RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 PPFIBP1Q86W92 1011 aa11.78□□□□□ -0.52
SSX3-204ENST00000612497 KIAA0319LQ8IZA0 1049 aa11.78□□□□□ -0.52
SSX3-204ENST00000612497 GPR152Q8TDT2 470 aa11.78□□□□□ -0.52
SSX3-204ENST00000612497 ATRIPQ8WXE1 791 aa11.78□□□□□ -0.52
SSX3-204ENST00000612497 OSMRQ99650 979 aa11.78□□□□□ -0.52
SSX3-204ENST00000612497 ZBP1Q9H171 429 aa11.78□□□□□ -0.52
SSX3-204ENST00000612497 JPH1Q9HDC5 661 aaPredicted RBP11.78□□□□□ -0.52
SSX3-204ENST00000612497 ARHGEF3Q9NR81 526 aa11.78□□□□□ -0.52
SSX3-204ENST00000612497 CYTH3O43739 400 aa11.77□□□□□ -0.53
SSX3-204ENST00000612497 CTSAP10619 480 aa11.77□□□□□ -0.53
SSX3-204ENST00000612497 CRYBB1P53674 252 aaPredicted RBP11.77□□□□□ -0.53
SSX3-204ENST00000612497 MFAP1P55081 439 aaKnown RBP11.77□□□□□ -0.53
SSX3-204ENST00000612497 COL9A3Q14050 684 aaPredicted RBP11.77□□□□□ -0.53
SSX3-204ENST00000612497 PTPN14Q15678 1187 aa11.77□□□□□ -0.53
SSX3-204ENST00000612497 KIZQ2M2Z5 673 aa11.77□□□□□ -0.53
SSX3-204ENST00000612497 PPM1JQ5JR12 505 aa11.77□□□□□ -0.53
SSX3-204ENST00000612497 CLLU1OSQ5K130 101 aa11.77□□□□□ -0.53
SSX3-204ENST00000612497 DCLRE1AQ6PJP8 1040 aa11.77□□□□□ -0.53
SSX3-204ENST00000612497 PLPPR4Q7Z2D5 763 aa11.77□□□□□ -0.53
SSX3-204ENST00000612497 ECHDC2Q86YB7 292 aa11.77□□□□□ -0.53
SSX3-204ENST00000612497 MAML2Q8IZL2 1156 aaPredicted RBP11.77□□□□□ -0.53
SSX3-204ENST00000612497 PJA1Q8NG27 643 aa11.77□□□□□ -0.53
SSX3-204ENST00000612497 HELQQ8TDG4 1101 aa11.77□□□□□ -0.53
SSX3-204ENST00000612497 BORCS6Q96GS4 357 aa11.77□□□□□ -0.53
SSX3-204ENST00000612497 FOXQ1Q9C009 403 aa11.77□□□□□ -0.53
SSX3-204ENST00000612497 KRT23Q9C075 422 aa11.77□□□□□ -0.53
SSX3-204ENST00000612497 SPATA6Q9NWH7 488 aaPredicted RBP11.77□□□□□ -0.53
SSX3-204ENST00000612497 SLC9A2Q9UBY0 812 aa11.77□□□□□ -0.53
SSX3-204ENST00000612497 IRAK3Q9Y616 596 aa11.77□□□□□ -0.53
SSX3-204ENST00000612497 DOCK8Q8NF50 2099 aa11.77□□□□□ -0.53
SSX3-204ENST00000612497 MEIS2O14770 477 aa11.76□□□□□ -0.53
SSX3-204ENST00000612497 LAMTOR5O43504 91 aa11.76□□□□□ -0.53
SSX3-204ENST00000612497 N4BP1O75113 896 aaKnown RBP11.76□□□□□ -0.53
SSX3-204ENST00000612497 LRRN2O75325 713 aa11.76□□□□□ -0.53
SSX3-204ENST00000612497 GLULP15104 373 aa11.76□□□□□ -0.53
SSX3-204ENST00000612497 ZSCAN20P17040 1043 aaPredicted RBP11.76□□□□□ -0.53
SSX3-204ENST00000612497 KLRC2P26717 231 aa11.76□□□□□ -0.53
SSX3-204ENST00000612497 POLGP54098 1239 aaPredicted RBP11.76□□□□□ -0.53
SSX3-204ENST00000612497 GRM4Q14833 912 aa11.76□□□□□ -0.53
SSX3-204ENST00000612497 ZNF528Q3MIS6 628 aa11.76□□□□□ -0.53
SSX3-204ENST00000612497 C20orf194Q5TEA3 1177 aa11.76□□□□□ -0.53
SSX3-204ENST00000612497 C15orf39Q6ZRI6 1047 aa11.76□□□□□ -0.53
SSX3-204ENST00000612497 STAMQ92783 540 aa11.76□□□□□ -0.53
SSX3-204ENST00000612497 SMG5Q9UPR3 1016 aaKnown RBP11.76□□□□□ -0.53
SSX3-204ENST00000612497 PIK3CDO00329 1044 aa11.75□□□□□ -0.53
SSX3-204ENST00000612497 HBP1O60381 514 aa11.75□□□□□ -0.53
SSX3-204ENST00000612497 ZC3H11AO75152 810 aaKnown RBP eCLIP11.75□□□□□ -0.53
SSX3-204ENST00000612497 VTNP04004 478 aa11.75□□□□□ -0.53
SSX3-204ENST00000612497 ACTR2P61160 394 aa11.75□□□□□ -0.53
SSX3-204ENST00000612497 CSTF1Q05048 431 aaKnown RBP11.75□□□□□ -0.53
SSX3-204ENST00000612497 DMWDQ09019 674 aa11.75□□□□□ -0.53
SSX3-204ENST00000612497 SEC23AQ15436 765 aa11.75□□□□□ -0.53
SSX3-204ENST00000612497 DDX53Q86TM3 631 aaKnown RBP11.75□□□□□ -0.53
SSX3-204ENST00000612497 TMEM173Q86WV6 379 aaPredicted RBP11.75□□□□□ -0.53
SSX3-204ENST00000612497 NXPE3Q969Y0 559 aa11.75□□□□□ -0.53
SSX3-204ENST00000612497 SDF4Q9BRK5 362 aa11.75□□□□□ -0.53
SSX3-204ENST00000612497 EMILIN2Q9BXX0 1053 aa11.75□□□□□ -0.53
SSX3-204ENST00000612497 MRPL9Q9BYD2 267 aaKnown RBP11.75□□□□□ -0.53
SSX3-204ENST00000612497 BCO2Q9BYV7 579 aa11.75□□□□□ -0.53
SSX3-204ENST00000612497 CNNM2Q9H8M5 875 aa11.75□□□□□ -0.53
SSX3-204ENST00000612497 JADE2Q9NQC1 790 aa11.75□□□□□ -0.53
SSX3-204ENST00000612497 SH2B1Q9NRF2 756 aaPredicted RBP11.75□□□□□ -0.53
SSX3-204ENST00000612497 EPS15L1Q9UBC2 864 aa11.75□□□□□ -0.53
SSX3-204ENST00000612497 ZBTB47Q9UFB7 747 aaPredicted RBP11.75□□□□□ -0.53
SSX3-204ENST00000612497 FBXO4Q9UKT5 387 aa11.75□□□□□ -0.53
SSX3-204ENST00000612497 PCDHGA2Q9Y5H1 932 aa11.75□□□□□ -0.53
SSX3-204ENST00000612497 UBIAD1Q9Y5Z9 338 aa11.75□□□□□ -0.53
SSX3-204ENST00000612497 PKD1L2Q7Z442 2459 aa11.75□□□□□ -0.53
SSX3-204ENST00000612497 FASNP49327 2511 aaKnown RBP11.74□□□□□ -0.53
SSX3-204ENST00000612497 MAFGO15525 162 aa11.74□□□□□ -0.53
SSX3-204ENST00000612497 SLC26A2P50443 739 aa11.74□□□□□ -0.53
SSX3-204ENST00000612497 CLCN4P51793 760 aa11.74□□□□□ -0.53
SSX3-204ENST00000612497 ACAP1Q15027 740 aa11.74□□□□□ -0.53
SSX3-204ENST00000612497 IMMTQ16891 758 aaKnown RBP11.74□□□□□ -0.53
SSX3-204ENST00000612497 METTL13Q8N6R0 699 aa11.74□□□□□ -0.53
SSX3-204ENST00000612497 IGSF21Q96ID5 467 aa11.74□□□□□ -0.53
SSX3-204ENST00000612497 SHDQ96IW2 340 aa11.74□□□□□ -0.53
SSX3-204ENST00000612497 MYADMQ96S97 322 aa11.74□□□□□ -0.53
SSX3-204ENST00000612497 WDR6Q9NNW5 1121 aaKnown RBP11.74□□□□□ -0.53
SSX3-204ENST00000612497 GMEB2Q9UKD1 530 aa11.74□□□□□ -0.53
SSX3-204ENST00000612497 SALL3Q9BXA9 1300 aa11.74□□□□□ -0.53
SSX3-204ENST00000612497 PATJQ8NI35 1801 aa11.74□□□□□ -0.53
SSX3-204ENST00000612497 MYH9P35579 1960 aaKnown RBP11.74□□□□□ -0.53
SSX3-204ENST00000612497 CCDC195A0A1B0GUA6 201 aa11.73□□□□□ -0.53
SSX3-204ENST00000612497 CNOT1A5YKK6 2376 aaKnown RBP11.73□□□□□ -0.53
SSX3-204ENST00000612497 BACH1O14867 736 aa11.73□□□□□ -0.53
SSX3-204ENST00000612497 CLUHO75153 1309 aa11.73□□□□□ -0.53
SSX3-204ENST00000612497 GPR32O75388 356 aa11.73□□□□□ -0.53
SSX3-204ENST00000612497 SSBP05455 408 aaKnown RBP eCLIP11.73□□□□□ -0.53
SSX3-204ENST00000612497 TGM1P22735 817 aa11.73□□□□□ -0.53
SSX3-204ENST00000612497 FXR2P51116 673 aaKnown RBP eCLIP11.73□□□□□ -0.53
SSX3-204ENST00000612497 ZNF484Q5JVG2 852 aa11.73□□□□□ -0.53
SSX3-204ENST00000612497 RALGAPA1Q6GYQ0 2036 aa11.73□□□□□ -0.53
SSX3-204ENST00000612497 TICAM2Q86XR7 235 aa11.73□□□□□ -0.53
SSX3-204ENST00000612497 ST13P5Q8NFI4 369 aaPredicted RBP11.73□□□□□ -0.53
SSX3-204ENST00000612497 RILPL2Q969X0 211 aa11.73□□□□□ -0.53
SSX3-204ENST00000612497 KLHL5Q96PQ7 755 aa11.73□□□□□ -0.53
SSX3-204ENST00000612497 EPC1Q9H2F5 836 aa11.73□□□□□ -0.53
SSX3-204ENST00000612497 PARD6AQ9NPB6 346 aa11.73□□□□□ -0.53
SSX3-204ENST00000612497 ZSCAN32Q9NX65 697 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms