D9 316 aaPredicted RBP15.15■□□□□ 0.02
NEK3-210ENST00000620675 BLZF1Q9H2G9 400 aa15.15■□□□□ 0.02
NEK3-210ENST00000620675 SUCLA2Q9P2R7 463 aaPredicted RBP15.15■□□□□ 0.02
NEK3-210ENST00000620675 ZMYND8Q9ULU4 1186 aaPredicted RBP15.15■□□□□ 0.02
NEK3-210ENST00000620675 AKT3Q9Y243 479 aa15.15■□□□□ 0.02
NEK3-210ENST00000620675 GINS2Q9Y248 185 aa15.15■□□□□ 0.02
NEK3-210ENST00000620675 TLR3O15455 904 aaKnown RBP15.14■□□□□ 0.01
NEK3-210ENST00000620675 HIP1RO75146 1068 aa15.14■□□□□ 0.01
NEK3-210ENST00000620675 MCM4P33991 863 aa15.14■□□□□ 0.01
NEK3-210ENST00000620675 CCL23P55773 120 aa15.14■□□□□ 0.01
NEK3-210ENST00000620675 FAM160A1Q05DH4 1040 aa15.14■□□□□ 0.01
NEK3-210ENST00000620675 GPNMBQ14956 572 aa15.14■□□□□ 0.01
NEK3-210ENST00000620675 SV2BQ7L1I2 683 aa15.14■□□□□ 0.01
NEK3-210ENST00000620675 RHPN2Q8IUC4 686 aa15.14■□□□□ 0.01
NEK3-210ENST00000620675 DDX12PQ92771 950 aa15.14■□□□□ 0.01
NEK3-210ENST00000620675 DNAJC19Q96DA6 116 aa15.14■□□□□ 0.01
NEK3-210ENST00000620675 HIPK3Q9H422 1215 aa15.14■□□□□ 0.01
NEK3-210ENST00000620675 EVI5O60447 810 aa15.13■□□□□ 0.01
NEK3-210ENST00000620675 SLFN14P0C7P3 912 aa15.13■□□□□ 0.01
NEK3-210ENST00000620675 GLRA2P23416 452 aa15.13■□□□□ 0.01
NEK3-210ENST00000620675 ARL2P36404 184 aa15.13■□□□□ 0.01
NEK3-210ENST00000620675 CUL4BQ13620 913 aa15.13■□□□□ 0.01
NEK3-210ENST00000620675 GIT2Q14161 759 aa15.13■□□□□ 0.01
NEK3-210ENST00000620675 TAF2Q6P1X5 1199 aa15.13■□□□□ 0.01
NEK3-210ENST00000620675 KRBA2Q6ZNG9 492 aa15.13■□□□□ 0.01
NEK3-210ENST00000620675 RETREG2Q8NC44 543 aa15.13■□□□□ 0.01
NEK3-210ENST00000620675 TMEM40Q8WWA1 233 aa15.13■□□□□ 0.01
NEK3-210ENST00000620675 PAGE5Q96GU1 130 aa15.13■□□□□ 0.01
NEK3-210ENST00000620675 KIFC3Q9BVG8 833 aa15.13■□□□□ 0.01
NEK3-210ENST00000620675 SEZ6LQ9BYH1 1024 aa15.13■□□□□ 0.01
NEK3-210ENST00000620675 DACT1Q9NYF0 836 aa15.13■□□□□ 0.01
NEK3-210ENST00000620675 GPR32O75388 356 aa15.13■□□□□ 0.01
NEK3-210ENST00000620675 NLRP11P59045 1033 aaKnown RBP15.13■□□□□ 0.01
NEK3-210ENST00000620675 MGAT3Q09327 533 aa15.13■□□□□ 0.01
NEK3-210ENST00000620675 LAMTOR4Q0VGL1 99 aa15.13■□□□□ 0.01
NEK3-210ENST00000620675 VWCEQ96DN2 955 aa15.13■□□□□ 0.01
NEK3-210ENST00000620675 HTATIP2Q9BUP3 242 aa15.13■□□□□ 0.01
NEK3-210ENST00000620675 CDY2AQ9Y6F7 541 aa15.13■□□□□ 0.01
NEK3-210ENST00000620675 ADGRA3Q8IWK6 1321 aa15.12■□□□□ 0.01
NEK3-210ENST00000620675 SRGAP2CP0DJJ0 459 aa15.12■□□□□ 0.01
NEK3-210ENST00000620675 GUCY2CP25092 1073 aa15.12■□□□□ 0.01
NEK3-210ENST00000620675 GPC3P51654 580 aa15.12■□□□□ 0.01
NEK3-210ENST00000620675 CAPSQ13938 189 aa15.12■□□□□ 0.01
NEK3-210ENST00000620675 KCTD17Q8N5Z5 321 aa15.12■□□□□ 0.01
NEK3-210ENST00000620675 HPS3Q969F9 1004 aa15.12■□□□□ 0.01
NEK3-210ENST00000620675 NLRP4Q96MN2 994 aa15.12■□□□□ 0.01
NEK3-210ENST00000620675 OSMRQ99650 979 aa15.12■□□□□ 0.01
NEK3-210ENST00000620675 TRIM9Q9C026 710 aa15.12■□□□□ 0.01
NEK3-210ENST00000620675 ADAMTS10Q9H324 1103 aa15.12■□□□□ 0.01
NEK3-210ENST00000620675 PPME1Q9Y570 386 aa15.12■□□□□ 0.01
NEK3-210ENST00000620675 COL4A3BPQ9Y5P4 624 aa15.12■□□□□ 0.01
NEK3-210ENST00000620675 A0A087WZ62 844 aa15.12■□□□□ 0.01
NEK3-210ENST00000620675 KIAA0355O15063 1070 aa15.12■□□□□ 0.01
NEK3-210ENST00000620675 RGS19P49795 217 aa15.12■□□□□ 0.01
NEK3-210ENST00000620675 MRPS6P82932 125 aaKnown RBP15.12■□□□□ 0.01
NEK3-210ENST00000620675 IER5Q5VY09 327 aa15.12■□□□□ 0.01
NEK3-210ENST00000620675 CEP57L1Q8IYX8 460 aa15.12■□□□□ 0.01
NEK3-210ENST00000620675 CNNM3Q8NE01 707 aa15.12■□□□□ 0.01
NEK3-210ENST00000620675 MCPH1Q8NEM0 835 aa15.12■□□□□ 0.01
NEK3-210ENST00000620675 PSPC1Q8WXF1 523 aaKnown RBP15.12■□□□□ 0.01
NEK3-210ENST00000620675 FDXACB1Q9BRP7 624 aaPredicted RBP15.12■□□□□ 0.01
NEK3-210ENST00000620675 TNMDQ9H2S6 317 aa15.12■□□□□ 0.01
NEK3-210ENST00000620675 MINDY3Q9H8M7 445 aa15.12■□□□□ 0.01
NEK3-210ENST00000620675 FGFR4P22455 802 aa15.11■□□□□ 0.01
NEK3-210ENST00000620675 TMOD1P28289 359 aa15.11■□□□□ 0.01
NEK3-210ENST00000620675 MDM2Q00987 491 aaPredicted RBP15.11■□□□□ 0.01
NEK3-210ENST00000620675 RBL2Q08999 1139 aa15.11■□□□□ 0.01
NEK3-210ENST00000620675 PNOCQ13519 176 aa15.11■□□□□ 0.01
NEK3-210ENST00000620675 RPAINQ86UA6 219 aa15.11■□□□□ 0.01
NEK3-210ENST00000620675 MAP7D2Q96T17 732 aa15.11■□□□□ 0.01
NEK3-210ENST00000620675 FGFBP2Q9BYJ0 223 aa15.11■□□□□ 0.01
NEK3-210ENST00000620675 CUEDC2Q9H467 287 aa15.11■□□□□ 0.01
NEK3-210ENST00000620675 IFT122Q9HBG6 1241 aa15.11■□□□□ 0.01
NEK3-210ENST00000620675 MICAL3Q7RTP6 2002 aa15.11■□□□□ 0.01
NEK3-210ENST00000620675 NBNO60934 754 aa15.1■□□□□ 0.01
NEK3-210ENST00000620675 KRT18P05783 430 aaKnown RBP15.1■□□□□ 0.01
NEK3-210ENST00000620675 IQCF3P0C7M6 154 aa15.1■□□□□ 0.01
NEK3-210ENST00000620675 TCTN1Q2MV58 587 aa15.1■□□□□ 0.01
NEK3-210ENST00000620675 LRRC8DQ7L1W4 858 aa15.1■□□□□ 0.01
NEK3-210ENST00000620675 RNF149Q8NC42 400 aa15.1■□□□□ 0.01
NEK3-210ENST00000620675 GLIS3Q8NEA6 775 aa15.1■□□□□ 0.01
NEK3-210ENST00000620675 CAGE1Q8TC20 777 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms