RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 PLOD1Q02809 727 aaPredicted RBP15.98■□□□□ 0.15
COL5A1-208ENST00000618395 IKBIPQ70UQ0 350 aa15.98■□□□□ 0.15
COL5A1-208ENST00000618395 DHX36Q9H2U1 1008 aaKnown RBP15.98■□□□□ 0.15
COL5A1-208ENST00000618395 ZNF556Q9HAH1 456 aa15.98■□□□□ 0.15
COL5A1-208ENST00000618395 USP14P54578 494 aa15.97■□□□□ 0.15
COL5A1-208ENST00000618395 PDAP1Q13442 181 aaKnown RBP15.97■□□□□ 0.15
COL5A1-208ENST00000618395 KLHL17Q6TDP4 642 aa15.97■□□□□ 0.15
COL5A1-208ENST00000618395 ANKRD13DQ6ZTN6 518 aa15.97■□□□□ 0.15
COL5A1-208ENST00000618395 KDM4CQ9H3R0 1056 aa15.97■□□□□ 0.15
COL5A1-208ENST00000618395 ABCF3Q9NUQ8 709 aa15.97■□□□□ 0.15
COL5A1-208ENST00000618395 STK39Q9UEW8 545 aa15.97■□□□□ 0.15
COL5A1-208ENST00000618395 LRRC14Q15048 493 aa15.97■□□□□ 0.15
COL5A1-208ENST00000618395 AOC3Q16853 763 aa15.97■□□□□ 0.15
COL5A1-208ENST00000618395 RSRC2Q7L4I2 434 aaKnown RBP15.97■□□□□ 0.15
COL5A1-208ENST00000618395 C3orf20Q8ND61 904 aa15.97■□□□□ 0.15
COL5A1-208ENST00000618395 MIEF2Q96C03 454 aa15.97■□□□□ 0.15
COL5A1-208ENST00000618395 TOP2BQ02880 1626 aa15.97■□□□□ 0.15
COL5A1-208ENST00000618395 PDE9AO76083 593 aa15.97■□□□□ 0.15
COL5A1-208ENST00000618395 BCL10O95999 233 aa15.97■□□□□ 0.15
COL5A1-208ENST00000618395 ARMC4Q5T2S8 1044 aa15.97■□□□□ 0.15
COL5A1-208ENST00000618395 PASD1Q8IV76 773 aa15.97■□□□□ 0.15
COL5A1-208ENST00000618395 MICALL2Q8IY33 904 aa15.97■□□□□ 0.15
COL5A1-208ENST00000618395 EIF4A3P38919 411 aaKnown RBP15.97■□□□□ 0.15
COL5A1-208ENST00000618395 NOL6Q9H6R4 1146 aaKnown RBP15.97■□□□□ 0.15
COL5A1-208ENST00000618395 MYH8P13535 1937 aa15.97■□□□□ 0.15
COL5A1-208ENST00000618395 SRGAP2O75044 1071 aa15.97■□□□□ 0.15
COL5A1-208ENST00000618395 IRAK1P51617 712 aa15.97■□□□□ 0.15
COL5A1-208ENST00000618395 TSTA3Q13630 321 aaPredicted RBP15.97■□□□□ 0.15
COL5A1-208ENST00000618395 MAN2A1Q16706 1144 aa15.97■□□□□ 0.15
COL5A1-208ENST00000618395 LPCAT2Q7L5N7 544 aa15.97■□□□□ 0.15
COL5A1-208ENST00000618395 ALBP02768 609 aa15.97■□□□□ 0.15
COL5A1-208ENST00000618395 RPS6P62753 249 aaKnown RBP15.97■□□□□ 0.15
COL5A1-208ENST00000618395 MYL7Q01449 175 aa15.97■□□□□ 0.15
COL5A1-208ENST00000618395 AASDHQ4L235 1098 aaPredicted RBP15.97■□□□□ 0.15
COL5A1-208ENST00000618395 SNX19Q92543 992 aa15.97■□□□□ 0.15
COL5A1-208ENST00000618395 ANO9A1A5B4 782 aa15.96■□□□□ 0.15
COL5A1-208ENST00000618395 REXO1Q8N1G1 1221 aaKnown RBP15.96■□□□□ 0.15
COL5A1-208ENST00000618395 KIF2BQ8N4N8 673 aa15.96■□□□□ 0.15
COL5A1-208ENST00000618395 OTULINQ96BN8 352 aa15.96■□□□□ 0.15
COL5A1-208ENST00000618395 NUDT16Q96DE0 195 aaKnown RBP15.96■□□□□ 0.15
COL5A1-208ENST00000618395 GGT7Q9UJ14 662 aa15.96■□□□□ 0.15
COL5A1-208ENST00000618395 SYNJ1O43426 1573 aa15.96■□□□□ 0.15
COL5A1-208ENST00000618395 PRR23AA6NEV1 266 aa15.96■□□□□ 0.15
COL5A1-208ENST00000618395 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.96■□□□□ 0.15
COL5A1-208ENST00000618395 ZNF274Q96GC6 653 aaPredicted RBP15.96■□□□□ 0.15
COL5A1-208ENST00000618395 EML4Q9HC35 981 aaKnown RBP15.96■□□□□ 0.15
COL5A1-208ENST00000618395 SMCO2A6NFE2 343 aa15.96■□□□□ 0.15
COL5A1-208ENST00000618395 NLRP11P59045 1033 aaKnown RBP15.96■□□□□ 0.15
COL5A1-208ENST00000618395 CYP4A11Q02928 519 aa15.96■□□□□ 0.15
COL5A1-208ENST00000618395 TMEM63BQ5T3F8 832 aa15.96■□□□□ 0.15
COL5A1-208ENST00000618395 CYP4A22Q5TCH4 519 aa15.96■□□□□ 0.15
COL5A1-208ENST00000618395 SDE2Q6IQ49 451 aa15.96■□□□□ 0.15
COL5A1-208ENST00000618395 TTC6Q86TZ1 520 aa15.96■□□□□ 0.15
COL5A1-208ENST00000618395 VPS39Q96JC1 886 aa15.96■□□□□ 0.15
COL5A1-208ENST00000618395 ATAD2BQ9ULI0 1458 aa15.96■□□□□ 0.15
COL5A1-208ENST00000618395 WDR64B1ANS9 1081 aa15.96■□□□□ 0.15
COL5A1-208ENST00000618395 BTN3A3O00478 584 aa15.96■□□□□ 0.15
COL5A1-208ENST00000618395 CSTF3Q12996 717 aaKnown RBP15.96■□□□□ 0.15
COL5A1-208ENST00000618395 BBS9Q3SYG4 887 aa15.96■□□□□ 0.15
COL5A1-208ENST00000618395 KHDRBS2Q5VWX1 349 aaKnown RBP15.96■□□□□ 0.15
COL5A1-208ENST00000618395 ABHD8Q96I13 439 aa15.96■□□□□ 0.15
COL5A1-208ENST00000618395 RTEL1Q9NZ71 1219 aa15.96■□□□□ 0.15
COL5A1-208ENST00000618395 ROR2Q01974 943 aaKnown RBP15.96■□□□□ 0.15
COL5A1-208ENST00000618395 IFRD2Q12894 506 aaPredicted RBP15.96■□□□□ 0.15
COL5A1-208ENST00000618395 GYS1P13807 737 aa15.96■□□□□ 0.14
COL5A1-208ENST00000618395 TMOD1P28289 359 aa15.96■□□□□ 0.14
COL5A1-208ENST00000618395 CDC26Q8NHZ8 85 aa15.96■□□□□ 0.14
COL5A1-208ENST00000618395 SMCR8Q8TEV9 937 aaPredicted RBP15.96■□□□□ 0.14
COL5A1-208ENST00000618395 PAIP1Q9H074 479 aaKnown RBP15.96■□□□□ 0.14
COL5A1-208ENST00000618395 CHPF2Q9P2E5 772 aa15.96■□□□□ 0.14
COL5A1-208ENST00000618395 VIL1P09327 827 aaKnown RBP15.96■□□□□ 0.14
COL5A1-208ENST00000618395 TAB1Q15750 504 aa15.96■□□□□ 0.14
COL5A1-208ENST00000618395 PDCD10Q9BUL8 212 aa15.96■□□□□ 0.14
COL5A1-208ENST00000618395 PPIDQ08752 370 aaKnown RBP15.95■□□□□ 0.14
COL5A1-208ENST00000618395 ARL8AQ96BM9 186 aa15.95■□□□□ 0.14
COL5A1-208ENST00000618395 ERP27Q96DN0 273 aa15.95■□□□□ 0.14
COL5A1-208ENST00000618395 KLHL4Q9C0H6 718 aa15.95■□□□□ 0.14
COL5A1-208ENST00000618395 CUL7Q14999 1698 aa15.95■□□□□ 0.14
COL5A1-208ENST00000618395 KRT1P04264 644 aa15.95■□□□□ 0.14
COL5A1-208ENST00000618395 ZNF786Q8N393 782 aa15.95■□□□□ 0.14
COL5A1-208ENST00000618395 GCNT4Q9P109 453 aa15.95■□□□□ 0.14
COL5A1-208ENST00000618395 SMG5Q9UPR3 1016 aaKnown RBP15.95■□□□□ 0.14
COL5A1-208ENST00000618395 PALMO75781 387 aa15.95■□□□□ 0.14
COL5A1-208ENST00000618395 CHN1P15882 459 aa15.95■□□□□ 0.14
COL5A1-208ENST00000618395 MFAP3P55082 362 aa15.95■□□□□ 0.14
COL5A1-208ENST00000618395 PICALMQ13492 652 aa15.95■□□□□ 0.14
COL5A1-208ENST00000618395 OTUD7BQ6GQQ9 843 aa15.95■□□□□ 0.14
COL5A1-208ENST00000618395 PNMA2Q9UL42 364 aa15.95■□□□□ 0.14
COL5A1-208ENST00000618395 SP4Q02446 784 aa15.95■□□□□ 0.14
COL5A1-208ENST00000618395 TSSK1BQ9BXA7 367 aa15.95■□□□□ 0.14
COL5A1-208ENST00000618395 REXO4Q9GZR2 422 aaKnown RBP15.95■□□□□ 0.14
COL5A1-208ENST00000618395 GPTP24298 496 aa15.95■□□□□ 0.14
COL5A1-208ENST00000618395 HERC5Q9UII4 1024 aaKnown RBP15.95■□□□□ 0.14
COL5A1-208ENST00000618395 RNF103O00237 685 aa15.95■□□□□ 0.14
COL5A1-208ENST00000618395 PIK3CAP42336 1068 aa15.95■□□□□ 0.14
COL5A1-208ENST00000618395 SCTRP47872 440 aa15.95■□□□□ 0.14
COL5A1-208ENST00000618395 KCNJ14Q9UNX9 436 aa15.95■□□□□ 0.14
COL5A1-208ENST00000618395 C1orf232A0A0U1RR37 186 aa15.94■□□□□ 0.14
COL5A1-208ENST00000618395 MFAP3LO75121 409 aa15.94■□□□□ 0.14
COL5A1-208ENST00000618395 YWHABP31946 246 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms