RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 ORC2Q13416 577 aaPredicted RBP17.9■□□□□ 0.46
BRCA1-228ENST00000618469 NBR1Q14596 966 aa17.9■□□□□ 0.46
BRCA1-228ENST00000618469 ZNF174Q15697 407 aa17.9■□□□□ 0.46
BRCA1-228ENST00000618469 PTCRAQ6ISU1 281 aaPredicted RBP17.9■□□□□ 0.46
BRCA1-228ENST00000618469 EP400NLQ6ZTU2 488 aa17.9■□□□□ 0.46
BRCA1-228ENST00000618469 TMEM40Q8WWA1 233 aa17.9■□□□□ 0.46
BRCA1-228ENST00000618469 LINC01599Q8WXQ3 324 aa17.9■□□□□ 0.46
BRCA1-228ENST00000618469 SCLT1Q96NL6 688 aa17.9■□□□□ 0.46
BRCA1-228ENST00000618469 RAD9AQ99638 391 aa17.9■□□□□ 0.46
BRCA1-228ENST00000618469 C17orf80Q9BSJ5 609 aa17.9■□□□□ 0.46
BRCA1-228ENST00000618469 CDHR5Q9HBB8 845 aa17.9■□□□□ 0.46
BRCA1-228ENST00000618469 PADI3Q9ULW8 664 aa17.9■□□□□ 0.46
BRCA1-228ENST00000618469 COL4A6Q14031 1691 aa17.9■□□□□ 0.46
BRCA1-228ENST00000618469 PRR33A8MZF0 331 aa17.89■□□□□ 0.45
BRCA1-228ENST00000618469 H3BQ06 376 aaPredicted RBP17.89■□□□□ 0.45
BRCA1-228ENST00000618469 RPS6KA5O75582 802 aa17.89■□□□□ 0.45
BRCA1-228ENST00000618469 NFX1Q12986 1120 aaKnown RBP17.89■□□□□ 0.45
BRCA1-228ENST00000618469 DRP2Q13474 957 aa17.89■□□□□ 0.45
BRCA1-228ENST00000618469 NEK9Q8TD19 979 aa17.89■□□□□ 0.45
BRCA1-228ENST00000618469 ZNF668Q96K58 619 aaPredicted RBP17.89■□□□□ 0.45
BRCA1-228ENST00000618469 TGS1Q96RS0 853 aaKnown RBP17.89■□□□□ 0.45
BRCA1-228ENST00000618469 CEP89Q96ST8 783 aa17.89■□□□□ 0.45
BRCA1-228ENST00000618469 EIF2AK1Q9BQI3 630 aaKnown RBP17.89■□□□□ 0.45
BRCA1-228ENST00000618469 ZSWIM4Q9H7M6 989 aa17.89■□□□□ 0.45
BRCA1-228ENST00000618469 CYP26B1Q9NR63 512 aa17.89■□□□□ 0.45
BRCA1-228ENST00000618469 NOC2LQ9Y3T9 749 aaKnown RBP17.89■□□□□ 0.45
BRCA1-228ENST00000618469 GPR32O75388 356 aa17.88■□□□□ 0.45
BRCA1-228ENST00000618469 YWHABP31946 246 aaKnown RBP17.88■□□□□ 0.45
BRCA1-228ENST00000618469 CRYBB1P53674 252 aaPredicted RBP17.88■□□□□ 0.45
BRCA1-228ENST00000618469 NPEPPSP55786 919 aa17.88■□□□□ 0.45
BRCA1-228ENST00000618469 NLRP11P59045 1033 aaKnown RBP17.88■□□□□ 0.45
BRCA1-228ENST00000618469 ERVK-21P61565 698 aa17.88■□□□□ 0.45
BRCA1-228ENST00000618469 CSPP1Q1MSJ5 1256 aa17.88■□□□□ 0.45
BRCA1-228ENST00000618469 LEXMQ3ZCV2 418 aa17.88■□□□□ 0.45
BRCA1-228ENST00000618469 TPH2Q8IWU9 490 aa17.88■□□□□ 0.45
BRCA1-228ENST00000618469 C4orf19Q8IY42 314 aa17.88■□□□□ 0.45
BRCA1-228ENST00000618469 TOP1MTQ969P6 601 aa17.88■□□□□ 0.45
BRCA1-228ENST00000618469 CEP170P1Q96L14 293 aa17.88■□□□□ 0.45
BRCA1-228ENST00000618469 YME1L1Q96TA2 773 aa17.88■□□□□ 0.45
BRCA1-228ENST00000618469 FTHL17Q9BXU8 183 aa17.88■□□□□ 0.45
BRCA1-228ENST00000618469 ERVK-5Q9HDB9 667 aa17.88■□□□□ 0.45
BRCA1-228ENST00000618469 BMP2KQ9NSY1 1161 aaPredicted RBP17.88■□□□□ 0.45
BRCA1-228ENST00000618469 INSL6Q9Y581 213 aa17.88■□□□□ 0.45
BRCA1-228ENST00000618469 PIEZO1Q92508 2521 aa17.88■□□□□ 0.45
BRCA1-228ENST00000618469 NLRC5Q86WI3 1866 aa17.87■□□□□ 0.45
BRCA1-228ENST00000618469 MAFO75444 373 aaPredicted RBP17.87■□□□□ 0.45
BRCA1-228ENST00000618469 GPC3P51654 580 aa17.87■□□□□ 0.45
BRCA1-228ENST00000618469 POLGP54098 1239 aaPredicted RBP17.87■□□□□ 0.45
BRCA1-228ENST00000618469 HTRA4P83105 476 aaPredicted RBP17.87■□□□□ 0.45
BRCA1-228ENST00000618469 FAM228AQ86W67 206 aa17.87■□□□□ 0.45
BRCA1-228ENST00000618469 NLRP7Q8WX94 980 aa17.87■□□□□ 0.45
BRCA1-228ENST00000618469 SLC7A3Q8WY07 619 aa17.87■□□□□ 0.45
BRCA1-228ENST00000618469 CCDC43Q96MW1 224 aaKnown RBP17.87■□□□□ 0.45
BRCA1-228ENST00000618469 TMX1Q9H3N1 280 aa17.87■□□□□ 0.45
BRCA1-228ENST00000618469 LMCD1Q9NZU5 365 aa17.87■□□□□ 0.45
BRCA1-228ENST00000618469 IGKV6-21A0A0C4DH24 114 aa17.86■□□□□ 0.45
BRCA1-228ENST00000618469 ENPP3O14638 875 aa17.86■□□□□ 0.45
BRCA1-228ENST00000618469 IBSPP21815 317 aaPredicted RBP17.86■□□□□ 0.45
BRCA1-228ENST00000618469 TECP42680 631 aa17.86■□□□□ 0.45
BRCA1-228ENST00000618469 DNM2P50570 870 aa17.86■□□□□ 0.45
BRCA1-228ENST00000618469 TOB1P50616 345 aaPredicted RBP17.86■□□□□ 0.45
BRCA1-228ENST00000618469 CUL4AQ13619 759 aa17.86■□□□□ 0.45
BRCA1-228ENST00000618469 XKR9Q5GH70 373 aa17.86■□□□□ 0.45
BRCA1-228ENST00000618469 ODR4Q5SWX8 454 aa17.86■□□□□ 0.45
BRCA1-228ENST00000618469 ZNF579Q8NAF0 562 aaKnown RBP17.86■□□□□ 0.45
BRCA1-228ENST00000618469 FBXO22Q8NEZ5 403 aa17.86■□□□□ 0.45
BRCA1-228ENST00000618469 FBXL18Q96ME1 805 aa17.86■□□□□ 0.45
BRCA1-228ENST00000618469 JPH2Q9BR39 696 aaPredicted RBP17.86■□□□□ 0.45
BRCA1-228ENST00000618469 ADAMTS10Q9H324 1103 aa17.86■□□□□ 0.45
BRCA1-228ENST00000618469 ST3GAL5Q9UNP4 418 aa17.86■□□□□ 0.45
BRCA1-228ENST00000618469 PCDHB6Q9Y5E3 794 aa17.86■□□□□ 0.45
BRCA1-228ENST00000618469 WDFY4Q6ZS81 3184 aa17.86■□□□□ 0.45
BRCA1-228ENST00000618469 TTC3P53804 2025 aa17.86■□□□□ 0.45
BRCA1-228ENST00000618469 DENND3A2RUS2 1198 aa17.85■□□□□ 0.45
BRCA1-228ENST00000618469 GRXCR2A6NFK2 248 aa17.85■□□□□ 0.45
BRCA1-228ENST00000618469 ZBTB39O15060 712 aa17.85■□□□□ 0.45
BRCA1-228ENST00000618469 GPR182O15218 404 aa17.85■□□□□ 0.45
BRCA1-228ENST00000618469 MGEA5O60502 916 aa17.85■□□□□ 0.45
BRCA1-228ENST00000618469 SLITRK3O94933 977 aa17.85■□□□□ 0.45
BRCA1-228ENST00000618469 RFC5P40937 340 aa17.85■□□□□ 0.45
BRCA1-228ENST00000618469 NHLH1Q02575 133 aa17.85■□□□□ 0.45
BRCA1-228ENST00000618469 MYO7AQ13402 2215 aa17.85■□□□□ 0.45
BRCA1-228ENST00000618469 EMC2Q15006 297 aa17.85■□□□□ 0.45
BRCA1-228ENST00000618469 RALGAPA2Q2PPJ7 1873 aa17.85■□□□□ 0.45
BRCA1-228ENST00000618469 OTUD6AQ7L8S5 288 aa17.85■□□□□ 0.45
BRCA1-228ENST00000618469 RHPN2Q8IUC4 686 aa17.85■□□□□ 0.45
BRCA1-228ENST00000618469 ZNF710Q8N1W2 664 aa17.85■□□□□ 0.45
BRCA1-228ENST00000618469 SP7Q8TDD2 431 aaPredicted RBP17.85■□□□□ 0.45
BRCA1-228ENST00000618469 HSD17B14Q9BPX1 270 aa17.85■□□□□ 0.45
BRCA1-228ENST00000618469 SUCLA2Q9P2R7 463 aaPredicted RBP17.85■□□□□ 0.45
BRCA1-228ENST00000618469 PPME1Q9Y570 386 aa17.85■□□□□ 0.45
BRCA1-228ENST00000618469 ADGRA3Q8IWK6 1321 aa17.84■□□□□ 0.45
BRCA1-228ENST00000618469 LYPLA2O95372 231 aa17.84■□□□□ 0.45
BRCA1-228ENST00000618469 LARP1BQ659C4 914 aaKnown RBP17.84■□□□□ 0.45
BRCA1-228ENST00000618469 RTN4RL1Q86UN2 441 aaPredicted RBP17.84■□□□□ 0.45
BRCA1-228ENST00000618469 ERMNQ8TAM6 284 aa17.84■□□□□ 0.45
BRCA1-228ENST00000618469 NLRP4Q96MN2 994 aa17.84■□□□□ 0.45
BRCA1-228ENST00000618469 DHX33Q9H6R0 707 aaKnown RBP17.84■□□□□ 0.45
BRCA1-228ENST00000618469 VPS37CA5D8V6 355 aaPredicted RBP17.83■□□□□ 0.44
BRCA1-228ENST00000618469 K7ELQ4 463 aaPredicted RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms