RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 MYL5Q02045 173 aa18.24■□□□□ 0.51
PMF1-206ENST00000606952 TBC1D8BQ0IIM8 1120 aa18.24■□□□□ 0.51
PMF1-206ENST00000606952 PAK1Q13153 545 aa18.24■□□□□ 0.51
PMF1-206ENST00000606952 MFSD10Q14728 455 aa18.24■□□□□ 0.51
PMF1-206ENST00000606952 ODR4Q5SWX8 454 aa18.24■□□□□ 0.51
PMF1-206ENST00000606952 LHX8Q68G74 356 aa18.24■□□□□ 0.51
PMF1-206ENST00000606952 CENPPQ6IPU0 288 aa18.24■□□□□ 0.51
PMF1-206ENST00000606952 ZNF720Q7Z2F6 126 aa18.24■□□□□ 0.51
PMF1-206ENST00000606952 MYOCDQ8IZQ8 938 aa18.24■□□□□ 0.51
PMF1-206ENST00000606952 MYCT1Q8N699 235 aa18.24■□□□□ 0.51
PMF1-206ENST00000606952 ZNF507Q8TCN5 953 aa18.24■□□□□ 0.51
PMF1-206ENST00000606952 SCFD1Q8WVM8 642 aa18.24■□□□□ 0.51
PMF1-206ENST00000606952 TCP11Q8WWU5 503 aa18.24■□□□□ 0.51
PMF1-206ENST00000606952 HPS3Q969F9 1004 aa18.24■□□□□ 0.51
PMF1-206ENST00000606952 GPRC5CQ9NQ84 441 aa18.24■□□□□ 0.51
PMF1-206ENST00000606952 NRCAMQ92823 1304 aa18.23■□□□□ 0.51
PMF1-206ENST00000606952 EVPLQ92817 2033 aa18.23■□□□□ 0.51
PMF1-206ENST00000606952 MBLAC1A4D2B0 266 aaPredicted RBP18.23■□□□□ 0.51
PMF1-206ENST00000606952 ABCD1P33897 745 aa18.23■□□□□ 0.51
PMF1-206ENST00000606952 CASP5P51878 434 aa18.23■□□□□ 0.51
PMF1-206ENST00000606952 LBX1P52954 281 aa18.23■□□□□ 0.51
PMF1-206ENST00000606952 ADAM17P78536 824 aa18.23■□□□□ 0.51
PMF1-206ENST00000606952 KIAA0753Q2KHM9 967 aa18.23■□□□□ 0.51
PMF1-206ENST00000606952 ZCWPW2Q504Y3 356 aa18.23■□□□□ 0.51
PMF1-206ENST00000606952 FAM102BQ5T8I3 360 aa18.23■□□□□ 0.51
PMF1-206ENST00000606952 IER5Q5VY09 327 aa18.23■□□□□ 0.51
PMF1-206ENST00000606952 FAM178BQ8IXR5 827 aa18.23■□□□□ 0.51
PMF1-206ENST00000606952 GLIS3Q8NEA6 775 aa18.23■□□□□ 0.51
PMF1-206ENST00000606952 HVCN1Q96D96 273 aa18.23■□□□□ 0.51
PMF1-206ENST00000606952 MTG1Q9BT17 334 aaPredicted RBP18.23■□□□□ 0.51
PMF1-206ENST00000606952 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.23■□□□□ 0.513e-7■■■■■ 42.1
PMF1-206ENST00000606952 POLR3FQ9H1D9 316 aaPredicted RBP18.23■□□□□ 0.51
PMF1-206ENST00000606952 SFI1A8K8P3 1242 aa18.22■□□□□ 0.51
PMF1-206ENST00000606952 PGK1P00558 417 aa18.22■□□□□ 0.51
PMF1-206ENST00000606952 MYL3P08590 195 aa18.22■□□□□ 0.51
PMF1-206ENST00000606952 NAMPTP43490 491 aa18.22■□□□□ 0.51
PMF1-206ENST00000606952 MRE11P49959 708 aa18.22■□□□□ 0.51
PMF1-206ENST00000606952 PPFIA1Q13136 1202 aa18.22■□□□□ 0.51
PMF1-206ENST00000606952 DMP1Q13316 513 aaPredicted RBP18.22■□□□□ 0.51
PMF1-206ENST00000606952 MKRN4PQ13434 485 aaPredicted RBP18.22■□□□□ 0.51
PMF1-206ENST00000606952 PPP2R5AQ15172 486 aa18.22■□□□□ 0.51
PMF1-206ENST00000606952 GRIK4Q16099 956 aa18.22■□□□□ 0.51
PMF1-206ENST00000606952 GNASQ5JWF2 1037 aa18.22■□□□□ 0.51
PMF1-206ENST00000606952 MARCH8Q5T0T0 291 aa18.22■□□□□ 0.51
PMF1-206ENST00000606952 TTI2Q6NXR4 508 aa18.22■□□□□ 0.51
PMF1-206ENST00000606952 STXBP4Q6ZWJ1 553 aa18.22■□□□□ 0.51
PMF1-206ENST00000606952 TRMT1LQ7Z2T5 733 aaKnown RBP18.22■□□□□ 0.51
PMF1-206ENST00000606952 CTU1Q7Z7A3 348 aaKnown RBP18.22■□□□□ 0.51
PMF1-206ENST00000606952 LUZP1Q86V48 1076 aa18.22■□□□□ 0.51
PMF1-206ENST00000606952 AOPEPQ8N6M6 819 aa18.22■□□□□ 0.51
PMF1-206ENST00000606952 PCSK9Q8NBP7 692 aaKnown RBP18.22■□□□□ 0.51
PMF1-206ENST00000606952 NELFBQ8WX92 580 aa18.22■□□□□ 0.51
PMF1-206ENST00000606952 BSNDQ8WZ55 320 aa18.22■□□□□ 0.51
PMF1-206ENST00000606952 P2RX5Q93086 422 aa18.22■□□□□ 0.51
PMF1-206ENST00000606952 TSEN34Q9BSV6 310 aaKnown RBP18.22■□□□□ 0.51
PMF1-206ENST00000606952 HSD3B7Q9H2F3 369 aa18.22■□□□□ 0.51
PMF1-206ENST00000606952 KCTD10Q9H3F6 313 aa18.22■□□□□ 0.51
PMF1-206ENST00000606952 MRPL44Q9H9J2 332 aaKnown RBP18.22■□□□□ 0.51
PMF1-206ENST00000606952 GRPEL1Q9HAV7 217 aa18.22■□□□□ 0.51
PMF1-206ENST00000606952 PAK6Q9NQU5 681 aaPredicted RBP18.22■□□□□ 0.51
PMF1-206ENST00000606952 ARHGAP28Q9P2N2 729 aa18.22■□□□□ 0.51
PMF1-206ENST00000606952 HTTP42858 3142 aa18.21■□□□□ 0.51
PMF1-206ENST00000606952 ZMYM2Q9UBW7 1377 aa18.21■□□□□ 0.51
PMF1-206ENST00000606952 BICDL2A1A5D9 508 aa18.21■□□□□ 0.51
PMF1-206ENST00000606952 H0YCG3 227 aa18.21■□□□□ 0.51
PMF1-206ENST00000606952 CABYRO75952 493 aa18.21■□□□□ 0.51
PMF1-206ENST00000606952 SMIM10L2AP0DMW4 78 aa18.21■□□□□ 0.51
PMF1-206ENST00000606952 SMIM10L2BP0DMW5 78 aa18.21■□□□□ 0.51
PMF1-206ENST00000606952 GLRA2P23416 452 aa18.21■□□□□ 0.51
PMF1-206ENST00000606952 GTF2BQ00403 316 aa18.21■□□□□ 0.51
PMF1-206ENST00000606952 LRRC63Q05C16 580 aa18.21■□□□□ 0.51
PMF1-206ENST00000606952 PKN2Q16513 984 aaKnown RBP18.21■□□□□ 0.51
PMF1-206ENST00000606952 SPATA1Q5VX52 437 aa18.21■□□□□ 0.51
PMF1-206ENST00000606952 MTHFD1LQ6UB35 978 aa18.21■□□□□ 0.51
PMF1-206ENST00000606952 PPP4R3CPQ6ZMV5 832 aa18.21■□□□□ 0.51
PMF1-206ENST00000606952 RNF180Q86T96 592 aa18.21■□□□□ 0.51
PMF1-206ENST00000606952 SESTD1Q86VW0 696 aa18.21■□□□□ 0.51
PMF1-206ENST00000606952 ZC3H3Q8IXZ2 948 aaKnown RBP18.21■□□□□ 0.51
PMF1-206ENST00000606952 RETREG2Q8NC44 543 aa18.21■□□□□ 0.51
PMF1-206ENST00000606952 RNF214Q8ND24 703 aa18.21■□□□□ 0.51
PMF1-206ENST00000606952 TMEM174Q8WUU8 243 aa18.21■□□□□ 0.51
PMF1-206ENST00000606952 ZHX3Q9H4I2 956 aa18.21■□□□□ 0.51
PMF1-206ENST00000606952 CTNND2Q9UQB3 1225 aa18.21■□□□□ 0.51
PMF1-206ENST00000606952 PCDHB13Q9Y5F0 798 aa18.21■□□□□ 0.51
PMF1-206ENST00000606952 MOXD2PA6NHM9 499 aa18.2■□□□□ 0.5
PMF1-206ENST00000606952 GCNT3O95395 438 aa18.2■□□□□ 0.5
PMF1-206ENST00000606952 MYBP10242 640 aa18.2■□□□□ 0.5
PMF1-206ENST00000606952 ZNF18P17022 549 aa18.2■□□□□ 0.5
PMF1-206ENST00000606952 NMT1P30419 496 aaKnown RBP18.2■□□□□ 0.5
PMF1-206ENST00000606952 HOXD13P35453 343 aa18.2■□□□□ 0.5
PMF1-206ENST00000606952 NPTX2P47972 431 aa18.2■□□□□ 0.5
PMF1-206ENST00000606952 SMTNP53814 917 aa18.2■□□□□ 0.5
PMF1-206ENST00000606952 PEX3P56589 373 aa18.2■□□□□ 0.5
PMF1-206ENST00000606952 POU5F1BQ06416 359 aa18.2■□□□□ 0.5
PMF1-206ENST00000606952 MXD4Q14582 209 aaPredicted RBP18.2■□□□□ 0.5
PMF1-206ENST00000606952 LRRC41Q15345 812 aa18.2■□□□□ 0.5
PMF1-206ENST00000606952 NFIL3Q16649 462 aa18.2■□□□□ 0.5
PMF1-206ENST00000606952 KLHL10Q6JEL2 608 aa18.2■□□□□ 0.5
PMF1-206ENST00000606952 FBXO46Q6PJ61 603 aaPredicted RBP18.2■□□□□ 0.5
PMF1-206ENST00000606952 MAEAQ7L5Y9 396 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms