RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 CACNB1Q02641 598 aaPredicted RBP24.24■■□□□ 1.47
SHANK2-220ENST00000608988 GABPAQ06546 454 aa24.24■■□□□ 1.47
SHANK2-220ENST00000608988 AP3B2Q13367 1082 aa24.24■■□□□ 1.47
SHANK2-220ENST00000608988 SFR1Q86XK3 245 aa24.24■■□□□ 1.47
SHANK2-220ENST00000608988 LNX1Q8TBB1 728 aaPredicted RBP24.24■■□□□ 1.47
SHANK2-220ENST00000608988 SLC35G2Q8TBE7 412 aa24.24■■□□□ 1.47
SHANK2-220ENST00000608988 MKNK1Q9BUB5 465 aa24.24■■□□□ 1.47
SHANK2-220ENST00000608988 ZHX3Q9H4I2 956 aa24.24■■□□□ 1.47
SHANK2-220ENST00000608988 PODXLO00592 558 aa24.23■■□□□ 1.47
SHANK2-220ENST00000608988 RGS16O15492 202 aaPredicted RBP24.23■■□□□ 1.47
SHANK2-220ENST00000608988 ATP6V1G2O95670 118 aa24.23■■□□□ 1.47
SHANK2-220ENST00000608988 CHRM1P11229 460 aaPredicted RBP24.23■■□□□ 1.47
SHANK2-220ENST00000608988 CHRNA3P32297 505 aa24.23■■□□□ 1.47
SHANK2-220ENST00000608988 MAPK7Q13164 816 aa24.23■■□□□ 1.47
SHANK2-220ENST00000608988 CEP57Q86XR8 500 aa24.23■■□□□ 1.47
SHANK2-220ENST00000608988 OLIG1Q8TAK6 271 aa24.23■■□□□ 1.47
SHANK2-220ENST00000608988 SCLT1Q96NL6 688 aa24.23■■□□□ 1.47
SHANK2-220ENST00000608988 SYT11Q9BT88 431 aa24.23■■□□□ 1.47
SHANK2-220ENST00000608988 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.23■■□□□ 1.471e-6■■■■□ 22.3
SHANK2-220ENST00000608988 MTRF1LQ9UGC7 380 aaKnown RBP24.23■■□□□ 1.47
SHANK2-220ENST00000608988 NRAPQ86VF7 1730 aa24.23■■□□□ 1.47
SHANK2-220ENST00000608988 ASTN1O14525 1302 aa24.22■■□□□ 1.47
SHANK2-220ENST00000608988 SYNGAP1Q96PV0 1343 aa24.22■■□□□ 1.47
SHANK2-220ENST00000608988 KIAA0391O15091 583 aaKnown RBP24.22■■□□□ 1.47
SHANK2-220ENST00000608988 EIF3DO15371 548 aaKnown RBP eCLIP24.22■■□□□ 1.47
SHANK2-220ENST00000608988 IL1R1P14778 569 aa24.22■■□□□ 1.47
SHANK2-220ENST00000608988 TLDC1Q6P9B6 456 aa24.22■■□□□ 1.47
SHANK2-220ENST00000608988 JAMLQ86YT9 394 aa24.22■■□□□ 1.47
SHANK2-220ENST00000608988 RHOT2Q8IXI1 618 aa24.22■■□□□ 1.47
SHANK2-220ENST00000608988 LRRC47Q8N1G4 583 aaKnown RBP24.22■■□□□ 1.47
SHANK2-220ENST00000608988 CCDC63Q8NA47 563 aa24.22■■□□□ 1.47
SHANK2-220ENST00000608988 TBC1D22AQ8WUA7 517 aa24.22■■□□□ 1.47
SHANK2-220ENST00000608988 BORCS6Q96GS4 357 aa24.22■■□□□ 1.47
SHANK2-220ENST00000608988 TRPC6Q9Y210 931 aa24.22■■□□□ 1.47
SHANK2-220ENST00000608988 A0A1B0GUA9 196 aa24.21■■□□□ 1.47
SHANK2-220ENST00000608988 SPDYE3A6NKU9 549 aa24.21■■□□□ 1.47
SHANK2-220ENST00000608988 EVI5O60447 810 aa24.21■■□□□ 1.47
SHANK2-220ENST00000608988 PHF2O75151 1096 aa24.21■■□□□ 1.47
SHANK2-220ENST00000608988 RFX1P22670 979 aa24.21■■□□□ 1.47
SHANK2-220ENST00000608988 SLMAPQ14BN4 828 aa24.21■■□□□ 1.47
SHANK2-220ENST00000608988 TCERG1LQ5VWI1 586 aa24.21■■□□□ 1.47
SHANK2-220ENST00000608988 VTI1AQ96AJ9 217 aa24.21■■□□□ 1.47
SHANK2-220ENST00000608988 HOOK2Q96ED9 719 aa24.21■■□□□ 1.47
SHANK2-220ENST00000608988 REEP2Q9BRK0 252 aa24.21■■□□□ 1.47
SHANK2-220ENST00000608988 OLFML3Q9NRN5 406 aa24.21■■□□□ 1.47
SHANK2-220ENST00000608988 AJAP1Q9UKB5 411 aaPredicted RBP24.21■■□□□ 1.47
SHANK2-220ENST00000608988 PFASO15067 1338 aa24.21■■□□□ 1.47
SHANK2-220ENST00000608988 POTEFA5A3E0 1075 aa24.21■■□□□ 1.47
SHANK2-220ENST00000608988 POTEIP0CG38 1075 aa24.21■■□□□ 1.47
SHANK2-220ENST00000608988 Q4G0T1 1027 aa24.21■■□□□ 1.47
SHANK2-220ENST00000608988 DCAF12L1Q5VU92 463 aa24.21■■□□□ 1.47
SHANK2-220ENST00000608988 C11orf63Q6NUN7 778 aa24.21■■□□□ 1.47
SHANK2-220ENST00000608988 POTEGQ6S5H5 508 aa24.21■■□□□ 1.47
SHANK2-220ENST00000608988 POTEEQ6S8J3 1075 aa24.21■■□□□ 1.47
SHANK2-220ENST00000608988 ZDHHC24Q6UX98 284 aa24.21■■□□□ 1.47
SHANK2-220ENST00000608988 PROCA1Q8NCQ7 364 aaPredicted RBP24.21■■□□□ 1.47
SHANK2-220ENST00000608988 MDM1Q8TC05 714 aa24.21■■□□□ 1.47
SHANK2-220ENST00000608988 ADAM7Q9H2U9 754 aa24.21■■□□□ 1.47
SHANK2-220ENST00000608988 INTS9Q9NV88 658 aaKnown RBP24.21■■□□□ 1.47
SHANK2-220ENST00000608988 PCYOX1Q9UHG3 505 aa24.21■■□□□ 1.47
SHANK2-220ENST00000608988 PPP1R9AQ9ULJ8 1098 aa24.21■■□□□ 1.47
SHANK2-220ENST00000608988 UBE4BO95155 1302 aa24.2■■□□□ 1.47
SHANK2-220ENST00000608988 ANKRD62A6NC57 917 aa24.2■■□□□ 1.46
SHANK2-220ENST00000608988 RPS6KA4O75676 772 aa24.2■■□□□ 1.46
SHANK2-220ENST00000608988 PSMC2P35998 433 aaKnown RBP24.2■■□□□ 1.46
SHANK2-220ENST00000608988 SLC8A3P57103 927 aa24.2■■□□□ 1.46
SHANK2-220ENST00000608988 SPIRE1Q08AE8 756 aa24.2■■□□□ 1.46
SHANK2-220ENST00000608988 TNFAIP8L3Q5GJ75 292 aa24.2■■□□□ 1.46
SHANK2-220ENST00000608988 TAOK1Q7L7X3 1001 aa24.2■■□□□ 1.46
SHANK2-220ENST00000608988 CATSPER3Q86XQ3 398 aa24.2■■□□□ 1.46
SHANK2-220ENST00000608988 MIEF2Q96C03 454 aa24.2■■□□□ 1.46
SHANK2-220ENST00000608988 ANO3Q9BYT9 981 aa24.2■■□□□ 1.46
SHANK2-220ENST00000608988 NOD2Q9HC29 1040 aa24.2■■□□□ 1.46
SHANK2-220ENST00000608988 CD209Q9NNX6 404 aa24.2■■□□□ 1.46
SHANK2-220ENST00000608988 TBCAO75347 108 aaKnown RBP24.19■■□□□ 1.46
SHANK2-220ENST00000608988 SLC15A2Q16348 729 aa24.19■■□□□ 1.46
SHANK2-220ENST00000608988 MFSD5Q6N075 450 aa24.19■■□□□ 1.46
SHANK2-220ENST00000608988 ETNPPLQ8TBG4 499 aa24.19■■□□□ 1.46
SHANK2-220ENST00000608988 MORC4Q8TE76 937 aa24.19■■□□□ 1.46
SHANK2-220ENST00000608988 FAM20AQ96MK3 541 aa24.19■■□□□ 1.46
SHANK2-220ENST00000608988 SELENOSQ9BQE4 189 aa24.19■■□□□ 1.46
SHANK2-220ENST00000608988 PLCD4Q9BRC7 762 aa24.19■■□□□ 1.46
SHANK2-220ENST00000608988 ROPN1BQ9BZX4 212 aaPredicted RBP24.19■■□□□ 1.46
SHANK2-220ENST00000608988 TAOK3Q9H2K8 898 aa24.19■■□□□ 1.46
SHANK2-220ENST00000608988 ROPN1Q9HAT0 212 aaPredicted RBP24.19■■□□□ 1.46
SHANK2-220ENST00000608988 AFF2P51816 1311 aa24.19■■□□□ 1.46
SHANK2-220ENST00000608988 FRMPD4Q14CM0 1322 aa24.19■■□□□ 1.46
SHANK2-220ENST00000608988 AKR1B1P15121 316 aa24.19■■□□□ 1.46
SHANK2-220ENST00000608988 PSEN1P49768 467 aa24.19■■□□□ 1.46
SHANK2-220ENST00000608988 PTPROQ16827 1216 aa24.19■■□□□ 1.46
SHANK2-220ENST00000608988 TRPM8Q7Z2W7 1104 aa24.19■■□□□ 1.46
SHANK2-220ENST00000608988 UBL4BQ8N7F7 174 aa24.19■■□□□ 1.46
SHANK2-220ENST00000608988 GBP7Q8N8V2 638 aaPredicted RBP24.19■■□□□ 1.46
SHANK2-220ENST00000608988 GJA10Q969M2 543 aa24.19■■□□□ 1.46
SHANK2-220ENST00000608988 RNF25Q96BH1 459 aaPredicted RBP24.19■■□□□ 1.46
SHANK2-220ENST00000608988 SHBGP04278 402 aa24.18■■□□□ 1.46
SHANK2-220ENST00000608988 VCAM1P19320 739 aa24.18■■□□□ 1.46
SHANK2-220ENST00000608988 ATP2B4P23634 1241 aa24.18■■□□□ 1.46
SHANK2-220ENST00000608988 PTGIRP43119 386 aa24.18■■□□□ 1.46
SHANK2-220ENST00000608988 PPP1R7Q15435 360 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms