RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 IFT22Q9H7X7 185 aa7.15□□□□□ -1.26
SCAMP1-205ENST00000614488 RNF151Q2KHN1 245 aa7.14□□□□□ -1.27
SCAMP1-205ENST00000614488 SPATS1Q496A3 300 aa7.14□□□□□ -1.27
SCAMP1-205ENST00000614488 KLHDC10Q6PID8 442 aa7.14□□□□□ -1.27
SCAMP1-205ENST00000614488 ESPNLQ6ZVH7 1005 aa7.14□□□□□ -1.27
SCAMP1-205ENST00000614488 MYL10Q9BUA6 226 aa7.14□□□□□ -1.27
SCAMP1-205ENST00000614488 APOBEC2Q9Y235 224 aaKnown RBP7.14□□□□□ -1.27
SCAMP1-205ENST00000614488 NR2E1Q9Y466 385 aa7.14□□□□□ -1.27
SCAMP1-205ENST00000614488 DDB1Q16531 1140 aa7.13□□□□□ -1.27
SCAMP1-205ENST00000614488 KRT26Q7Z3Y9 468 aa7.13□□□□□ -1.27
SCAMP1-205ENST00000614488 LIMS2Q7Z4I7 341 aa7.13□□□□□ -1.27
SCAMP1-205ENST00000614488 SLC5A5Q92911 643 aa7.13□□□□□ -1.27
SCAMP1-205ENST00000614488 GFM2Q969S9 779 aaKnown RBP7.13□□□□□ -1.27
SCAMP1-205ENST00000614488 TTC1Q99614 292 aa7.13□□□□□ -1.27
SCAMP1-205ENST00000614488 KRTAP4-2Q9BYR5 136 aa7.13□□□□□ -1.27
SCAMP1-205ENST00000614488 POLR3BQ9NW08 1133 aaPredicted RBP7.13□□□□□ -1.27
SCAMP1-205ENST00000614488 MSRAQ9UJ68 235 aa7.13□□□□□ -1.27
SCAMP1-205ENST00000614488 DENND2AQ9ULE3 1009 aa7.13□□□□□ -1.27
SCAMP1-205ENST00000614488 OAZ3Q9UMX2 235 aa7.13□□□□□ -1.27
SCAMP1-205ENST00000614488 A0A0A6YYJ9 748 aa7.12□□□□□ -1.27
SCAMP1-205ENST00000614488 GPR42O15529 346 aa7.12□□□□□ -1.27
SCAMP1-205ENST00000614488 H2AFYO75367 372 aaKnown RBP7.12□□□□□ -1.27
SCAMP1-205ENST00000614488 TBR1Q16650 682 aa7.12□□□□□ -1.27
SCAMP1-205ENST00000614488 ATP13A4Q4VNC1 1196 aa7.12□□□□□ -1.27
SCAMP1-205ENST00000614488 AFAP1L2Q8N4X5 818 aa7.12□□□□□ -1.27
SCAMP1-205ENST00000614488 DNERQ8NFT8 737 aa7.12□□□□□ -1.27
SCAMP1-205ENST00000614488 NKD2Q969F2 451 aaPredicted RBP7.12□□□□□ -1.27
SCAMP1-205ENST00000614488 DYDC2Q96IM9 177 aa7.12□□□□□ -1.27
SCAMP1-205ENST00000614488 LRRC37BQ96QE4 947 aa7.12□□□□□ -1.27
SCAMP1-205ENST00000614488 PTPN18Q99952 460 aa7.12□□□□□ -1.27
SCAMP1-205ENST00000614488 MTG2Q9H4K7 406 aa7.12□□□□□ -1.27
SCAMP1-205ENST00000614488 CTDP1Q9Y5B0 961 aaPredicted RBP7.12□□□□□ -1.27
SCAMP1-205ENST00000614488 PMS2P1A4D2B8 440 aa7.11□□□□□ -1.27
SCAMP1-205ENST00000614488 NEMP1O14524 444 aa7.11□□□□□ -1.27
SCAMP1-205ENST00000614488 BRINP1O60477 761 aa7.11□□□□□ -1.27
SCAMP1-205ENST00000614488 OPHN1O60890 802 aa7.11□□□□□ -1.27
SCAMP1-205ENST00000614488 ULK1O75385 1050 aa7.11□□□□□ -1.27
SCAMP1-205ENST00000614488 APOL3O95236 402 aa7.11□□□□□ -1.27
SCAMP1-205ENST00000614488 ANTXR2P58335 489 aa7.11□□□□□ -1.27
SCAMP1-205ENST00000614488 HGFACQ04756 655 aa7.11□□□□□ -1.27
SCAMP1-205ENST00000614488 CT47A1Q5JQC4 288 aaPredicted RBP7.11□□□□□ -1.27
SCAMP1-205ENST00000614488 FRMD7Q6ZUT3 714 aa7.11□□□□□ -1.27
SCAMP1-205ENST00000614488 UBR7Q8N806 425 aa7.11□□□□□ -1.27
SCAMP1-205ENST00000614488 CFHR4Q92496 578 aa7.11□□□□□ -1.27
SCAMP1-205ENST00000614488 FERMT2Q96AC1 680 aa7.11□□□□□ -1.27
SCAMP1-205ENST00000614488 ZNF496Q96IT1 587 aaPredicted RBP7.11□□□□□ -1.27
SCAMP1-205ENST00000614488 LOXL4Q96JB6 756 aa7.11□□□□□ -1.27
SCAMP1-205ENST00000614488 WNT8AQ9H1J5 351 aa7.11□□□□□ -1.27
SCAMP1-205ENST00000614488 SEMA4AQ9H3S1 761 aa7.11□□□□□ -1.27
SCAMP1-205ENST00000614488 SMPD4Q9NXE4 827 aa7.11□□□□□ -1.27
SCAMP1-205ENST00000614488 PUF60Q9UHX1 559 aaKnown RBP7.11□□□□□ -1.27
SCAMP1-205ENST00000614488 FAM184BQ9ULE4 1060 aa7.11□□□□□ -1.27
SCAMP1-205ENST00000614488 ST20-MTHFSA0A0A6YYL1 179 aa7.1□□□□□ -1.27
SCAMP1-205ENST00000614488 PATE3B3GLJ2 98 aa7.1□□□□□ -1.27
SCAMP1-205ENST00000614488 MATN2O00339 956 aa7.1□□□□□ -1.27
SCAMP1-205ENST00000614488 ELL2O00472 640 aaPredicted RBP7.1□□□□□ -1.27
SCAMP1-205ENST00000614488 CR2P20023 1033 aa7.1□□□□□ -1.27
SCAMP1-205ENST00000614488 MAGEA10P43363 369 aaPredicted RBP7.1□□□□□ -1.27
SCAMP1-205ENST00000614488 STRN3Q13033 797 aa7.1□□□□□ -1.27
SCAMP1-205ENST00000614488 BROXQ5VW32 411 aa7.1□□□□□ -1.27
SCAMP1-205ENST00000614488 PRRT2Q7Z6L0 340 aaPredicted RBP7.1□□□□□ -1.27
SCAMP1-205ENST00000614488 STRA8Q7Z7C7 330 aa7.1□□□□□ -1.27
SCAMP1-205ENST00000614488 RASSF3Q86WH2 238 aa7.1□□□□□ -1.27
SCAMP1-205ENST00000614488 SLC7A6OSQ96CW6 309 aaPredicted RBP7.1□□□□□ -1.27
SCAMP1-205ENST00000614488 WDR92Q96MX6 357 aa7.1□□□□□ -1.27
SCAMP1-205ENST00000614488 SYNPO2Q9UMS6 1093 aa7.1□□□□□ -1.27
SCAMP1-205ENST00000614488 CADPSQ9ULU8 1353 aa7.09□□□□□ -1.27
SCAMP1-205ENST00000614488 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.09□□□□□ -1.27
SCAMP1-205ENST00000614488 RAB11FIP3O75154 756 aa7.09□□□□□ -1.27
SCAMP1-205ENST00000614488 CPEP16870 476 aa7.09□□□□□ -1.27
SCAMP1-205ENST00000614488 SESN3P58005 492 aa7.09□□□□□ -1.27
SCAMP1-205ENST00000614488 ADAM15Q13444 863 aa7.09□□□□□ -1.27
SCAMP1-205ENST00000614488 ZBTB41Q5SVQ8 909 aa7.09□□□□□ -1.27
SCAMP1-205ENST00000614488 UNQ6494/PRO21346Q6UXR6 183 aa7.09□□□□□ -1.27
SCAMP1-205ENST00000614488 CXorf67Q86X51 503 aaPredicted RBP7.09□□□□□ -1.27
SCAMP1-205ENST00000614488 GIMAP8Q8ND71 665 aaPredicted RBP7.09□□□□□ -1.27
SCAMP1-205ENST00000614488 HIST1H2AHQ96KK5 128 aa7.09□□□□□ -1.27
SCAMP1-205ENST00000614488 GNRHR2Q96P88 292 aa7.09□□□□□ -1.27
SCAMP1-205ENST00000614488 HIST1H2AJQ99878 128 aa7.09□□□□□ -1.27
SCAMP1-205ENST00000614488 MAGEL2Q9UJ55 1249 aa7.09□□□□□ -1.27
SCAMP1-205ENST00000614488 MYPNQ86TC9 1320 aa7.08□□□□□ -1.28
SCAMP1-205ENST00000614488 KDM1AO60341 852 aa7.08□□□□□ -1.28
SCAMP1-205ENST00000614488 CDC14BO60729 498 aa7.08□□□□□ -1.28
SCAMP1-205ENST00000614488 RPS19P39019 145 aaKnown RBP7.08□□□□□ -1.28
SCAMP1-205ENST00000614488 BUD31P41223 144 aaPredicted RBP7.08□□□□□ -1.28
SCAMP1-205ENST00000614488 ID4P47928 161 aa7.08□□□□□ -1.28
SCAMP1-205ENST00000614488 DUSP8Q13202 625 aa7.08□□□□□ -1.28
SCAMP1-205ENST00000614488 ICAM4Q14773 271 aa7.08□□□□□ -1.28
SCAMP1-205ENST00000614488 TCTN3Q6NUS6 607 aa7.08□□□□□ -1.28
SCAMP1-205ENST00000614488 TAX1BP1Q86VP1 789 aa7.08□□□□□ -1.28
SCAMP1-205ENST00000614488 CHST13Q8NET6 341 aa7.08□□□□□ -1.28
SCAMP1-205ENST00000614488 OR14K1Q8NGZ2 314 aa7.08□□□□□ -1.28
SCAMP1-205ENST00000614488 DPYSL5Q9BPU6 564 aa7.08□□□□□ -1.28
SCAMP1-205ENST00000614488 NOL10Q9BSC4 688 aaKnown RBP7.08□□□□□ -1.28
SCAMP1-205ENST00000614488 OSBPL6Q9BZF3 934 aa7.08□□□□□ -1.28
SCAMP1-205ENST00000614488 MS4A5Q9H3V2 200 aa7.08□□□□□ -1.28
SCAMP1-205ENST00000614488 CD248Q9HCU0 757 aa7.08□□□□□ -1.28
SCAMP1-205ENST00000614488 PCDHB6Q9Y5E3 794 aa7.08□□□□□ -1.28
SCAMP1-205ENST00000614488 SLC30A1Q9Y6M5 507 aa7.08□□□□□ -1.28
SCAMP1-205ENST00000614488 SLC26A4O43511 780 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms