RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 SYCP3Q8IZU3 236 aa11.38□□□□□ -0.59
PABPC1-224ENST00000610907 SYCE1Q8N0S2 351 aa11.38□□□□□ -0.59
PABPC1-224ENST00000610907 EIF1ADQ8N9N8 165 aaKnown RBP11.38□□□□□ -0.59
PABPC1-224ENST00000610907 HOOK2Q96ED9 719 aa11.38□□□□□ -0.59
PABPC1-224ENST00000610907 ACCSQ96QU6 501 aa11.38□□□□□ -0.59
PABPC1-224ENST00000610907 SELENOOQ9BVL4 669 aa11.38□□□□□ -0.59
PABPC1-224ENST00000610907 MAF1Q9H063 256 aa11.38□□□□□ -0.59
PABPC1-224ENST00000610907 AGO4Q9HCK5 861 aaKnown RBP11.38□□□□□ -0.59
PABPC1-224ENST00000610907 CALCOCO1Q9P1Z2 691 aa11.38□□□□□ -0.59
PABPC1-224ENST00000610907 VPS18Q9P253 973 aa11.38□□□□□ -0.59
PABPC1-224ENST00000610907 WRAP73Q9P2S5 460 aaPredicted RBP11.38□□□□□ -0.59
PABPC1-224ENST00000610907 PMM2O15305 246 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 EXOC3O60645 756 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 ZBED4O75132 1171 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 KRT13P13646 458 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 SFNP31947 248 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 CXCR5P32302 372 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 JAK3P52333 1124 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 TNNC1P63316 161 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 BFSP1Q12934 665 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 SF3B2Q13435 895 aaKnown RBP11.37□□□□□ -0.59
PABPC1-224ENST00000610907 RASA3Q14644 834 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 NBPF9Q3BBW0 867 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 ALS2CLQ60I27 953 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 SLFN11Q7Z7L1 901 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 C4orf19Q8IY42 314 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 DAW1Q8N136 415 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 GOLGA6L1Q8N7Z2 621 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 BANK1Q8NDB2 785 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 RDM1Q8NG50 284 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 SLC30A5Q8TAD4 765 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 SYTL5Q8TDW5 730 aaPredicted RBP11.37□□□□□ -0.59
PABPC1-224ENST00000610907 JDP2Q8WYK2 163 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 CAVIN3Q969G5 261 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 INPP4AQ96PE3 977 aaPredicted RBP11.37□□□□□ -0.59
PABPC1-224ENST00000610907 PACSIN1Q9BY11 444 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 GLIS2Q9BZE0 524 aaPredicted RBP11.37□□□□□ -0.59
PABPC1-224ENST00000610907 BCAS3Q9H6U6 928 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 RNF216Q9NWF9 866 aaPredicted RBP11.37□□□□□ -0.59
PABPC1-224ENST00000610907 PIM2Q9P1W9 311 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 DMGDHQ9UI17 866 aaKnown RBP11.37□□□□□ -0.59
PABPC1-224ENST00000610907 ZHX1Q9UKY1 873 aaPredicted RBP11.37□□□□□ -0.59
PABPC1-224ENST00000610907 ZHX2Q9Y6X8 837 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 F8VZ95 297 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 MAFGO15525 162 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 KIF4AO95239 1232 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 FTCDO95954 541 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 PLS3P13797 630 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 RARRES1P49788 294 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 MTMR1Q13613 665 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 CDAN1Q8IWY9 1227 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 LRRC57Q8N9N7 239 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 USP38Q8NB14 1042 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 ACTRT1Q8TDG2 376 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 TEPSINQ96N21 525 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 INTS2Q9H0H0 1204 aaKnown RBP11.37□□□□□ -0.59
PABPC1-224ENST00000610907 POLD4Q9HCU8 107 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 GDF3Q9NR23 364 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 RBM12Q9NTZ6 932 aaKnown RBP11.37□□□□□ -0.59
PABPC1-224ENST00000610907 ANKEF1Q9NU02 776 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 COL20A1Q9P218 1284 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 SUCLA2Q9P2R7 463 aaPredicted RBP11.37□□□□□ -0.59
PABPC1-224ENST00000610907 APEX2Q9UBZ4 518 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 TMEM59LQ9UK28 342 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 DNAJC12Q9UKB3 198 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 PPP1R9AQ9ULJ8 1098 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 USP20Q9Y2K6 914 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 DIS3Q9Y2L1 958 aaKnown RBP11.37□□□□□ -0.59
PABPC1-224ENST00000610907 FAN1Q9Y2M0 1017 aa11.37□□□□□ -0.59
PABPC1-224ENST00000610907 CTDP1Q9Y5B0 961 aaPredicted RBP11.37□□□□□ -0.59
PABPC1-224ENST00000610907 ZC3H4Q9UPT8 1303 aaKnown RBP11.37□□□□□ -0.59
PABPC1-224ENST00000610907 K7ENM7 598 aa11.36□□□□□ -0.59
PABPC1-224ENST00000610907 DDX3XO00571 662 aaKnown RBP eCLIP11.36□□□□□ -0.59
PABPC1-224ENST00000610907 NFIBO00712 420 aa11.36□□□□□ -0.59
PABPC1-224ENST00000610907 EVI5O60447 810 aa11.36□□□□□ -0.59
PABPC1-224ENST00000610907 SYF2O95926 243 aaKnown RBP11.36□□□□□ -0.59
PABPC1-224ENST00000610907 TMEM253P0C7T8 217 aa11.36□□□□□ -0.59
PABPC1-224ENST00000610907 MYBL2P10244 700 aa11.36□□□□□ -0.59
PABPC1-224ENST00000610907 ALAS1P13196 640 aa11.36□□□□□ -0.59
PABPC1-224ENST00000610907 MATR3P43243 847 aaKnown RBP eCLIP11.36□□□□□ -0.59
PABPC1-224ENST00000610907 NOP2P46087 812 aaKnown RBP11.36□□□□□ -0.59
PABPC1-224ENST00000610907 CYP2J2P51589 502 aa11.36□□□□□ -0.59
PABPC1-224ENST00000610907 PSMC5P62195 406 aa11.36□□□□□ -0.59
PABPC1-224ENST00000610907 MRPS9P82933 396 aaKnown RBP11.36□□□□□ -0.59
PABPC1-224ENST00000610907 GTF2BQ00403 316 aa11.36□□□□□ -0.59
PABPC1-224ENST00000610907 MYL7Q01449 175 aa11.36□□□□□ -0.59
PABPC1-224ENST00000610907 KRT76Q01546 638 aa11.36□□□□□ -0.59
PABPC1-224ENST00000610907 ITGB3BPQ13352 177 aaPredicted RBP11.36□□□□□ -0.59
PABPC1-224ENST00000610907 DRAP1Q14919 205 aaPredicted RBP11.36□□□□□ -0.59
PABPC1-224ENST00000610907 ENOX2Q16206 610 aaKnown RBP11.36□□□□□ -0.59
PABPC1-224ENST00000610907 SLC30A10Q6XR72 485 aa11.36□□□□□ -0.59
PABPC1-224ENST00000610907 GPIHBP1Q8IV16 184 aa11.36□□□□□ -0.59
PABPC1-224ENST00000610907 TPCN2Q8NHX9 752 aa11.36□□□□□ -0.59
PABPC1-224ENST00000610907 HDAC7Q8WUI4 952 aa11.36□□□□□ -0.59
PABPC1-224ENST00000610907 HVCN1Q96D96 273 aa11.36□□□□□ -0.59
PABPC1-224ENST00000610907 PSMB7Q99436 277 aa11.36□□□□□ -0.59
PABPC1-224ENST00000610907 TCEAL9Q9UHQ7 104 aa11.36□□□□□ -0.59
PABPC1-224ENST00000610907 MYH11P35749 1972 aa11.36□□□□□ -0.59
PABPC1-224ENST00000610907 GOLGA6BA6NDN3 693 aa11.35□□□□□ -0.59
PABPC1-224ENST00000610907 CCDC188H7C350 402 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms