RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 PTPN14Q15678 1187 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 RARS2Q5T160 578 aaKnown RBP5.26□□□□□ -1.57
SNCA-213ENST00000618500 MTSS1LQ765P7 747 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 FAM228AQ86W67 206 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 STK11IPQ8N1F8 1099 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 ZNF687Q8N1G0 1237 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 CELF5Q8N6W0 485 aaKnown RBP5.26□□□□□ -1.57
SNCA-213ENST00000618500 SMOC2Q9H3U7 446 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 TRPV5Q9NQA5 729 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.26□□□□□ -1.57
SNCA-213ENST00000618500 LIMD1Q9UGP4 676 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 FBXL21Q9UKT6 434 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 SIT1Q9Y3P8 196 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 NOC2LQ9Y3T9 749 aaKnown RBP5.26□□□□□ -1.57
SNCA-213ENST00000618500 USP34Q70CQ2 3546 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 DENND3A2RUS2 1198 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 RPS6KA5O75582 802 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 MX1P20591 662 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 GATMP50440 423 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 CSRP2Q16527 193 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 PAN2Q504Q3 1202 aaKnown RBP5.25□□□□□ -1.57
SNCA-213ENST00000618500 FAM160B1Q5W0V3 765 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 CABP7Q86V35 215 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 TRIM50Q86XT4 487 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 SLC44A3Q8N4M1 653 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 FLCNQ8NFG4 579 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 MICAL1Q8TDZ2 1067 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 DNASE1L2Q92874 299 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 LOXL4Q96JB6 756 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 KLHL5Q96PQ7 755 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 ADAM2Q99965 735 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 UBA5Q9GZZ9 404 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 ADAMTS10Q9H324 1103 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 FNIP2Q9P278 1114 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 PPME1Q9Y570 386 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 TDRD15B5MCY1 1934 aaKnown RBP5.25□□□□□ -1.57
SNCA-213ENST00000618500 MYH9P35579 1960 aaKnown RBP5.25□□□□□ -1.57
SNCA-213ENST00000618500 A0A0U1RQF3 1178 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 ZBTB42B2RXF5 422 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 KLRF2D3W0D1 207 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 hCG_1984214I3L0E3 225 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 MEIS2O14770 477 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 MAGEB2O15479 319 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 ATMINO43313 823 aaPredicted RBP5.25□□□□□ -1.57
SNCA-213ENST00000618500 C22orf31O95567 290 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 RETP07949 1114 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 BCAR1P56945 870 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 PFKPQ01813 784 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 CLLU1OSQ5K130 101 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 VPS53Q5VIR6 699 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 DCLRE1AQ6PJP8 1040 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 KIAA0319LQ8IZA0 1049 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 ZNF713Q8N859 430 aaPredicted RBP5.25□□□□□ -1.57
SNCA-213ENST00000618500 KCNG4Q8TDN1 519 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 PANK1Q8TE04 598 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 CUL5Q93034 780 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 IGSF21Q96ID5 467 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 BCO2Q9BYV7 579 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 JPH1Q9HDC5 661 aaPredicted RBP5.25□□□□□ -1.57
SNCA-213ENST00000618500 NCDNQ9UBB6 729 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 GMEB2Q9UKD1 530 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 ANGPTL2Q9UKU9 493 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 ST3GAL5Q9UNP4 418 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 CEP131Q9UPN4 1083 aa5.25□□□□□ -1.57
SNCA-213ENST00000618500 KANSL1LA0AUZ9 987 aa5.24□□□□□ -1.57
SNCA-213ENST00000618500 HIP1O00291 1037 aa5.24□□□□□ -1.57
SNCA-213ENST00000618500 ZNF623O75123 536 aa5.24□□□□□ -1.57
SNCA-213ENST00000618500 AKAP3O75969 853 aa5.24□□□□□ -1.57
SNCA-213ENST00000618500 DDAH1O94760 285 aa5.24□□□□□ -1.57
SNCA-213ENST00000618500 MICAL2O94851 1124 aa5.24□□□□□ -1.57
SNCA-213ENST00000618500 ASGR2P07307 311 aa5.24□□□□□ -1.57
SNCA-213ENST00000618500 GOLGA8HP0CJ92 632 aa5.24□□□□□ -1.57
SNCA-213ENST00000618500 GLULP15104 373 aa5.24□□□□□ -1.57
SNCA-213ENST00000618500 RBM10P98175 930 aaKnown RBP5.24□□□□□ -1.57
SNCA-213ENST00000618500 WTAPQ15007 396 aa5.24□□□□□ -1.57
SNCA-213ENST00000618500 SLC35G1Q2M3R5 365 aa5.24□□□□□ -1.57
SNCA-213ENST00000618500 SPOUT1Q5T280 376 aaKnown RBP5.24□□□□□ -1.57
SNCA-213ENST00000618500 FAM102BQ5T8I3 360 aa5.24□□□□□ -1.57
SNCA-213ENST00000618500 UTP14CQ5TAP6 766 aaKnown RBP5.24□□□□□ -1.57
SNCA-213ENST00000618500 LLGL2Q6P1M3 1020 aa5.24□□□□□ -1.57
SNCA-213ENST00000618500 C1orf228Q6PIY5 440 aa5.24□□□□□ -1.57
SNCA-213ENST00000618500 TMC7Q7Z402 723 aa5.24□□□□□ -1.57
SNCA-213ENST00000618500 FAM167AQ96KS9 214 aa5.24□□□□□ -1.57
SNCA-213ENST00000618500 PLEKHA4Q9H4M7 779 aa5.24□□□□□ -1.57
SNCA-213ENST00000618500 AZI2Q9H6S1 392 aa5.24□□□□□ -1.57
SNCA-213ENST00000618500 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.24□□□□□ -1.57
SNCA-213ENST00000618500 DACT1Q9NYF0 836 aa5.24□□□□□ -1.57
SNCA-213ENST00000618500 SLC9A2Q9UBY0 812 aa5.24□□□□□ -1.57
SNCA-213ENST00000618500 KCNH3Q9ULD8 1083 aa5.24□□□□□ -1.57
SNCA-213ENST00000618500 R4GN57 208 aa5.24□□□□□ -1.57
SNCA-213ENST00000618500 DOCK8Q8NF50 2099 aa5.24□□□□□ -1.57
SNCA-213ENST00000618500 CXCL14O95715 111 aa5.24□□□□□ -1.57
SNCA-213ENST00000618500 HNRNPA1P09651 372 aaKnown RBP eCLIP5.24□□□□□ -1.57
SNCA-213ENST00000618500 PPP2R5DQ14738 602 aa5.24□□□□□ -1.57
SNCA-213ENST00000618500 MLF2Q15773 248 aaPredicted RBP5.24□□□□□ -1.57
SNCA-213ENST00000618500 ABHD15Q6UXT9 468 aa5.24□□□□□ -1.57
SNCA-213ENST00000618500 MRPL10Q7Z7H8 261 aaKnown RBP5.24□□□□□ -1.57
SNCA-213ENST00000618500 MAFBQ9Y5Q3 323 aaPredicted RBP5.24□□□□□ -1.57
SNCA-213ENST00000618500 TNRC6BQ9UPQ9 1833 aaKnown RBP5.24□□□□□ -1.57
SNCA-213ENST00000618500 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms