RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 PCYT2Q99447 389 aa13.53□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 APBA2Q99767 749 aa13.53□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 NUP58Q9BVL2 599 aa13.53□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 GBP3Q9H0R5 595 aa13.53□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 TBC1D7Q9P0N9 293 aa13.53□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 ABT1Q9ULW3 272 aaKnown RBP13.53□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 EXOC7Q9UPT5 735 aa13.53□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 COL1A2P08123 1366 aa13.53□□□□□ -0.24
NEDD8-MDP1-203ENST00000604306 RASSF10A6NK89 507 aa13.52□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 K7ENM7 598 aa13.52□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 SNAI1O95863 264 aaPredicted RBP13.52□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 ATP4AP20648 1035 aa13.52□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 NR2F2P24468 414 aa13.52□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 MTIF2P46199 727 aaKnown RBP13.52□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 NPEPPSP55786 919 aa13.52□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 MCCD1P59942 119 aaPredicted RBP13.52□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 ARHGAP1Q07960 439 aa13.52□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 MIIPQ5JXC2 388 aa13.52□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 FKBP15Q5T1M5 1219 aa13.52□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 UTP14CQ5TAP6 766 aaKnown RBP13.52□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 PLA2G4FQ68DD2 849 aa13.52□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 CNGA4Q8IV77 575 aa13.52□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 ATP8B4Q8TF62 1192 aa13.52□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 TCP11Q8WWU5 503 aa13.52□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 SLC7A3Q8WY07 619 aa13.52□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 IFT74Q96LB3 600 aa13.52□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 SPATA33Q96N06 139 aa13.52□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 NAA15Q9BXJ9 866 aaKnown RBP13.52□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 BCAS3Q9H6U6 928 aa13.52□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 CREBZFQ9NS37 354 aa13.52□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 KCND1Q9NSA2 647 aa13.52□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 CPA4Q9UI42 421 aa13.52□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 Q9Y3F1 56 aa13.52□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 TGFB1I1O43294 461 aa13.51□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 HBP1O60381 514 aa13.51□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 MAFO75444 373 aaPredicted RBP13.51□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 PRPF6O94906 941 aaKnown RBP13.51□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 NR3C1P04150 777 aa13.51□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 XRCC5P13010 732 aaKnown RBP13.51□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 NMT1P30419 496 aaKnown RBP13.51□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 POLGP54098 1239 aaPredicted RBP13.51□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 ADAM9Q13443 819 aa13.51□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 ACVR2BQ13705 512 aa13.51□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 ARID5BQ14865 1188 aa13.51□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 EMC2Q15006 297 aa13.51□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 HSDL1Q3SXM5 330 aa13.51□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 VWA3BQ502W6 1294 aa13.51□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 HSP90AA4PQ58FG1 418 aa13.51□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 EEPD1Q7L9B9 569 aa13.51□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 HAUS6Q7Z4H7 955 aa13.51□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 MAP4K3Q8IVH8 894 aa13.51□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 TRIM59Q8IWR1 403 aa13.51□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 NELFCDQ8IXH7 590 aa13.51□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 CACTINQ8WUQ7 758 aaKnown RBP13.51□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 PANX2Q96RD6 677 aa13.51□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 NOC4LQ9BVI4 516 aaKnown RBP13.51□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 EDEM3Q9BZQ6 932 aa13.51□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 KCNF1Q9H3M0 494 aa13.51□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 XPNPEP1Q9NQW7 623 aa13.51□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 DMAC2Q9NW81 257 aa13.51□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 TAB2Q9NYJ8 693 aa13.51□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 ERAP1Q9NZ08 941 aa13.51□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.51□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 DAAM1Q9Y4D1 1078 aa13.51□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 IGKV6-21A0A0C4DH24 114 aa13.5□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 A0A1W2PQJ5 194 aa13.5□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 KIAA0391O15091 583 aaKnown RBP13.5□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 TEX33O43247 280 aa13.5□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 PPFIA4O75335 1185 aa13.5□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 EPB41P11171 864 aaKnown RBP13.5□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 FECHP22830 423 aa13.5□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 NAMPTP43490 491 aa13.5□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 SP4Q02446 784 aa13.5□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 UBXN1Q04323 297 aa13.5□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 CRHR2Q13324 411 aa13.5□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 CCDC40Q4G0X9 1142 aa13.5□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 FAM102BQ5T8I3 360 aa13.5□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 PPFIBP1Q86W92 1011 aa13.5□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 TMEM161BQ8NDZ6 487 aa13.5□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 NPLOC4Q8TAT6 608 aa13.5□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 VPS16Q9H269 839 aa13.5□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 TMX1Q9H3N1 280 aa13.5□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 NDST4Q9H3R1 872 aa13.5□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 KMT5AQ9NQR1 393 aa13.5□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 ARHGAP28Q9P2N2 729 aa13.5□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 GTPBP10A4D1E9 387 aaKnown RBP13.49□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 SFI1A8K8P3 1242 aa13.49□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 STX10O60499 249 aa13.49□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 PSMC2P35998 433 aaKnown RBP13.49□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 ARL2P36404 184 aa13.49□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 NPTX2P47972 431 aa13.49□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 FCGRTP55899 365 aa13.49□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 PEX3P56589 373 aa13.49□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 CCZ1BP86790 482 aa13.49□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 CCZ1P86791 482 aaPredicted RBP13.49□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 TBC1D8BQ0IIM8 1120 aa13.49□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 MTERF2Q49AM1 385 aa13.49□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 BRDTQ58F21 947 aaPredicted RBP13.49□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 ZNF484Q5JVG2 852 aa13.49□□□□□ -0.25
NEDD8-MDP1-203ENST00000604306 IER5Q5VY09 327 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms