RNA–Protein interactions for RNA: ENST00000605086.5

FOCAD-216, Transcript of focadhesin, humanhuman

TSL 1 (best) BASIC

Gene FOCAD, Length 4,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-216ENST00000605086 AGAP11Q8TF27 550 aa7.73□□□□□ -1.17
FOCAD-216ENST00000605086 CELF1Q92879 486 aaKnown RBP7.73□□□□□ -1.17
FOCAD-216ENST00000605086 NEUROG2Q9H2A3 272 aa7.73□□□□□ -1.17
FOCAD-216ENST00000605086 OSGEPQ9NPF4 335 aa7.73□□□□□ -1.17
FOCAD-216ENST00000605086 ABCF3Q9NUQ8 709 aa7.73□□□□□ -1.17
FOCAD-216ENST00000605086 POC1B-GALNT4F8VUJ3 575 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 ASAP2O43150 1006 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 UAP1Q16222 522 aaPredicted RBP7.72□□□□□ -1.17
FOCAD-216ENST00000605086 TPTE2Q6XPS3 522 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 FRMD5Q7Z6J6 570 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 ANKRD35Q8N283 1001 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 LRRC8CQ8TDW0 803 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 SCFD2Q8WU76 684 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 PIK3R5Q8WYR1 880 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 ZBTB10Q96DT7 871 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 CEP95Q96GE4 821 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 PNMA5Q96PV4 448 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 NUDT12Q9BQG2 462 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 TRIM4Q9C037 500 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 SEMA4AQ9H3S1 761 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.72□□□□□ -1.17
FOCAD-216ENST00000605086 SPATA31A3Q5VYP0 1347 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 MIF4GDA9UHW6 222 aaKnown RBP7.72□□□□□ -1.17
FOCAD-216ENST00000605086 CYTH3O43739 400 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 SHBGP04278 402 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 HLA-DOAP06340 250 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 STAT3P40763 770 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 MSH2P43246 934 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 KCNJ1P48048 391 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 FXR2P51116 673 aaKnown RBP eCLIP7.72□□□□□ -1.17
FOCAD-216ENST00000605086 MYL7Q01449 175 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 DPP8Q6V1X1 898 aaPredicted RBP7.72□□□□□ -1.17
FOCAD-216ENST00000605086 PPP1R21Q6ZMI0 780 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 RHOT2Q8IXI1 618 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 FAM178BQ8IXR5 827 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 SLFN12Q8IYM2 578 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 CCT6BQ92526 530 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 PRCCQ92733 491 aaPredicted RBP7.72□□□□□ -1.17
FOCAD-216ENST00000605086 RPGRQ92834 1020 aaKnown RBP7.72□□□□□ -1.17
FOCAD-216ENST00000605086 NUDCD1Q96RS6 583 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 BHMT2Q9H2M3 363 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 VPS37BQ9H9H4 285 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 SLC12A6Q9UHW9 1150 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 SLIT3O75094 1523 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 ALDH5A1P51649 535 aaPredicted RBP7.72□□□□□ -1.17
FOCAD-216ENST00000605086 USH1GQ495M9 461 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 ASPRV1Q53RT3 343 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 CCDC174Q6PII3 467 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 GBP5Q96PP8 586 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 NYXQ9GZU5 481 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 TYW1Q9NV66 732 aaKnown RBP7.72□□□□□ -1.17
FOCAD-216ENST00000605086 ANAPC5Q9UJX4 755 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 PCDHA1Q9Y5I3 950 aa7.72□□□□□ -1.17
FOCAD-216ENST00000605086 WTIPA6NIX2 430 aaPredicted RBP7.71□□□□□ -1.17
FOCAD-216ENST00000605086 hCG_1984214I3L0E3 225 aa7.71□□□□□ -1.17
FOCAD-216ENST00000605086 CES2O00748 559 aa7.71□□□□□ -1.17
FOCAD-216ENST00000605086 KIF3CO14782 793 aa7.71□□□□□ -1.17
FOCAD-216ENST00000605086 MAPK13O15264 365 aa7.71□□□□□ -1.17
FOCAD-216ENST00000605086 KRT5P13647 590 aa7.71□□□□□ -1.17
FOCAD-216ENST00000605086 PSEN1P49768 467 aa7.71□□□□□ -1.17
FOCAD-216ENST00000605086 KCNJ2P63252 427 aa7.71□□□□□ -1.17
FOCAD-216ENST00000605086 MAPK7Q13164 816 aa7.71□□□□□ -1.17
FOCAD-216ENST00000605086 ZNF746Q6NUN9 644 aaPredicted RBP7.71□□□□□ -1.17
FOCAD-216ENST00000605086 C6orf89Q6UWU4 347 aa7.71□□□□□ -1.17
FOCAD-216ENST00000605086 KCNK18Q7Z418 384 aa7.71□□□□□ -1.17
FOCAD-216ENST00000605086 COL23A1Q86Y22 540 aaPredicted RBP7.71□□□□□ -1.17
FOCAD-216ENST00000605086 PPM1KQ8N3J5 372 aa7.71□□□□□ -1.17
FOCAD-216ENST00000605086 ZNF713Q8N859 430 aaPredicted RBP7.71□□□□□ -1.17
FOCAD-216ENST00000605086 LRRC37BQ96QE4 947 aa7.71□□□□□ -1.17
FOCAD-216ENST00000605086 PAGR1Q9BTK6 254 aa7.71□□□□□ -1.17
FOCAD-216ENST00000605086 GLT8D2Q9H1C3 349 aa7.71□□□□□ -1.17
FOCAD-216ENST00000605086 CARD9Q9H257 536 aa7.71□□□□□ -1.17
FOCAD-216ENST00000605086 UBE2TQ9NPD8 197 aaPredicted RBP7.71□□□□□ -1.17
FOCAD-216ENST00000605086 IL17RBQ9NRM6 502 aa7.71□□□□□ -1.17
FOCAD-216ENST00000605086 RABGAP1Q9Y3P9 1069 aa7.71□□□□□ -1.17
FOCAD-216ENST00000605086 IKBKGQ9Y6K9 419 aa7.71□□□□□ -1.17
FOCAD-216ENST00000605086 PALM3A6NDB9 673 aaPredicted RBP7.71□□□□□ -1.18
FOCAD-216ENST00000605086 USP17L15C9J2P7 530 aa7.71□□□□□ -1.18
FOCAD-216ENST00000605086 USP17L13C9JLJ4 530 aa7.71□□□□□ -1.18
FOCAD-216ENST00000605086 USP17L11C9JVI0 530 aa7.71□□□□□ -1.18
FOCAD-216ENST00000605086 USP17L18D6R9N7 530 aa7.71□□□□□ -1.18
FOCAD-216ENST00000605086 USP17L22D6RA61 530 aa7.71□□□□□ -1.18
FOCAD-216ENST00000605086 USP17L17D6RBQ6 530 aa7.71□□□□□ -1.18
FOCAD-216ENST00000605086 USP17L19D6RCP7 530 aa7.71□□□□□ -1.18
FOCAD-216ENST00000605086 USP17L20D6RJB6 530 aa7.71□□□□□ -1.18
FOCAD-216ENST00000605086 PON1P27169 355 aa7.71□□□□□ -1.18
FOCAD-216ENST00000605086 SOX5P35711 763 aa7.71□□□□□ -1.18
FOCAD-216ENST00000605086 MMP14P50281 582 aa7.71□□□□□ -1.18
FOCAD-216ENST00000605086 USP17L24Q0WX57 530 aa7.71□□□□□ -1.18
FOCAD-216ENST00000605086 NKX1-1Q15270 411 aaPredicted RBP7.71□□□□□ -1.18
FOCAD-216ENST00000605086 EDRF1Q3B7T1 1238 aa7.71□□□□□ -1.18
FOCAD-216ENST00000605086 LACTB2Q53H82 288 aaPredicted RBP7.71□□□□□ -1.18
FOCAD-216ENST00000605086 WLSQ5T9L3 541 aa7.71□□□□□ -1.18
FOCAD-216ENST00000605086 ANKRD20A3Q5VUR7 823 aa7.71□□□□□ -1.18
FOCAD-216ENST00000605086 USP17L6PQ6QN14 398 aa7.71□□□□□ -1.18
FOCAD-216ENST00000605086 KCTD1Q719H9 257 aa7.71□□□□□ -1.18
FOCAD-216ENST00000605086 C18orf8Q96DM3 657 aa7.71□□□□□ -1.18
FOCAD-216ENST00000605086 MXD3Q9BW11 206 aa7.71□□□□□ -1.18
FOCAD-216ENST00000605086 DHX36Q9H2U1 1008 aaKnown RBP7.71□□□□□ -1.18
FOCAD-216ENST00000605086 TMEM94Q12767 1356 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms