RNA–Protein interactions for RNA: ENST00000619117.1

C9orf50-202, Transcript of chromosome 9 open reading frame 50, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf50, Length 796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50-202ENST00000619117 TTC38Q5R3I4 469 aa17.07■□□□□ 0.32
C9orf50-202ENST00000619117 OTUD6AQ7L8S5 288 aa17.07■□□□□ 0.32
C9orf50-202ENST00000619117 ZNF410Q86VK4 478 aa17.07■□□□□ 0.32
C9orf50-202ENST00000619117 CMTR2Q8IYT2 770 aaKnown RBP17.07■□□□□ 0.32
C9orf50-202ENST00000619117 NLRP7Q8WX94 980 aa17.07■□□□□ 0.32
C9orf50-202ENST00000619117 SLC7A3Q8WY07 619 aa17.07■□□□□ 0.32
C9orf50-202ENST00000619117 PPM1EQ8WY54 764 aa17.07■□□□□ 0.32
C9orf50-202ENST00000619117 SCLT1Q96NL6 688 aa17.07■□□□□ 0.32
C9orf50-202ENST00000619117 RNF216Q9NWF9 866 aaPredicted RBP17.07■□□□□ 0.32
C9orf50-202ENST00000619117 NOL7Q9UMY1 257 aaKnown RBP17.07■□□□□ 0.32
C9orf50-202ENST00000619117 RWDD3Q9Y3V2 267 aa17.07■□□□□ 0.32
C9orf50-202ENST00000619117 LOXHD1Q8IVV2 1947 aa17.07■□□□□ 0.32
C9orf50-202ENST00000619117 GAS2O43903 313 aaKnown RBP17.06■□□□□ 0.32
C9orf50-202ENST00000619117 SLITRK3O94933 977 aa17.06■□□□□ 0.32
C9orf50-202ENST00000619117 OR52Z1P0C646 297 aa17.06■□□□□ 0.32
C9orf50-202ENST00000619117 POLGP54098 1239 aaPredicted RBP17.06■□□□□ 0.32
C9orf50-202ENST00000619117 BTG3Q14201 252 aaPredicted RBP17.06■□□□□ 0.32
C9orf50-202ENST00000619117 CCDC85BQ15834 202 aaPredicted RBP17.06■□□□□ 0.32
C9orf50-202ENST00000619117 SLC24A5Q71RS6 500 aa17.06■□□□□ 0.32
C9orf50-202ENST00000619117 TPH2Q8IWU9 490 aa17.06■□□□□ 0.32
C9orf50-202ENST00000619117 TMEM192Q8IY95 271 aa17.06■□□□□ 0.32
C9orf50-202ENST00000619117 MICALL1Q8N3F8 863 aa17.06■□□□□ 0.32
C9orf50-202ENST00000619117 ZNF579Q8NAF0 562 aaKnown RBP17.06■□□□□ 0.32
C9orf50-202ENST00000619117 CLP1Q92989 425 aaKnown RBP17.06■□□□□ 0.32
C9orf50-202ENST00000619117 ZNF668Q96K58 619 aaPredicted RBP17.06■□□□□ 0.32
C9orf50-202ENST00000619117 GCOM2Q9BZD3 368 aaPredicted RBP17.06■□□□□ 0.32
C9orf50-202ENST00000619117 SUCLA2Q9P2R7 463 aaPredicted RBP17.06■□□□□ 0.32
C9orf50-202ENST00000619117 PRUNE2Q8WUY3 3088 aa17.06■□□□□ 0.32
C9orf50-202ENST00000619117 POTEMA6NI47 508 aa17.05■□□□□ 0.32
C9orf50-202ENST00000619117 C5orf67F2Z3F1 127 aa17.05■□□□□ 0.32
C9orf50-202ENST00000619117 H3BNC9 293 aa17.05■□□□□ 0.32
C9orf50-202ENST00000619117 EMC2Q15006 297 aa17.05■□□□□ 0.32
C9orf50-202ENST00000619117 ZNF174Q15697 407 aa17.05■□□□□ 0.32
C9orf50-202ENST00000619117 BACH2Q9BYV9 841 aa17.05■□□□□ 0.32
C9orf50-202ENST00000619117 ELAC1Q9H777 363 aaKnown RBP17.05■□□□□ 0.32
C9orf50-202ENST00000619117 PRDM6Q9NQX0 595 aa17.05■□□□□ 0.32
C9orf50-202ENST00000619117 ANKEF1Q9NU02 776 aa17.05■□□□□ 0.32
C9orf50-202ENST00000619117 THEGQ9P2T0 379 aa17.05■□□□□ 0.32
C9orf50-202ENST00000619117 LRFN2Q9ULH4 789 aa17.05■□□□□ 0.32
C9orf50-202ENST00000619117 PRRC2BQ5JSZ5 2229 aaKnown RBP17.05■□□□□ 0.32
C9orf50-202ENST00000619117 RALGAPA2Q2PPJ7 1873 aa17.04■□□□□ 0.32
C9orf50-202ENST00000619117 RB1P06400 928 aa17.04■□□□□ 0.32
C9orf50-202ENST00000619117 GJB2P29033 226 aa17.04■□□□□ 0.32
C9orf50-202ENST00000619117 CTNNB1P35222 781 aa17.04■□□□□ 0.32
C9orf50-202ENST00000619117 BMPR1AP36894 532 aa17.04■□□□□ 0.32
C9orf50-202ENST00000619117 FAM189BP81408 668 aa17.04■□□□□ 0.32
C9orf50-202ENST00000619117 XKR9Q5GH70 373 aa17.04■□□□□ 0.32
C9orf50-202ENST00000619117 RHPN2Q8IUC4 686 aa17.04■□□□□ 0.32
C9orf50-202ENST00000619117 PSPC1Q8WXF1 523 aaKnown RBP17.04■□□□□ 0.32
C9orf50-202ENST00000619117 TUFT1Q9NNX1 390 aa17.04■□□□□ 0.32
C9orf50-202ENST00000619117 TMEM161AQ9NX61 479 aa17.04■□□□□ 0.32
C9orf50-202ENST00000619117 PCDHB7Q9Y5E2 793 aa17.04■□□□□ 0.32
C9orf50-202ENST00000619117 COL4A3BPQ9Y5P4 624 aa17.04■□□□□ 0.32
C9orf50-202ENST00000619117 UNC80Q8N2C7 3258 aa17.03■□□□□ 0.32
C9orf50-202ENST00000619117 A0A087WZ62 844 aa17.03■□□□□ 0.32
C9orf50-202ENST00000619117 ZBTB39O15060 712 aa17.03■□□□□ 0.32
C9orf50-202ENST00000619117 SFPQP23246 707 aaKnown RBP eCLIP17.03■□□□□ 0.32
C9orf50-202ENST00000619117 NBR1Q14596 966 aa17.03■□□□□ 0.32
C9orf50-202ENST00000619117 TCP11Q8WWU5 503 aa17.03■□□□□ 0.32
C9orf50-202ENST00000619117 MRPL38Q96DV4 380 aaKnown RBP17.03■□□□□ 0.32
C9orf50-202ENST00000619117 NLRP4Q96MN2 994 aa17.03■□□□□ 0.32
C9orf50-202ENST00000619117 FDXACB1Q9BRP7 624 aaPredicted RBP17.03■□□□□ 0.32
C9orf50-202ENST00000619117 C11orf84Q9BUA3 381 aaPredicted RBP17.03■□□□□ 0.32
C9orf50-202ENST00000619117 PLVAPQ9BX97 442 aa17.03■□□□□ 0.32
C9orf50-202ENST00000619117 INO80BQ9C086 356 aaPredicted RBP17.03■□□□□ 0.32
C9orf50-202ENST00000619117 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.03■□□□□ 0.32
C9orf50-202ENST00000619117 MRPL42Q9Y6G3 142 aaKnown RBP17.03■□□□□ 0.32
C9orf50-202ENST00000619117 ARID2Q68CP9 1835 aa17.03■□□□□ 0.32
C9orf50-202ENST00000619117 SPATA31C1P0DKV0 1188 aa17.02■□□□□ 0.32
C9orf50-202ENST00000619117 XRCC6P12956 609 aaKnown RBP eCLIP17.02■□□□□ 0.32
C9orf50-202ENST00000619117 ZSCAN20P17040 1043 aaPredicted RBP17.02■□□□□ 0.32
C9orf50-202ENST00000619117 FGFR4P22455 802 aa17.02■□□□□ 0.32
C9orf50-202ENST00000619117 RARRES1P49788 294 aa17.02■□□□□ 0.32
C9orf50-202ENST00000619117 GATMP50440 423 aa17.02■□□□□ 0.32
C9orf50-202ENST00000619117 TOB1P50616 345 aaPredicted RBP17.02■□□□□ 0.32
C9orf50-202ENST00000619117 FXR2P51116 673 aaKnown RBP eCLIP17.02■□□□□ 0.32
C9orf50-202ENST00000619117 GPM6BQ13491 265 aa17.02■□□□□ 0.32
C9orf50-202ENST00000619117 PTPROQ16827 1216 aa17.02■□□□□ 0.32
C9orf50-202ENST00000619117 KSR1Q8IVT5 923 aa17.02■□□□□ 0.32
C9orf50-202ENST00000619117 C4orf32Q8N8J7 132 aa17.02■□□□□ 0.32
C9orf50-202ENST00000619117 ATXN2LQ8WWM7 1075 aaKnown RBP17.02■□□□□ 0.32
C9orf50-202ENST00000619117 PRPF31Q8WWY3 499 aaKnown RBP17.02■□□□□ 0.32
C9orf50-202ENST00000619117 TMEM143Q96AN5 459 aa17.02■□□□□ 0.32
C9orf50-202ENST00000619117 MTRQ99707 1265 aa17.02■□□□□ 0.32
C9orf50-202ENST00000619117 POLR3CQ9BUI4 534 aaPredicted RBP17.02■□□□□ 0.32
C9orf50-202ENST00000619117 ATP6V0A4Q9HBG4 840 aa17.02■□□□□ 0.32
C9orf50-202ENST00000619117 IFT122Q9HBG6 1241 aa17.02■□□□□ 0.32
C9orf50-202ENST00000619117 XPNPEP1Q9NQW7 623 aa17.02■□□□□ 0.32
C9orf50-202ENST00000619117 CHST12Q9NRB3 414 aa17.02■□□□□ 0.32
C9orf50-202ENST00000619117 SMC3Q9UQE7 1217 aa17.02■□□□□ 0.32
C9orf50-202ENST00000619117 A0A0C4DFX4 3053 aa17.02■□□□□ 0.31
C9orf50-202ENST00000619117 NLRC5Q86WI3 1866 aa17.01■□□□□ 0.31
C9orf50-202ENST00000619117 CSDE1O75534 798 aaKnown RBP17.01■□□□□ 0.31
C9orf50-202ENST00000619117 DGAT1O75907 488 aa17.01■□□□□ 0.31
C9orf50-202ENST00000619117 TECP42680 631 aa17.01■□□□□ 0.31
C9orf50-202ENST00000619117 LAMTOR4Q0VGL1 99 aa17.01■□□□□ 0.31
C9orf50-202ENST00000619117 CUL4AQ13619 759 aa17.01■□□□□ 0.31
C9orf50-202ENST00000619117 PAN2Q504Q3 1202 aaKnown RBP17.01■□□□□ 0.31
C9orf50-202ENST00000619117 CATSPER3Q86XQ3 398 aa17.01■□□□□ 0.31
C9orf50-202ENST00000619117 ECHDC2Q86YB7 292 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms