RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 PAGE5Q96GU1 130 aa11.74□□□□□ -0.53
FAM3A-221ENST00000612856 MAP3K14Q99558 947 aa11.74□□□□□ -0.53
FAM3A-221ENST00000612856 YIPF3Q9GZM5 350 aa11.74□□□□□ -0.53
FAM3A-221ENST00000612856 FAM149B1Q96BN6 582 aa11.74□□□□□ -0.53
FAM3A-221ENST00000612856 EIF2AK1Q9BQI3 630 aaKnown RBP11.74□□□□□ -0.53
FAM3A-221ENST00000612856 MED10Q9BTT4 135 aa11.74□□□□□ -0.53
FAM3A-221ENST00000612856 ZNF302Q9NR11 478 aa11.74□□□□□ -0.53
FAM3A-221ENST00000612856 LRFN2Q9ULH4 789 aa11.74□□□□□ -0.53
FAM3A-221ENST00000612856 TLDC2A0PJX2 215 aa11.73□□□□□ -0.53
FAM3A-221ENST00000612856 ZNF185O15231 689 aa11.73□□□□□ -0.53
FAM3A-221ENST00000612856 ARP10275 920 aa11.73□□□□□ -0.53
FAM3A-221ENST00000612856 PTPREP23469 700 aa11.73□□□□□ -0.53
FAM3A-221ENST00000612856 TRAPPC10P48553 1259 aa11.73□□□□□ -0.53
FAM3A-221ENST00000612856 NNTQ13423 1086 aa11.73□□□□□ -0.53
FAM3A-221ENST00000612856 MFSD14CQ5VZR4 134 aa11.73□□□□□ -0.53
FAM3A-221ENST00000612856 TRIM68Q6AZZ1 485 aa11.73□□□□□ -0.53
FAM3A-221ENST00000612856 HIBCHQ6NVY1 386 aaPredicted RBP11.73□□□□□ -0.53
FAM3A-221ENST00000612856 SCYL2Q6P3W7 929 aa11.73□□□□□ -0.53
FAM3A-221ENST00000612856 DCUN1D2Q6PH85 259 aa11.73□□□□□ -0.53
FAM3A-221ENST00000612856 CYP26C1Q6V0L0 522 aa11.73□□□□□ -0.53
FAM3A-221ENST00000612856 RNF217Q8TC41 542 aa11.73□□□□□ -0.53
FAM3A-221ENST00000612856 NUDT12Q9BQG2 462 aa11.73□□□□□ -0.53
FAM3A-221ENST00000612856 TRIM31Q9BZY9 425 aa11.73□□□□□ -0.53
FAM3A-221ENST00000612856 ASCC2Q9H1I8 757 aaPredicted RBP11.73□□□□□ -0.53
FAM3A-221ENST00000612856 JPH1Q9HDC5 661 aaPredicted RBP11.73□□□□□ -0.53
FAM3A-221ENST00000612856 KCNH7Q9NS40 1196 aa11.73□□□□□ -0.53
FAM3A-221ENST00000612856 FBXO2Q9UK22 296 aaPredicted RBP11.73□□□□□ -0.53
FAM3A-221ENST00000612856 CNTNAP5Q8WYK1 1306 aa11.73□□□□□ -0.53
FAM3A-221ENST00000612856 NHSL1Q5SYE7 1610 aa11.73□□□□□ -0.53
FAM3A-221ENST00000612856 PALM3A6NDB9 673 aaPredicted RBP11.73□□□□□ -0.53
FAM3A-221ENST00000612856 STXBP3O00186 592 aa11.73□□□□□ -0.53
FAM3A-221ENST00000612856 SPOPO43791 374 aa11.73□□□□□ -0.53
FAM3A-221ENST00000612856 SLC37A4O43826 429 aa11.73□□□□□ -0.53
FAM3A-221ENST00000612856 RARBP10826 455 aa11.73□□□□□ -0.53
FAM3A-221ENST00000612856 QARSP47897 775 aaKnown RBP11.73□□□□□ -0.53
FAM3A-221ENST00000612856 TMTC1Q8IUR5 882 aa11.73□□□□□ -0.53
FAM3A-221ENST00000612856 DYDC1Q8WWB3 177 aa11.73□□□□□ -0.53
FAM3A-221ENST00000612856 CNOT6LQ96LI5 555 aaKnown RBP11.73□□□□□ -0.53
FAM3A-221ENST00000612856 GPRC5CQ9NQ84 441 aa11.73□□□□□ -0.53
FAM3A-221ENST00000612856 HPCAL4Q9UM19 191 aa11.73□□□□□ -0.53
FAM3A-221ENST00000612856 CRYBG1Q9Y4K1 1723 aa11.73□□□□□ -0.53
FAM3A-221ENST00000612856 DENND3A2RUS2 1198 aa11.73□□□□□ -0.53
FAM3A-221ENST00000612856 ATXN8OSP0DMR3 200 aa11.73□□□□□ -0.53
FAM3A-221ENST00000612856 PTPRAP18433 802 aa11.73□□□□□ -0.53
FAM3A-221ENST00000612856 PSMC4P43686 418 aa11.73□□□□□ -0.53
FAM3A-221ENST00000612856 NUMBP49757 651 aa11.73□□□□□ -0.53
FAM3A-221ENST00000612856 MRRFQ96E11 262 aaKnown RBP11.73□□□□□ -0.53
FAM3A-221ENST00000612856 CTTNBP2NLQ9P2B4 639 aa11.73□□□□□ -0.53
FAM3A-221ENST00000612856 SLC9A2Q9UBY0 812 aa11.73□□□□□ -0.53
FAM3A-221ENST00000612856 GLTPD2A6NH11 291 aa11.72□□□□□ -0.53
FAM3A-221ENST00000612856 CYP27A1Q02318 531 aa11.72□□□□□ -0.53
FAM3A-221ENST00000612856 MYO1EQ12965 1108 aa11.72□□□□□ -0.53
FAM3A-221ENST00000612856 C8orf74Q6P047 294 aa11.72□□□□□ -0.53
FAM3A-221ENST00000612856 U2AF1L4Q8WU68 220 aaKnown RBP11.72□□□□□ -0.53
FAM3A-221ENST00000612856 FAM213AQ9BRX8 229 aa11.72□□□□□ -0.53
FAM3A-221ENST00000612856 SPZ1Q9BXG8 430 aa11.72□□□□□ -0.53
FAM3A-221ENST00000612856 EPN1Q9Y6I3 576 aaPredicted RBP11.72□□□□□ -0.53
FAM3A-221ENST00000612856 KRT14P02533 472 aa11.72□□□□□ -0.53
FAM3A-221ENST00000612856 KCNJ6P48051 423 aa11.72□□□□□ -0.53
FAM3A-221ENST00000612856 GCLMP48507 274 aa11.72□□□□□ -0.53
FAM3A-221ENST00000612856 MMP14P50281 582 aa11.72□□□□□ -0.53
FAM3A-221ENST00000612856 FAM186BQ8IYM0 893 aa11.72□□□□□ -0.53
FAM3A-221ENST00000612856 ALS2CR12Q96Q35 445 aa11.72□□□□□ -0.53
FAM3A-221ENST00000612856 TUBGCP2Q9BSJ2 902 aa11.72□□□□□ -0.53
FAM3A-221ENST00000612856 TMX2Q9Y320 296 aa11.72□□□□□ -0.53
FAM3A-221ENST00000612856 PCDHA10Q9Y5I2 948 aa11.72□□□□□ -0.53
FAM3A-221ENST00000612856 ESYT3A0FGR9 886 aa11.72□□□□□ -0.53
FAM3A-221ENST00000612856 MEFVO15553 781 aaPredicted RBP11.72□□□□□ -0.53
FAM3A-221ENST00000612856 CYTH3O43739 400 aa11.72□□□□□ -0.53
FAM3A-221ENST00000612856 TRIM49P0CI25 452 aa11.72□□□□□ -0.53
FAM3A-221ENST00000612856 TRIM49CP0CI26 452 aa11.72□□□□□ -0.53
FAM3A-221ENST00000612856 PRELPP51888 382 aa11.72□□□□□ -0.53
FAM3A-221ENST00000612856 SKIV2LQ15477 1246 aaKnown RBP11.72□□□□□ -0.53
FAM3A-221ENST00000612856 TAF1DQ9H5J8 278 aaPredicted RBP11.72□□□□□ -0.53
FAM3A-221ENST00000612856 NUP188Q5SRE5 1749 aa11.72□□□□□ -0.53
FAM3A-221ENST00000612856 PPP1R12AO14974 1030 aaPredicted RBP11.71□□□□□ -0.53
FAM3A-221ENST00000612856 ZBTB39O15060 712 aa11.71□□□□□ -0.53
FAM3A-221ENST00000612856 AP3B2Q13367 1082 aa11.71□□□□□ -0.53
FAM3A-221ENST00000612856 LY6KQ17RY6 165 aa11.71□□□□□ -0.53
FAM3A-221ENST00000612856 RSPH3Q86UC2 560 aa11.71□□□□□ -0.53
FAM3A-221ENST00000612856 ZBTB10Q96DT7 871 aa11.71□□□□□ -0.53
FAM3A-221ENST00000612856 DNAI2Q9GZS0 605 aa11.71□□□□□ -0.53
FAM3A-221ENST00000612856 STK38LQ9Y2H1 464 aa11.71□□□□□ -0.53
FAM3A-221ENST00000612856 GOLGA8SH3BPF8 625 aa11.71□□□□□ -0.53
FAM3A-221ENST00000612856 BUB1O43683 1085 aa11.71□□□□□ -0.53
FAM3A-221ENST00000612856 MAGEA1P43355 309 aa11.71□□□□□ -0.53
FAM3A-221ENST00000612856 DEFB115Q30KQ5 88 aa11.71□□□□□ -0.53
FAM3A-221ENST00000612856 ZC2HC1CQ53FD0 456 aaPredicted RBP11.71□□□□□ -0.53
FAM3A-221ENST00000612856 SWT1Q5T5J6 900 aaKnown RBP11.71□□□□□ -0.53
FAM3A-221ENST00000612856 TRAPPC12Q8WVT3 735 aa11.71□□□□□ -0.53
FAM3A-221ENST00000612856 HNRNPLLQ8WVV9 542 aaKnown RBP11.71□□□□□ -0.53
FAM3A-221ENST00000612856 FAM167BQ9BTA0 163 aa11.71□□□□□ -0.53
FAM3A-221ENST00000612856 MSTO1Q9BUK6 570 aa11.71□□□□□ -0.53
FAM3A-221ENST00000612856 PHF20Q9BVI0 1012 aa11.71□□□□□ -0.53
FAM3A-221ENST00000612856 KIF9Q9HAQ2 790 aa11.71□□□□□ -0.53
FAM3A-221ENST00000612856 STK36Q9NRP7 1315 aa11.71□□□□□ -0.53
FAM3A-221ENST00000612856 COL16A1Q07092 1604 aaPredicted RBP11.71□□□□□ -0.53
FAM3A-221ENST00000612856 BAZ2AQ9UIF9 1905 aaKnown RBP11.71□□□□□ -0.53
FAM3A-221ENST00000612856 EIF3HO15372 352 aaKnown RBP eCLIP11.71□□□□□ -0.54
FAM3A-221ENST00000612856 ATP1A1P05023 1023 aaKnown RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms