RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 SYNGAP1Q96PV0 1343 aa16.87■□□□□ 0.29
GPN1-212ENST00000616939 PODXLO00592 558 aa16.86■□□□□ 0.29
GPN1-212ENST00000616939 LIN7AO14910 233 aaPredicted RBP16.86■□□□□ 0.29
GPN1-212ENST00000616939 PPP1R12AO14974 1030 aaPredicted RBP16.86■□□□□ 0.29
GPN1-212ENST00000616939 PLCG2P16885 1265 aa16.86■□□□□ 0.29
GPN1-212ENST00000616939 NCALDP61601 193 aa16.86■□□□□ 0.29
GPN1-212ENST00000616939 ARSHQ5FYA8 562 aa16.86■□□□□ 0.29
GPN1-212ENST00000616939 TAOK1Q7L7X3 1001 aa16.86■□□□□ 0.29
GPN1-212ENST00000616939 PROCA1Q8NCQ7 364 aaPredicted RBP16.86■□□□□ 0.29
GPN1-212ENST00000616939 SLC35C1Q96A29 364 aa16.86■□□□□ 0.29
GPN1-212ENST00000616939 AJAP1Q9UKB5 411 aaPredicted RBP16.86■□□□□ 0.29
GPN1-212ENST00000616939 ATF5Q9Y2D1 282 aaPredicted RBP16.86■□□□□ 0.29
GPN1-212ENST00000616939 CYP3A7-CYP3A51PA0A087WV96 503 aa16.86■□□□□ 0.29
GPN1-212ENST00000616939 MIF4GDA9UHW6 222 aaKnown RBP16.86■□□□□ 0.29
GPN1-212ENST00000616939 O00370 1275 aa16.86■□□□□ 0.29
GPN1-212ENST00000616939 SNX3O60493 162 aa16.86■□□□□ 0.29
GPN1-212ENST00000616939 CYP3A7P24462 503 aa16.86■□□□□ 0.29
GPN1-212ENST00000616939 SOX5P35711 763 aa16.86■□□□□ 0.29
GPN1-212ENST00000616939 IRX1P78414 480 aaPredicted RBP16.86■□□□□ 0.29
GPN1-212ENST00000616939 C15orf52Q6ZUT6 534 aaKnown RBP16.86■□□□□ 0.29
GPN1-212ENST00000616939 MAPKAPK5Q8IW41 473 aa16.86■□□□□ 0.29
GPN1-212ENST00000616939 UBA5Q9GZZ9 404 aa16.86■□□□□ 0.29
GPN1-212ENST00000616939 COL16A1Q07092 1604 aaPredicted RBP16.86■□□□□ 0.29
GPN1-212ENST00000616939 POTEB3A0JP26 581 aa16.85■□□□□ 0.29
GPN1-212ENST00000616939 POTECB2RU33 542 aa16.85■□□□□ 0.29
GPN1-212ENST00000616939 MARCH6O60337 910 aa16.85■□□□□ 0.29
GPN1-212ENST00000616939 WFS1O76024 890 aa16.85■□□□□ 0.29
GPN1-212ENST00000616939 KRT18P05783 430 aaKnown RBP16.85■□□□□ 0.29
GPN1-212ENST00000616939 VCAM1P19320 739 aa16.85■□□□□ 0.29
GPN1-212ENST00000616939 CCND1P24385 295 aa16.85■□□□□ 0.29
GPN1-212ENST00000616939 ZKSCAN8Q15776 578 aaPredicted RBP16.85■□□□□ 0.29
GPN1-212ENST00000616939 CNGA2Q16280 664 aa16.85■□□□□ 0.29
GPN1-212ENST00000616939 C11orf63Q6NUN7 778 aa16.85■□□□□ 0.29
GPN1-212ENST00000616939 POTEBQ6S5H4 581 aa16.85■□□□□ 0.29
GPN1-212ENST00000616939 SLC35G2Q8TBE7 412 aa16.85■□□□□ 0.29
GPN1-212ENST00000616939 CTNNBL1Q8WYA6 563 aaPredicted RBP16.85■□□□□ 0.29
GPN1-212ENST00000616939 CNKSR1Q969H4 720 aa16.85■□□□□ 0.29
GPN1-212ENST00000616939 STAMBPL1Q96FJ0 436 aa16.85■□□□□ 0.29
GPN1-212ENST00000616939 STK33Q9BYT3 514 aa16.85■□□□□ 0.29
GPN1-212ENST00000616939 GCNT4Q9P109 453 aa16.85■□□□□ 0.29
GPN1-212ENST00000616939 SLAIN2Q9P270 581 aa16.85■□□□□ 0.29
GPN1-212ENST00000616939 SAP30BPQ9UHR5 308 aaKnown RBP16.85■□□□□ 0.29
GPN1-212ENST00000616939 NR2E1Q9Y466 385 aa16.85■□□□□ 0.29
GPN1-212ENST00000616939 FRMPD4Q14CM0 1322 aa16.85■□□□□ 0.29
GPN1-212ENST00000616939 GPR75-ASB3A0A0A6YYF3 556 aa16.84■□□□□ 0.29
GPN1-212ENST00000616939 IGKV6D-41A0A0C4DH26 115 aa16.84■□□□□ 0.29
GPN1-212ENST00000616939 NPHP3-ACAD11A0A0J9YXS1 232 aa16.84■□□□□ 0.29
GPN1-212ENST00000616939 NR3C1P04150 777 aa16.84■□□□□ 0.29
GPN1-212ENST00000616939 RARAP10276 462 aa16.84■□□□□ 0.29
GPN1-212ENST00000616939 CTNNA2P26232 953 aa16.84■□□□□ 0.29
GPN1-212ENST00000616939 CALRP27797 417 aaKnown RBP16.84■□□□□ 0.29
GPN1-212ENST00000616939 HOXD13P35453 343 aa16.84■□□□□ 0.29
GPN1-212ENST00000616939 GIT2Q14161 759 aa16.84■□□□□ 0.29
GPN1-212ENST00000616939 ACCSLQ4AC99 568 aa16.84■□□□□ 0.29
GPN1-212ENST00000616939 SLFN12Q8IYM2 578 aa16.84■□□□□ 0.29
GPN1-212ENST00000616939 NSMCE1Q8WV22 266 aa16.84■□□□□ 0.29
GPN1-212ENST00000616939 NLRP3Q96P20 1036 aa16.84■□□□□ 0.29
GPN1-212ENST00000616939 ELAC2Q9BQ52 826 aaKnown RBP16.84■□□□□ 0.29
GPN1-212ENST00000616939 ERVK-5Q9HDB9 667 aa16.84■□□□□ 0.29
GPN1-212ENST00000616939 HOMER3Q9NSC5 361 aa16.84■□□□□ 0.29
GPN1-212ENST00000616939 PPP1R9AQ9ULJ8 1098 aa16.84■□□□□ 0.29
GPN1-212ENST00000616939 USP15Q9Y4E8 981 aaPredicted RBP16.84■□□□□ 0.29
GPN1-212ENST00000616939 PFASO15067 1338 aa16.84■□□□□ 0.29
GPN1-212ENST00000616939 EVI5O60447 810 aa16.84■□□□□ 0.29
GPN1-212ENST00000616939 AKAP3O75969 853 aa16.84■□□□□ 0.29
GPN1-212ENST00000616939 RARGP13631 454 aa16.84■□□□□ 0.29
GPN1-212ENST00000616939 NAA25Q14CX7 972 aa16.84■□□□□ 0.29
GPN1-212ENST00000616939 TXNRD3Q86VQ6 643 aa16.84■□□□□ 0.29
GPN1-212ENST00000616939 RHOT2Q8IXI1 618 aa16.84■□□□□ 0.29
GPN1-212ENST00000616939 KCTD17Q8N5Z5 321 aa16.84■□□□□ 0.29
GPN1-212ENST00000616939 SYT2Q8N9I0 419 aaPredicted RBP16.84■□□□□ 0.29
GPN1-212ENST00000616939 FBXO25Q8TCJ0 367 aa16.84■□□□□ 0.29
GPN1-212ENST00000616939 TCP11Q8WWU5 503 aa16.84■□□□□ 0.29
GPN1-212ENST00000616939 BORCS6Q96GS4 357 aa16.84■□□□□ 0.29
GPN1-212ENST00000616939 IFT74Q96LB3 600 aa16.84■□□□□ 0.29
GPN1-212ENST00000616939 TRIM31Q9BZY9 425 aa16.84■□□□□ 0.29
GPN1-212ENST00000616939 PCDHA3Q9Y5H8 950 aa16.84■□□□□ 0.29
GPN1-212ENST00000616939 ASTN1O14525 1302 aa16.83■□□□□ 0.29
GPN1-212ENST00000616939 ANKRD62A6NC57 917 aa16.83■□□□□ 0.28
GPN1-212ENST00000616939 SKIV2L2P42285 1042 aaKnown RBP16.83■□□□□ 0.28
GPN1-212ENST00000616939 CASP5P51878 434 aa16.83■□□□□ 0.28
GPN1-212ENST00000616939 CCNG1P51959 295 aa16.83■□□□□ 0.28
GPN1-212ENST00000616939 PLTPP55058 493 aa16.83■□□□□ 0.28
GPN1-212ENST00000616939 MYO1EQ12965 1108 aa16.83■□□□□ 0.28
GPN1-212ENST00000616939 BNIP1Q12981 228 aa16.83■□□□□ 0.28
GPN1-212ENST00000616939 MKRN4PQ13434 485 aaPredicted RBP16.83■□□□□ 0.28
GPN1-212ENST00000616939 AUHQ13825 339 aaKnown RBP16.83■□□□□ 0.28
GPN1-212ENST00000616939 SLC29A2Q14542 456 aa16.83■□□□□ 0.28
GPN1-212ENST00000616939 DIXDC1Q155Q3 683 aa16.83■□□□□ 0.28
GPN1-212ENST00000616939 CYP1B1Q16678 543 aa16.83■□□□□ 0.28
GPN1-212ENST00000616939 UBE2SQ16763 222 aa16.83■□□□□ 0.28
GPN1-212ENST00000616939 PTPROQ16827 1216 aa16.83■□□□□ 0.28
GPN1-212ENST00000616939 CYFIP1Q7L576 1253 aa16.83■□□□□ 0.28
GPN1-212ENST00000616939 TBC1D1Q86TI0 1168 aaPredicted RBP16.83■□□□□ 0.28
GPN1-212ENST00000616939 TBC1D16Q8TBP0 767 aa16.83■□□□□ 0.28
GPN1-212ENST00000616939 MORC4Q8TE76 937 aa16.83■□□□□ 0.28
GPN1-212ENST00000616939 PRMT1Q99873 361 aaKnown RBP16.83■□□□□ 0.28
GPN1-212ENST00000616939 MKNK1Q9BUB5 465 aa16.83■□□□□ 0.28
GPN1-212ENST00000616939 JMJD4Q9H9V9 463 aa16.83■□□□□ 0.28
GPN1-212ENST00000616939 ABCF3Q9NUQ8 709 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms