RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 FOXN3O00409 490 aaPredicted RBP15.25■□□□□ 0.03
COL6A1-207ENST00000612273 PDXKO00764 312 aa15.25■□□□□ 0.03
COL6A1-207ENST00000612273 PPP1R12BO60237 982 aaPredicted RBP15.25■□□□□ 0.03
COL6A1-207ENST00000612273 HSPA9P38646 679 aaKnown RBP15.25■□□□□ 0.03
COL6A1-207ENST00000612273 DLG4P78352 724 aa15.25■□□□□ 0.03
COL6A1-207ENST00000612273 CCDC26Q8TAB7 109 aa15.25■□□□□ 0.03
COL6A1-207ENST00000612273 SWAP70Q9UH65 585 aa15.25■□□□□ 0.03
COL6A1-207ENST00000612273 STRCQ7RTU9 1775 aa15.25■□□□□ 0.03
COL6A1-207ENST00000612273 CLRN2A0PK11 232 aa15.25■□□□□ 0.03
COL6A1-207ENST00000612273 CAND2O75155 1236 aa15.25■□□□□ 0.03
COL6A1-207ENST00000612273 GCLMP48507 274 aa15.25■□□□□ 0.03
COL6A1-207ENST00000612273 ABCB5Q2M3G0 1257 aa15.25■□□□□ 0.03
COL6A1-207ENST00000612273 HS2ST1Q7LGA3 356 aa15.25■□□□□ 0.03
COL6A1-207ENST00000612273 MGARPQ8TDB4 240 aa15.25■□□□□ 0.03
COL6A1-207ENST00000612273 ALG3Q92685 438 aa15.25■□□□□ 0.03
COL6A1-207ENST00000612273 KRT35Q92764 455 aa15.25■□□□□ 0.03
COL6A1-207ENST00000612273 C18orf8Q96DM3 657 aa15.25■□□□□ 0.03
COL6A1-207ENST00000612273 UBE2TQ9NPD8 197 aaPredicted RBP15.25■□□□□ 0.03
COL6A1-207ENST00000612273 TRAF3IP3Q9Y228 551 aa15.25■□□□□ 0.03
COL6A1-207ENST00000612273 FOXO6A8MYZ6 492 aa15.25■□□□□ 0.03
COL6A1-207ENST00000612273 PPP1R18Q6NYC8 613 aa15.25■□□□□ 0.03
COL6A1-207ENST00000612273 CCDC121Q6ZUS5 278 aa15.25■□□□□ 0.03
COL6A1-207ENST00000612273 SH3BP5LQ7L8J4 393 aa15.25■□□□□ 0.03
COL6A1-207ENST00000612273 CEP57Q86XR8 500 aa15.25■□□□□ 0.03
COL6A1-207ENST00000612273 FMO2Q99518 471 aa15.25■□□□□ 0.03
COL6A1-207ENST00000612273 WRAP73Q9P2S5 460 aaPredicted RBP15.25■□□□□ 0.03
COL6A1-207ENST00000612273 TNRC6CQ9HCJ0 1690 aaKnown RBP15.24■□□□□ 0.03
COL6A1-207ENST00000612273 A0A1W2PRG0 241 aa15.24■□□□□ 0.03
COL6A1-207ENST00000612273 GUCY2CP25092 1073 aa15.24■□□□□ 0.03
COL6A1-207ENST00000612273 PSMC2P35998 433 aaKnown RBP15.24■□□□□ 0.03
COL6A1-207ENST00000612273 CRY2Q49AN0 593 aa15.24■□□□□ 0.03
COL6A1-207ENST00000612273 HYIQ5T013 277 aa15.24■□□□□ 0.03
COL6A1-207ENST00000612273 SYDE2Q5VT97 1194 aa15.24■□□□□ 0.03
COL6A1-207ENST00000612273 DCAF12L1Q5VU92 463 aa15.24■□□□□ 0.03
COL6A1-207ENST00000612273 OTUD6AQ7L8S5 288 aa15.24■□□□□ 0.03
COL6A1-207ENST00000612273 COA1Q9GZY4 146 aa15.24■□□□□ 0.03
COL6A1-207ENST00000612273 TMX4Q9H1E5 349 aaPredicted RBP15.24■□□□□ 0.03
COL6A1-207ENST00000612273 TCP10L2B9ZVM9 353 aa15.24■□□□□ 0.03
COL6A1-207ENST00000612273 F8VZ95 297 aa15.24■□□□□ 0.03
COL6A1-207ENST00000612273 GAS7O60861 476 aa15.24■□□□□ 0.03
COL6A1-207ENST00000612273 TRIM37O94972 964 aa15.24■□□□□ 0.03
COL6A1-207ENST00000612273 FGFR4P22455 802 aa15.24■□□□□ 0.03
COL6A1-207ENST00000612273 TNFRSF8P28908 595 aa15.24■□□□□ 0.03
COL6A1-207ENST00000612273 NOVP48745 357 aa15.24■□□□□ 0.03
COL6A1-207ENST00000612273 FMO5P49326 533 aa15.24■□□□□ 0.03
COL6A1-207ENST00000612273 VPS41P49754 854 aa15.24■□□□□ 0.03
COL6A1-207ENST00000612273 DR1Q01658 176 aa15.24■□□□□ 0.03
COL6A1-207ENST00000612273 C2CD6Q53TS8 623 aa15.24■□□□□ 0.03
COL6A1-207ENST00000612273 DPY19L2P1Q6NXN4 242 aa15.24■□□□□ 0.03
COL6A1-207ENST00000612273 PPP4R3CPQ6ZMV5 832 aa15.24■□□□□ 0.03
COL6A1-207ENST00000612273 FBXO25Q8TCJ0 367 aa15.24■□□□□ 0.03
COL6A1-207ENST00000612273 ACER1Q8TDN7 264 aa15.24■□□□□ 0.03
COL6A1-207ENST00000612273 LMBR1Q8WVP7 490 aa15.24■□□□□ 0.03
COL6A1-207ENST00000612273 CCDC127Q96BQ5 260 aa15.24■□□□□ 0.03
COL6A1-207ENST00000612273 TMEM59LQ9UK28 342 aa15.24■□□□□ 0.03
COL6A1-207ENST00000612273 FRMD4BQ9Y2L6 1034 aa15.24■□□□□ 0.03
COL6A1-207ENST00000612273 BZW2Q9Y6E2 419 aaKnown RBP15.24■□□□□ 0.03
COL6A1-207ENST00000612273 MYH7BA7E2Y1 1941 aa15.24■□□□□ 0.03
COL6A1-207ENST00000612273 GMNCA6NCL1 334 aa15.23■□□□□ 0.03
COL6A1-207ENST00000612273 SOX5P35711 763 aa15.23■□□□□ 0.03
COL6A1-207ENST00000612273 MARSP56192 900 aaKnown RBP15.23■□□□□ 0.03
COL6A1-207ENST00000612273 RAPGEF5Q92565 580 aa15.23■□□□□ 0.03
COL6A1-207ENST00000612273 WDR18Q9BV38 432 aa15.23■□□□□ 0.03
COL6A1-207ENST00000612273 HOMER2Q9NSB8 354 aa15.23■□□□□ 0.03
COL6A1-207ENST00000612273 COG5Q9UP83 839 aa15.23■□□□□ 0.03
COL6A1-207ENST00000612273 CTNND1O60716 968 aaKnown RBP15.23■□□□□ 0.03
COL6A1-207ENST00000612273 BMP3P12645 472 aa15.23■□□□□ 0.03
COL6A1-207ENST00000612273 TMC3Q7Z5M5 1100 aa15.23■□□□□ 0.03
COL6A1-207ENST00000612273 ACTRT1Q8TDG2 376 aa15.23■□□□□ 0.03
COL6A1-207ENST00000612273 SCLT1Q96NL6 688 aa15.23■□□□□ 0.03
COL6A1-207ENST00000612273 PARVGQ9HBI0 331 aa15.23■□□□□ 0.03
COL6A1-207ENST00000612273 PLCB1Q9NQ66 1216 aa15.23■□□□□ 0.03
COL6A1-207ENST00000612273 FBXO28Q9NVF7 368 aa15.23■□□□□ 0.03
COL6A1-207ENST00000612273 DDX20Q9UHI6 824 aaKnown RBP15.23■□□□□ 0.03
COL6A1-207ENST00000612273 DAAM1Q9Y4D1 1078 aa15.23■□□□□ 0.03
COL6A1-207ENST00000612273 PITPNM2Q9BZ72 1349 aa15.23■□□□□ 0.03
COL6A1-207ENST00000612273 SLITRK3O94933 977 aa15.23■□□□□ 0.03
COL6A1-207ENST00000612273 SNX1Q13596 522 aa15.23■□□□□ 0.03
COL6A1-207ENST00000612273 CUL1Q13616 776 aa15.23■□□□□ 0.03
COL6A1-207ENST00000612273 RRP1BQ14684 758 aaKnown RBP15.23■□□□□ 0.03
COL6A1-207ENST00000612273 TRIP13Q15645 432 aaPredicted RBP15.23■□□□□ 0.03
COL6A1-207ENST00000612273 MEX3CQ5U5Q3 659 aaKnown RBP15.23■□□□□ 0.03
COL6A1-207ENST00000612273 POP1Q99575 1024 aaKnown RBP15.23■□□□□ 0.03
COL6A1-207ENST00000612273 INTS2Q9H0H0 1204 aaKnown RBP15.23■□□□□ 0.03
COL6A1-207ENST00000612273 METTL14Q9HCE5 456 aaKnown RBP15.23■□□□□ 0.03
COL6A1-207ENST00000612273 FAM198AQ9UFP1 575 aa15.23■□□□□ 0.03
COL6A1-207ENST00000612273 H0YGN5 161 aa15.22■□□□□ 0.03
COL6A1-207ENST00000612273 OPLAHO14841 1288 aa15.22■□□□□ 0.03
COL6A1-207ENST00000612273 FAM107AO95990 144 aa15.22■□□□□ 0.03
COL6A1-207ENST00000612273 FTLP02792 175 aaPredicted RBP15.22■□□□□ 0.03
COL6A1-207ENST00000612273 ARP10275 920 aa15.22■□□□□ 0.03
COL6A1-207ENST00000612273 FERP16591 822 aa15.22■□□□□ 0.03
COL6A1-207ENST00000612273 PPP2R2AP63151 447 aa15.22■□□□□ 0.03
COL6A1-207ENST00000612273 MYL7Q01449 175 aa15.22■□□□□ 0.03
COL6A1-207ENST00000612273 LRRC14Q15048 493 aa15.22■□□□□ 0.03
COL6A1-207ENST00000612273 PHLDB3Q6NSJ2 640 aa15.22■□□□□ 0.03
COL6A1-207ENST00000612273 FAM118BQ9BPY3 351 aa15.22■□□□□ 0.03
COL6A1-207ENST00000612273 PI4KBQ9UBF8 816 aa15.22■□□□□ 0.03
COL6A1-207ENST00000612273 NFS1Q9Y697 457 aa15.22■□□□□ 0.03
COL6A1-207ENST00000612273 SMCHD1A6NHR9 2005 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms