RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 NFKBIBQ15653 356 aa10.36□□□□□ -0.75
SYN3-213ENST00000619146 PCNX4Q63HM2 1172 aa10.36□□□□□ -0.75
SYN3-213ENST00000619146 CYFIP1Q7L576 1253 aa10.36□□□□□ -0.75
SYN3-213ENST00000619146 NIPA1Q7RTP0 329 aa10.36□□□□□ -0.75
SYN3-213ENST00000619146 KRI1Q8N9T8 703 aaKnown RBP10.36□□□□□ -0.75
SYN3-213ENST00000619146 ZNF579Q8NAF0 562 aaKnown RBP10.36□□□□□ -0.75
SYN3-213ENST00000619146 ATOH1Q92858 354 aaPredicted RBP10.36□□□□□ -0.75
SYN3-213ENST00000619146 PGBD1Q96JS3 809 aa10.36□□□□□ -0.75
SYN3-213ENST00000619146 MBOAT7Q96N66 472 aa10.36□□□□□ -0.75
SYN3-213ENST00000619146 GDPD2Q9HCC8 539 aa10.36□□□□□ -0.75
SYN3-213ENST00000619146 TLR9Q9NR96 1032 aa10.36□□□□□ -0.75
SYN3-213ENST00000619146 CLEC1BQ9P126 229 aa10.36□□□□□ -0.75
SYN3-213ENST00000619146 DDX25Q9UHL0 483 aaKnown RBP10.36□□□□□ -0.75
SYN3-213ENST00000619146 TBX3O15119 743 aa10.35□□□□□ -0.75
SYN3-213ENST00000619146 OR52Z1P0C646 297 aa10.35□□□□□ -0.75
SYN3-213ENST00000619146 MARK3P27448 753 aa10.35□□□□□ -0.75
SYN3-213ENST00000619146 CCND2P30279 289 aa10.35□□□□□ -0.75
SYN3-213ENST00000619146 SETQ01105 290 aaPredicted RBP10.35□□□□□ -0.75
SYN3-213ENST00000619146 CALCRLQ16602 461 aa10.35□□□□□ -0.75
SYN3-213ENST00000619146 Q4G0T1 1027 aa10.35□□□□□ -0.75
SYN3-213ENST00000619146 CEP55Q53EZ4 464 aa10.35□□□□□ -0.75
SYN3-213ENST00000619146 ADALQ6DHV7 355 aa10.35□□□□□ -0.75
SYN3-213ENST00000619146 VSIG10LQ86VR7 867 aa10.35□□□□□ -0.75
SYN3-213ENST00000619146 FBXL6Q8N531 539 aa10.35□□□□□ -0.75
SYN3-213ENST00000619146 LMBR1Q8WVP7 490 aa10.35□□□□□ -0.75
SYN3-213ENST00000619146 MSLNLQ96KJ4 702 aa10.35□□□□□ -0.75
SYN3-213ENST00000619146 FAM20AQ96MK3 541 aa10.35□□□□□ -0.75
SYN3-213ENST00000619146 LMAN2LQ9H0V9 348 aa10.35□□□□□ -0.75
SYN3-213ENST00000619146 PLAGL2Q9UPG8 496 aa10.35□□□□□ -0.75
SYN3-213ENST00000619146 USP15Q9Y4E8 981 aaPredicted RBP10.35□□□□□ -0.75
SYN3-213ENST00000619146 SRPRBQ9Y5M8 271 aaKnown RBP10.35□□□□□ -0.75
SYN3-213ENST00000619146 MRPL42Q9Y6G3 142 aaKnown RBP10.35□□□□□ -0.75
SYN3-213ENST00000619146 A0A1W2PQ27 194 aa10.34□□□□□ -0.75
SYN3-213ENST00000619146 A0A1W2PQ64 194 aa10.34□□□□□ -0.75
SYN3-213ENST00000619146 A0A1W2PQD8 194 aa10.34□□□□□ -0.75
SYN3-213ENST00000619146 C5orf67F2Z3F1 127 aa10.34□□□□□ -0.75
SYN3-213ENST00000619146 MEIS1O00470 390 aa10.34□□□□□ -0.75
SYN3-213ENST00000619146 WNT7AO00755 349 aa10.34□□□□□ -0.75
SYN3-213ENST00000619146 ENPP3O14638 875 aa10.34□□□□□ -0.75
SYN3-213ENST00000619146 MAFGO15525 162 aa10.34□□□□□ -0.75
SYN3-213ENST00000619146 NCK2O43639 380 aa10.34□□□□□ -0.75
SYN3-213ENST00000619146 EDIL3O43854 480 aa10.34□□□□□ -0.75
SYN3-213ENST00000619146 MARCH6O60337 910 aa10.34□□□□□ -0.75
SYN3-213ENST00000619146 CUTAO60888 179 aa10.34□□□□□ -0.75
SYN3-213ENST00000619146 TDP2O95551 362 aa10.34□□□□□ -0.75
SYN3-213ENST00000619146 GLP2RO95838 553 aa10.34□□□□□ -0.75
SYN3-213ENST00000619146 MBD3O95983 291 aa10.34□□□□□ -0.75
SYN3-213ENST00000619146 ITGB1P05556 798 aa10.34□□□□□ -0.75
SYN3-213ENST00000619146 RB1P06400 928 aa10.34□□□□□ -0.75
SYN3-213ENST00000619146 MARCKSP29966 332 aaPredicted RBP10.34□□□□□ -0.75
SYN3-213ENST00000619146 IGBP1P78318 339 aa10.34□□□□□ -0.75
SYN3-213ENST00000619146 TMEM62Q0P6H9 643 aa10.34□□□□□ -0.75
SYN3-213ENST00000619146 LPIN1Q14693 890 aa10.34□□□□□ -0.75
SYN3-213ENST00000619146 SKOR2Q2VWA4 1001 aaPredicted RBP10.34□□□□□ -0.75
SYN3-213ENST00000619146 PRR16Q569H4 304 aa10.34□□□□□ -0.75
SYN3-213ENST00000619146 DTHD1Q6ZMT9 781 aa10.34□□□□□ -0.75
SYN3-213ENST00000619146 SLFN12Q8IYM2 578 aa10.34□□□□□ -0.75
SYN3-213ENST00000619146 C4orf32Q8N8J7 132 aa10.34□□□□□ -0.75
SYN3-213ENST00000619146 KLHL23Q8NBE8 558 aa10.34□□□□□ -0.75
SYN3-213ENST00000619146 DNAJB3Q8WWF6 145 aa10.34□□□□□ -0.75
SYN3-213ENST00000619146 LINC01599Q8WXQ3 324 aa10.34□□□□□ -0.75
SYN3-213ENST00000619146 APBB2Q92870 758 aa10.34□□□□□ -0.75
SYN3-213ENST00000619146 MTMR9Q96QG7 549 aa10.34□□□□□ -0.75
SYN3-213ENST00000619146 RAB34Q9BZG1 259 aa10.34□□□□□ -0.75
SYN3-213ENST00000619146 LMBRD1Q9NUN5 540 aa10.34□□□□□ -0.75
SYN3-213ENST00000619146 PKD2L1Q9P0L9 805 aa10.34□□□□□ -0.75
SYN3-213ENST00000619146 CDH22Q9UJ99 828 aa10.34□□□□□ -0.75
SYN3-213ENST00000619146 FBXO2Q9UK22 296 aaPredicted RBP10.34□□□□□ -0.75
SYN3-213ENST00000619146 GVINP1Q7Z2Y8 2422 aa10.34□□□□□ -0.75
SYN3-213ENST00000619146 DOCK6Q96HP0 2047 aa10.33□□□□□ -0.76
SYN3-213ENST00000619146 EP300Q09472 2414 aaPredicted RBP10.33□□□□□ -0.76
SYN3-213ENST00000619146 LOC730098B7Z3J9 87 aa10.33□□□□□ -0.76
SYN3-213ENST00000619146 FAM86B1E9PN63 330 aa10.33□□□□□ -0.76
SYN3-213ENST00000619146 SLC37A4O43826 429 aa10.33□□□□□ -0.76
SYN3-213ENST00000619146 FAM86B2P0C5J1 330 aa10.33□□□□□ -0.76
SYN3-213ENST00000619146 CMA1P23946 247 aa10.33□□□□□ -0.76
SYN3-213ENST00000619146 HOXC8P31273 242 aa10.33□□□□□ -0.76
SYN3-213ENST00000619146 CD52P31358 61 aa10.33□□□□□ -0.76
SYN3-213ENST00000619146 LONP1P36776 959 aaKnown RBP10.33□□□□□ -0.76
SYN3-213ENST00000619146 MRPS9P82933 396 aaKnown RBP10.33□□□□□ -0.76
SYN3-213ENST00000619146 SEMA3FQ13275 785 aa10.33□□□□□ -0.76
SYN3-213ENST00000619146 TMEM266Q2M3C6 531 aa10.33□□□□□ -0.76
SYN3-213ENST00000619146 GNPTABQ3T906 1256 aa10.33□□□□□ -0.76
SYN3-213ENST00000619146 KCNV1Q6PIU1 500 aa10.33□□□□□ -0.76
SYN3-213ENST00000619146 BMP8AQ7Z5Y6 402 aa10.33□□□□□ -0.76
SYN3-213ENST00000619146 NLRX1Q86UT6 975 aa10.33□□□□□ -0.76
SYN3-213ENST00000619146 PLA2G4DQ86XP0 818 aa10.33□□□□□ -0.76
SYN3-213ENST00000619146 SPPL3Q8TCT6 385 aa10.33□□□□□ -0.76
SYN3-213ENST00000619146 MICAL1Q8TDZ2 1067 aa10.33□□□□□ -0.76
SYN3-213ENST00000619146 POF1BQ8WVV4 589 aa10.33□□□□□ -0.76
SYN3-213ENST00000619146 CDHR1Q96JP9 859 aa10.33□□□□□ -0.76
SYN3-213ENST00000619146 AK8Q96MA6 479 aa10.33□□□□□ -0.76
SYN3-213ENST00000619146 GPR20Q99678 358 aa10.33□□□□□ -0.76
SYN3-213ENST00000619146 MXRA8Q9BRK3 442 aa10.33□□□□□ -0.76
SYN3-213ENST00000619146 FAM49AQ9H0Q0 323 aaPredicted RBP10.33□□□□□ -0.76
SYN3-213ENST00000619146 AGO3Q9H9G7 860 aaKnown RBP10.33□□□□□ -0.76
SYN3-213ENST00000619146 RC3H2Q9HBD1 1191 aaKnown RBP10.33□□□□□ -0.76
SYN3-213ENST00000619146 KCNMB3Q9NPA1 279 aa10.33□□□□□ -0.76
SYN3-213ENST00000619146 JADE2Q9NQC1 790 aa10.33□□□□□ -0.76
SYN3-213ENST00000619146 HCSTQ9UBK5 93 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms