RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 HAUS6Q7Z4H7 955 aa23.73■■□□□ 1.39
USP6NL-204ENST00000606752 TC2NQ8N9U0 490 aa23.73■■□□□ 1.39
USP6NL-204ENST00000606752 GOLGA5Q8TBA6 731 aa23.73■■□□□ 1.39
USP6NL-204ENST00000606752 ABHD16BQ9H3Z7 469 aa23.73■■□□□ 1.39
USP6NL-204ENST00000606752 DHX33Q9H6R0 707 aaKnown RBP23.73■■□□□ 1.39
USP6NL-204ENST00000606752 MYH11P35749 1972 aa23.73■■□□□ 1.39
USP6NL-204ENST00000606752 AKR1B15C9JRZ8 316 aaPredicted RBP23.73■■□□□ 1.39
USP6NL-204ENST00000606752 NPTX2P47972 431 aa23.73■■□□□ 1.39
USP6NL-204ENST00000606752 POLGP54098 1239 aaPredicted RBP23.73■■□□□ 1.39
USP6NL-204ENST00000606752 ARHGAP1Q07960 439 aa23.73■■□□□ 1.39
USP6NL-204ENST00000606752 TARBP2Q15633 366 aaKnown RBP23.73■■□□□ 1.39
USP6NL-204ENST00000606752 CEP135Q66GS9 1140 aa23.73■■□□□ 1.39
USP6NL-204ENST00000606752 SYCP3Q8IZU3 236 aa23.73■■□□□ 1.39
USP6NL-204ENST00000606752 CCDC112Q8NEF3 446 aa23.73■■□□□ 1.39
USP6NL-204ENST00000606752 SPIRE2Q8WWL2 714 aa23.73■■□□□ 1.39
USP6NL-204ENST00000606752 ACCSQ96QU6 501 aa23.73■■□□□ 1.39
USP6NL-204ENST00000606752 CEP89Q96ST8 783 aa23.73■■□□□ 1.39
USP6NL-204ENST00000606752 TMX1Q9H3N1 280 aa23.73■■□□□ 1.39
USP6NL-204ENST00000606752 PPME1Q9Y570 386 aa23.73■■□□□ 1.39
USP6NL-204ENST00000606752 CCDC169A6NNP5 214 aa23.72■■□□□ 1.39
USP6NL-204ENST00000606752 CLIC2O15247 247 aa23.72■■□□□ 1.39
USP6NL-204ENST00000606752 SLC16A4O15374 487 aa23.72■■□□□ 1.39
USP6NL-204ENST00000606752 GH1P01241 217 aa23.72■■□□□ 1.39
USP6NL-204ENST00000606752 TPM1P09493 284 aa23.72■■□□□ 1.39
USP6NL-204ENST00000606752 RFC5P40937 340 aa23.72■■□□□ 1.39
USP6NL-204ENST00000606752 ADKP55263 362 aaKnown RBP23.72■■□□□ 1.39
USP6NL-204ENST00000606752 EMC2Q15006 297 aa23.72■■□□□ 1.39
USP6NL-204ENST00000606752 FRMD5Q7Z6J6 570 aa23.72■■□□□ 1.39
USP6NL-204ENST00000606752 TRIM59Q8IWR1 403 aa23.72■■□□□ 1.39
USP6NL-204ENST00000606752 BBXQ8WY36 941 aaPredicted RBP23.72■■□□□ 1.39
USP6NL-204ENST00000606752 ERGIC2Q96RQ1 377 aa23.72■■□□□ 1.39
USP6NL-204ENST00000606752 KCNG1Q9UIX4 513 aa23.72■■□□□ 1.39
USP6NL-204ENST00000606752 EMSYQ7Z589 1322 aa23.72■■□□□ 1.39
USP6NL-204ENST00000606752 ADCYAP1R1P41586 468 aa23.71■■□□□ 1.39
USP6NL-204ENST00000606752 SLC26A2P50443 739 aa23.71■■□□□ 1.39
USP6NL-204ENST00000606752 SOX10P56693 466 aa23.71■■□□□ 1.39
USP6NL-204ENST00000606752 GOLGA8FQ08AF8 430 aa23.71■■□□□ 1.39
USP6NL-204ENST00000606752 GOLGA8DPQ0D2H9 430 aa23.71■■□□□ 1.39
USP6NL-204ENST00000606752 CRHR2Q13324 411 aa23.71■■□□□ 1.39
USP6NL-204ENST00000606752 ACVR2BQ13705 512 aa23.71■■□□□ 1.39
USP6NL-204ENST00000606752 SLC7A3Q8WY07 619 aa23.71■■□□□ 1.39
USP6NL-204ENST00000606752 SMARCAD1Q9H4L7 1026 aa23.71■■□□□ 1.39
USP6NL-204ENST00000606752 AGPAT3Q9NRZ7 376 aa23.71■■□□□ 1.39
USP6NL-204ENST00000606752 SLC16A3O15427 465 aaKnown RBP23.7■■□□□ 1.39
USP6NL-204ENST00000606752 GYPCP04921 128 aa23.7■■□□□ 1.39
USP6NL-204ENST00000606752 HOXC6P09630 235 aa23.7■■□□□ 1.39
USP6NL-204ENST00000606752 TMEM161BQ8NDZ6 487 aa23.7■■□□□ 1.39
USP6NL-204ENST00000606752 CPLX3Q8WVH0 158 aa23.7■■□□□ 1.39
USP6NL-204ENST00000606752 EMID1Q96A84 441 aaPredicted RBP23.7■■□□□ 1.39
USP6NL-204ENST00000606752 IFT74Q96LB3 600 aa23.7■■□□□ 1.39
USP6NL-204ENST00000606752 ZIC5Q96T25 663 aa23.7■■□□□ 1.39
USP6NL-204ENST00000606752 IKZF4Q9H2S9 585 aa23.7■■□□□ 1.39
USP6NL-204ENST00000606752 KMT5AQ9NQR1 393 aa23.7■■□□□ 1.39
USP6NL-204ENST00000606752 AKAP3O75969 853 aa23.7■■□□□ 1.38
USP6NL-204ENST00000606752 CLCN1P35523 988 aa23.7■■□□□ 1.38
USP6NL-204ENST00000606752 MYBPC2Q14324 1141 aa23.7■■□□□ 1.38
USP6NL-204ENST00000606752 PAXIP1Q6ZW49 1069 aaPredicted RBP23.7■■□□□ 1.38
USP6NL-204ENST00000606752 ATP8B4Q8TF62 1192 aa23.7■■□□□ 1.38
USP6NL-204ENST00000606752 BSNDQ8WZ55 320 aa23.7■■□□□ 1.38
USP6NL-204ENST00000606752 HVCN1Q96D96 273 aa23.7■■□□□ 1.38
USP6NL-204ENST00000606752 POLR3FQ9H1D9 316 aaPredicted RBP23.7■■□□□ 1.38
USP6NL-204ENST00000606752 METTL14Q9HCE5 456 aaKnown RBP23.7■■□□□ 1.38
USP6NL-204ENST00000606752 DMAC2Q9NW81 257 aa23.7■■□□□ 1.38
USP6NL-204ENST00000606752 CGNQ9P2M7 1197 aaKnown RBP23.7■■□□□ 1.38
USP6NL-204ENST00000606752 ARMCX3Q9UH62 379 aaPredicted RBP23.7■■□□□ 1.38
USP6NL-204ENST00000606752 FAM184BQ9ULE4 1060 aa23.7■■□□□ 1.38
USP6NL-204ENST00000606752 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.7■■□□□ 1.38
USP6NL-204ENST00000606752 ZNF236Q9UL36 1845 aa23.69■■□□□ 1.38
USP6NL-204ENST00000606752 CA12O43570 354 aa23.69■■□□□ 1.38
USP6NL-204ENST00000606752 ECM2O94769 699 aaPredicted RBP23.69■■□□□ 1.38
USP6NL-204ENST00000606752 EPB41P11171 864 aaKnown RBP23.69■■□□□ 1.38
USP6NL-204ENST00000606752 CASP14P31944 242 aa23.69■■□□□ 1.38
USP6NL-204ENST00000606752 SYCP1Q15431 976 aa23.69■■□□□ 1.38
USP6NL-204ENST00000606752 GJC2Q5T442 439 aaPredicted RBP23.69■■□□□ 1.38
USP6NL-204ENST00000606752 IQSEC1Q6DN90 963 aa23.69■■□□□ 1.38
USP6NL-204ENST00000606752 TRIM50Q86XT4 487 aa23.69■■□□□ 1.38
USP6NL-204ENST00000606752 CNGA4Q8IV77 575 aa23.69■■□□□ 1.38
USP6NL-204ENST00000606752 SLC9A9Q8IVB4 645 aa23.69■■□□□ 1.38
USP6NL-204ENST00000606752 PPTC7Q8NI37 304 aa23.69■■□□□ 1.38
USP6NL-204ENST00000606752 USP6NLQ92738 828 aa23.69■■□□□ 1.38
USP6NL-204ENST00000606752 PANX2Q96RD6 677 aa23.69■■□□□ 1.38
USP6NL-204ENST00000606752 NUP58Q9BVL2 599 aa23.69■■□□□ 1.38
USP6NL-204ENST00000606752 MARK3P27448 753 aa23.68■■□□□ 1.38
USP6NL-204ENST00000606752 FXR1P51114 621 aaKnown RBP eCLIP23.68■■□□□ 1.38
USP6NL-204ENST00000606752 SNRPFP62306 86 aaKnown RBP23.68■■□□□ 1.38
USP6NL-204ENST00000606752 GRM1Q13255 1194 aa23.68■■□□□ 1.38
USP6NL-204ENST00000606752 CYP4F22Q6NT55 531 aa23.68■■□□□ 1.38
USP6NL-204ENST00000606752 RETREG2Q8NC44 543 aa23.68■■□□□ 1.38
USP6NL-204ENST00000606752 TMEM174Q8WUU8 243 aa23.68■■□□□ 1.38
USP6NL-204ENST00000606752 MFAP3LO75121 409 aa23.68■■□□□ 1.38
USP6NL-204ENST00000606752 PSMC2P35998 433 aaKnown RBP23.68■■□□□ 1.38
USP6NL-204ENST00000606752 IRF5Q13568 498 aa23.68■■□□□ 1.38
USP6NL-204ENST00000606752 NOLC1Q14978 699 aaKnown RBP eCLIP23.68■■□□□ 1.38
USP6NL-204ENST00000606752 PLCB4Q15147 1175 aa23.68■■□□□ 1.38
USP6NL-204ENST00000606752 DUSP28Q4G0W2 176 aa23.68■■□□□ 1.38
USP6NL-204ENST00000606752 EXOC8Q8IYI6 725 aa23.68■■□□□ 1.38
USP6NL-204ENST00000606752 CCDC51Q96ER9 411 aa23.68■■□□□ 1.38
USP6NL-204ENST00000606752 MKNK1Q9BUB5 465 aa23.68■■□□□ 1.38
USP6NL-204ENST00000606752 ZHX1Q9UKY1 873 aaPredicted RBP23.68■■□□□ 1.38
USP6NL-204ENST00000606752 TBX20Q9UMR3 447 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms