RNA–Protein interactions for RNA: ENST00000604740.5

LAMA4-222, Transcript of laminin subunit alpha 4, human

TSL 2

Gene LAMA4, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMA4-222	ENST00000604740	INHBE	P58166	350 aa		5.71	□□□□□ -1.5
LAMA4-222	ENST00000604740	SLC6A3	Q01959	620 aa		5.71	□□□□□ -1.5
LAMA4-222	ENST00000604740	ROM1	Q03395	351 aa		5.71	□□□□□ -1.5
LAMA4-222	ENST00000604740	OTOP1	Q7RTM1	612 aa		5.71	□□□□□ -1.5
LAMA4-222	ENST00000604740	ANKRD35	Q8N283	1001 aa		5.71	□□□□□ -1.5
LAMA4-222	ENST00000604740	OR5AN1	Q8NGI8	311 aa		5.71	□□□□□ -1.5
LAMA4-222	ENST00000604740	THAP3	Q8WTV1	239 aa	Predicted RBP	5.71	□□□□□ -1.5
LAMA4-222	ENST00000604740	GFM2	Q969S9	779 aa	Known RBP	5.71	□□□□□ -1.5
LAMA4-222	ENST00000604740	E2F7	Q96AV8	911 aa		5.71	□□□□□ -1.5
LAMA4-222	ENST00000604740	RPL10L	Q96L21	214 aa	Known RBP	5.71	□□□□□ -1.5
LAMA4-222	ENST00000604740	SLC6A15	Q9H2J7	730 aa		5.71	□□□□□ -1.5
LAMA4-222	ENST00000604740	TRIM39	Q9HCM9	518 aa		5.71	□□□□□ -1.5
LAMA4-222	ENST00000604740	DENND2A	Q9ULE3	1009 aa		5.71	□□□□□ -1.5
LAMA4-222	ENST00000604740	PTCH2	Q9Y6C5	1203 aa		5.71	□□□□□ -1.5
LAMA4-222	ENST00000604740		M0R2C6	588 aa		5.7	□□□□□ -1.5
LAMA4-222	ENST00000604740	KCNQ2	O43526	872 aa		5.7	□□□□□ -1.5
LAMA4-222	ENST00000604740	FNTB	P49356	437 aa		5.7	□□□□□ -1.5
LAMA4-222	ENST00000604740	ADCY7	P51828	1080 aa		5.7	□□□□□ -1.5
LAMA4-222	ENST00000604740	BPIFB4	P59827	614 aa		5.7	□□□□□ -1.5
LAMA4-222	ENST00000604740	C2orf27A	Q580R0	203 aa		5.7	□□□□□ -1.5
LAMA4-222	ENST00000604740	DDX53	Q86TM3	631 aa	Known RBP	5.7	□□□□□ -1.5
LAMA4-222	ENST00000604740	ANKRD53	Q8N9V6	530 aa		5.7	□□□□□ -1.5
LAMA4-222	ENST00000604740	LARP4B	Q92615	738 aa	Known RBP	5.7	□□□□□ -1.5
LAMA4-222	ENST00000604740	CLIP3	Q96DZ5	547 aa		5.7	□□□□□ -1.5
LAMA4-222	ENST00000604740	C8orf37	Q96NL8	207 aa		5.7	□□□□□ -1.5
LAMA4-222	ENST00000604740	PCIF1	Q9H4Z3	704 aa		5.7	□□□□□ -1.5
LAMA4-222	ENST00000604740	NCOA5	Q9HCD5	579 aa	Known RBP	5.7	□□□□□ -1.5
LAMA4-222	ENST00000604740	SLC2A4RG	Q9NR83	387 aa		5.7	□□□□□ -1.5
LAMA4-222	ENST00000604740	UBA6	A0AVT1	1052 aa	Predicted RBP	5.69	□□□□□ -1.5
LAMA4-222	ENST00000604740	GOLGA8B	A8MQT2	603 aa		5.69	□□□□□ -1.5
LAMA4-222	ENST00000604740	ANTXR2	P58335	489 aa		5.69	□□□□□ -1.5
LAMA4-222	ENST00000604740	PURA	Q00577	322 aa	Known RBP	5.69	□□□□□ -1.5
LAMA4-222	ENST00000604740	RBL2	Q08999	1139 aa		5.69	□□□□□ -1.5
LAMA4-222	ENST00000604740	TCIRG1	Q13488	830 aa		5.69	□□□□□ -1.5
LAMA4-222	ENST00000604740	CNGB1	Q14028	1251 aa	Predicted RBP	5.69	□□□□□ -1.5
LAMA4-222	ENST00000604740	DGKD	Q16760	1214 aa		5.69	□□□□□ -1.5
LAMA4-222	ENST00000604740	ARHGAP44	Q17R89	818 aa		5.69	□□□□□ -1.5
LAMA4-222	ENST00000604740	SLFN12L	Q6IEE8	588 aa		5.69	□□□□□ -1.5
LAMA4-222	ENST00000604740		Q6ZRM9	215 aa		5.69	□□□□□ -1.5
LAMA4-222	ENST00000604740	GAREM2	Q75VX8	874 aa		5.69	□□□□□ -1.5
LAMA4-222	ENST00000604740	JMY	Q8N9B5	988 aa		5.69	□□□□□ -1.5
LAMA4-222	ENST00000604740	PMFBP1	Q8TBY8	1022 aa		5.69	□□□□□ -1.5
LAMA4-222	ENST00000604740	GPHA2	Q96T91	129 aa		5.69	□□□□□ -1.5
LAMA4-222	ENST00000604740	SAMD15	Q9P1V8	674 aa		5.69	□□□□□ -1.5
LAMA4-222	ENST00000604740	C2orf78	A6NCI8	922 aa		5.68	□□□□□ -1.5
LAMA4-222	ENST00000604740	GLRX3	O76003	335 aa	Known RBP	5.68	□□□□□ -1.5
LAMA4-222	ENST00000604740	SCNN1G	P51170	649 aa		5.68	□□□□□ -1.5
LAMA4-222	ENST00000604740	MECP2	P51608	486 aa	Known RBP	5.68	□□□□□ -1.5
LAMA4-222	ENST00000604740	ELAVL1	Q15717	326 aa	Known RBP	5.68	□□□□□ -1.5
LAMA4-222	ENST00000604740	PRAMEF9	Q5VWM5	478 aa		5.68	□□□□□ -1.5
LAMA4-222	ENST00000604740	ZCCHC8	Q6NZY4	707 aa	Known RBP	5.68	□□□□□ -1.5
LAMA4-222	ENST00000604740	LDLRAD3	Q86YD5	345 aa		5.68	□□□□□ -1.5
LAMA4-222	ENST00000604740	CHST14	Q8NCH0	376 aa		5.68	□□□□□ -1.5
LAMA4-222	ENST00000604740	MKL1	Q969V6	931 aa		5.68	□□□□□ -1.5
LAMA4-222	ENST00000604740	MIEF2	Q96C03	454 aa		5.68	□□□□□ -1.5
LAMA4-222	ENST00000604740	MAML3	Q96JK9	1138 aa		5.68	□□□□□ -1.5
LAMA4-222	ENST00000604740	KRTAP9-8	Q9BYQ0	159 aa		5.68	□□□□□ -1.5
LAMA4-222	ENST00000604740	RB1CC1	Q8TDY2	1594 aa		5.67	□□□□□ -1.5
LAMA4-222	ENST00000604740	UBE2QL1	A1L167	161 aa		5.67	□□□□□ -1.5
LAMA4-222	ENST00000604740		B4E1Z4	1266 aa		5.67	□□□□□ -1.5
LAMA4-222	ENST00000604740	DVL2	O14641	736 aa		5.67	□□□□□ -1.5
LAMA4-222	ENST00000604740	PLD2	O14939	933 aa		5.67	□□□□□ -1.5
LAMA4-222	ENST00000604740	RAPGEF3	O95398	923 aa		5.67	□□□□□ -1.5
LAMA4-222	ENST00000604740	IGFALS	P35858	605 aa		5.67	□□□□□ -1.5
LAMA4-222	ENST00000604740	TTC38	Q5R3I4	469 aa		5.67	□□□□□ -1.5
LAMA4-222	ENST00000604740	KRT40	Q6A162	431 aa		5.67	□□□□□ -1.5
LAMA4-222	ENST00000604740	FAM111B	Q6SJ93	734 aa		5.67	□□□□□ -1.5
LAMA4-222	ENST00000604740	ZNF627	Q7L945	461 aa		5.67	□□□□□ -1.5
LAMA4-222	ENST00000604740	MRGPRG	Q86SM5	289 aa		5.67	□□□□□ -1.5
LAMA4-222	ENST00000604740	DYDC2	Q96IM9	177 aa		5.67	□□□□□ -1.5
LAMA4-222	ENST00000604740	TUBGCP5	Q96RT8	1024 aa		5.67	□□□□□ -1.5
LAMA4-222	ENST00000604740	ACSS2	Q9NR19	701 aa		5.67	□□□□□ -1.5
LAMA4-222	ENST00000604740	POLR3B	Q9NW08	1133 aa	Predicted RBP	5.67	□□□□□ -1.5
LAMA4-222	ENST00000604740	RCAN3	Q9UKA8	241 aa		5.67	□□□□□ -1.5
LAMA4-222	ENST00000604740	PTPDC1	A2A3K4	754 aa		5.66	□□□□□ -1.5
LAMA4-222	ENST00000604740		H7C1D1	291 aa		5.66	□□□□□ -1.5
LAMA4-222	ENST00000604740	OPA1	O60313	960 aa		5.66	□□□□□ -1.5
LAMA4-222	ENST00000604740	RPS6KA4	O75676	772 aa		5.66	□□□□□ -1.5
LAMA4-222	ENST00000604740	RANGAP1	P46060	587 aa	Predicted RBP	5.66	□□□□□ -1.5
LAMA4-222	ENST00000604740	MAN2A2	P49641	1150 aa		5.66	□□□□□ -1.5
LAMA4-222	ENST00000604740	ADAM8	P78325	824 aa		5.66	□□□□□ -1.5
LAMA4-222	ENST00000604740	SOGA3	Q5TF21	947 aa		5.66	□□□□□ -1.5
LAMA4-222	ENST00000604740	ZNF662	Q6ZS27	426 aa		5.66	□□□□□ -1.5
LAMA4-222	ENST00000604740	GSPT2	Q8IYD1	628 aa	Known RBP	5.66	□□□□□ -1.5
LAMA4-222	ENST00000604740	NKD2	Q969F2	451 aa	Predicted RBP	5.66	□□□□□ -1.5
LAMA4-222	ENST00000604740	WDR92	Q96MX6	357 aa		5.66	□□□□□ -1.5
LAMA4-222	ENST00000604740	TCF25	Q9BQ70	676 aa		5.66	□□□□□ -1.5
LAMA4-222	ENST00000604740	CABP5	Q9NP86	173 aa		5.66	□□□□□ -1.5
LAMA4-222	ENST00000604740	IL23A	Q9NPF7	189 aa		5.66	□□□□□ -1.5
LAMA4-222	ENST00000604740	KCMF1	Q9P0J7	381 aa		5.66	□□□□□ -1.5
LAMA4-222	ENST00000604740	DNAI1	Q9UI46	699 aa		5.66	□□□□□ -1.5
LAMA4-222	ENST00000604740	TOX4	O94842	621 aa		5.65	□□□□□ -1.5
LAMA4-222	ENST00000604740	PEX11B	O96011	259 aa		5.65	□□□□□ -1.5
LAMA4-222	ENST00000604740	ZNF174	Q15697	407 aa		5.65	□□□□□ -1.5
LAMA4-222	ENST00000604740	GAGE13	Q4V321	117 aa		5.65	□□□□□ -1.5
LAMA4-222	ENST00000604740	LILRB2	Q8N423	598 aa		5.65	□□□□□ -1.5
LAMA4-222	ENST00000604740	KIAA1958	Q8N8K9	716 aa		5.65	□□□□□ -1.5
LAMA4-222	ENST00000604740	PLA2G15	Q8NCC3	412 aa		5.65	□□□□□ -1.5
LAMA4-222	ENST00000604740	RPGR	Q92834	1020 aa	Known RBP	5.65	□□□□□ -1.5
LAMA4-222	ENST00000604740	CLUHP3	Q96NS8	147 aa		5.65	□□□□□ -1.5

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