RNA–Protein interactions for RNA: ENST00000602223.5

STRN4-223, Transcript of striatin 4, human

TSL 4

Gene STRN4, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRN4-223	ENST00000602223	SLC24A5	Q71RS6	500 aa		13.9	□□□□□ -0.18
STRN4-223	ENST00000602223	FBXO18	Q8NFZ0	1043 aa		13.9	□□□□□ -0.18
STRN4-223	ENST00000602223	SYMPK	Q92797	1274 aa	Known RBP	13.9	□□□□□ -0.18
STRN4-223	ENST00000602223	DYDC2	Q96IM9	177 aa		13.9	□□□□□ -0.18
STRN4-223	ENST00000602223	ZNF668	Q96K58	619 aa	Predicted RBP	13.9	□□□□□ -0.18
STRN4-223	ENST00000602223	ASB2	Q96Q27	587 aa		13.9	□□□□□ -0.18
STRN4-223	ENST00000602223	MTMR9	Q96QG7	549 aa		13.9	□□□□□ -0.18
STRN4-223	ENST00000602223	JPH2	Q9BR39	696 aa	Predicted RBP	13.9	□□□□□ -0.18
STRN4-223	ENST00000602223	LXN	Q9BS40	222 aa		13.9	□□□□□ -0.18
STRN4-223	ENST00000602223	CYP26B1	Q9NR63	512 aa		13.9	□□□□□ -0.18
STRN4-223	ENST00000602223	RNF216	Q9NWF9	866 aa	Predicted RBP	13.9	□□□□□ -0.18
STRN4-223	ENST00000602223	RGL1	Q9NZL6	768 aa		13.9	□□□□□ -0.18
STRN4-223	ENST00000602223	LRFN2	Q9ULH4	789 aa		13.9	□□□□□ -0.18
STRN4-223	ENST00000602223	PCDHA12	Q9UN75	941 aa		13.9	□□□□□ -0.18
STRN4-223	ENST00000602223	PPME1	Q9Y570	386 aa		13.9	□□□□□ -0.18
STRN4-223	ENST00000602223	PCDHB7	Q9Y5E2	793 aa		13.9	□□□□□ -0.18
STRN4-223	ENST00000602223	TTC28	Q96AY4	2481 aa		13.89	□□□□□ -0.19
STRN4-223	ENST00000602223	GATM	P50440	423 aa		13.89	□□□□□ -0.19
STRN4-223	ENST00000602223	DNM2	P50570	870 aa		13.89	□□□□□ -0.19
STRN4-223	ENST00000602223	NPEPPS	P55786	919 aa		13.89	□□□□□ -0.19
STRN4-223	ENST00000602223	FAM189B	P81408	668 aa		13.89	□□□□□ -0.19
STRN4-223	ENST00000602223	PTPRO	Q16827	1216 aa		13.89	□□□□□ -0.19
STRN4-223	ENST00000602223	FAM184A	Q8NB25	1140 aa		13.89	□□□□□ -0.19
STRN4-223	ENST00000602223	IL27	Q8NEV9	243 aa		13.89	□□□□□ -0.19
STRN4-223	ENST00000602223	NLRP7	Q8WX94	980 aa		13.89	□□□□□ -0.19
STRN4-223	ENST00000602223	MRPL38	Q96DV4	380 aa	Known RBP	13.89	□□□□□ -0.19
STRN4-223	ENST00000602223	FOXP1	Q9H334	677 aa	Predicted RBP	13.89	□□□□□ -0.19
STRN4-223	ENST00000602223	DHX33	Q9H6R0	707 aa	Known RBP	13.89	□□□□□ -0.19
STRN4-223	ENST00000602223	ELAC1	Q9H777	363 aa	Known RBP	13.89	□□□□□ -0.19
STRN4-223	ENST00000602223	ZSWIM4	Q9H7M6	989 aa		13.89	□□□□□ -0.19
STRN4-223	ENST00000602223	TTC12	Q9H892	705 aa	Predicted RBP	13.89	□□□□□ -0.19
STRN4-223	ENST00000602223	COG5	Q9UP83	839 aa		13.89	□□□□□ -0.19
STRN4-223	ENST00000602223	MRPL42	Q9Y6G3	142 aa	Known RBP	13.89	□□□□□ -0.19
STRN4-223	ENST00000602223	MUC3A	Q02505	3323 aa		13.88	□□□□□ -0.19
STRN4-223	ENST00000602223	ST18	O60284	1047 aa		13.88	□□□□□ -0.19
STRN4-223	ENST00000602223	SLITRK3	O94933	977 aa		13.88	□□□□□ -0.19
STRN4-223	ENST00000602223	YWHAB	P31946	246 aa	Known RBP	13.88	□□□□□ -0.19
STRN4-223	ENST00000602223	CYP4A11	Q02928	519 aa		13.88	□□□□□ -0.19
STRN4-223	ENST00000602223	CTTN	Q14247	550 aa	Known RBP	13.88	□□□□□ -0.19
STRN4-223	ENST00000602223	PAN2	Q504Q3	1202 aa	Known RBP	13.88	□□□□□ -0.19
STRN4-223	ENST00000602223	ZNF410	Q86VK4	478 aa		13.88	□□□□□ -0.19
STRN4-223	ENST00000602223	ZNF579	Q8NAF0	562 aa	Known RBP	13.88	□□□□□ -0.19
STRN4-223	ENST00000602223	NEK9	Q8TD19	979 aa		13.88	□□□□□ -0.19
STRN4-223	ENST00000602223	CEP170P1	Q96L14	293 aa		13.88	□□□□□ -0.19
STRN4-223	ENST00000602223	SCLT1	Q96NL6	688 aa		13.88	□□□□□ -0.19
STRN4-223	ENST00000602223	EIF2AK1	Q9BQI3	630 aa	Known RBP	13.88	□□□□□ -0.19
STRN4-223	ENST00000602223	C11orf84	Q9BUA3	381 aa	Predicted RBP	13.88	□□□□□ -0.19
STRN4-223	ENST00000602223	PLVAP	Q9BX97	442 aa		13.88	□□□□□ -0.19
STRN4-223	ENST00000602223	GCOM2	Q9BZD3	368 aa	Predicted RBP	13.88	□□□□□ -0.19
STRN4-223	ENST00000602223	TMEM60	Q9H2L4	133 aa		13.88	□□□□□ -0.19
STRN4-223	ENST00000602223	UPF2	Q9HAU5	1272 aa	Known RBP	13.88	□□□□□ -0.19
STRN4-223	ENST00000602223	TMEM161A	Q9NX61	479 aa		13.88	□□□□□ -0.19
STRN4-223	ENST00000602223	SUCLA2	Q9P2R7	463 aa	Predicted RBP	13.88	□□□□□ -0.19
STRN4-223	ENST00000602223		A0A087WZ62	844 aa		13.87	□□□□□ -0.19
STRN4-223	ENST00000602223	LYPLA2	O95372	231 aa		13.87	□□□□□ -0.19
STRN4-223	ENST00000602223	ZSCAN20	P17040	1043 aa	Predicted RBP	13.87	□□□□□ -0.19
STRN4-223	ENST00000602223	IBSP	P21815	317 aa	Predicted RBP	13.87	□□□□□ -0.19
STRN4-223	ENST00000602223	FGFR4	P22455	802 aa		13.87	□□□□□ -0.19
STRN4-223	ENST00000602223	MCM7	P33993	719 aa		13.87	□□□□□ -0.19
STRN4-223	ENST00000602223	RFC5	P40937	340 aa		13.87	□□□□□ -0.19
STRN4-223	ENST00000602223	TXK	P42681	527 aa		13.87	□□□□□ -0.19
STRN4-223	ENST00000602223	POLG	P54098	1239 aa	Predicted RBP	13.87	□□□□□ -0.19
STRN4-223	ENST00000602223	TFF2	Q03403	129 aa		13.87	□□□□□ -0.19
STRN4-223	ENST00000602223	ORC2	Q13416	577 aa	Predicted RBP	13.87	□□□□□ -0.19
STRN4-223	ENST00000602223	AAK1	Q2M2I8	961 aa		13.87	□□□□□ -0.19
STRN4-223	ENST00000602223	TIGD5	Q53EQ6	642 aa		13.87	□□□□□ -0.19
STRN4-223	ENST00000602223	FAM102B	Q5T8I3	360 aa		13.87	□□□□□ -0.19
STRN4-223	ENST00000602223	OTUD6A	Q7L8S5	288 aa		13.87	□□□□□ -0.19
STRN4-223	ENST00000602223	RHPN2	Q8IUC4	686 aa		13.87	□□□□□ -0.19
STRN4-223	ENST00000602223	TPH2	Q8IWU9	490 aa		13.87	□□□□□ -0.19
STRN4-223	ENST00000602223	EXOC8	Q8IYI6	725 aa		13.87	□□□□□ -0.19
STRN4-223	ENST00000602223	SLC7A3	Q8WY07	619 aa		13.87	□□□□□ -0.19
STRN4-223	ENST00000602223	P2RX5	Q93086	422 aa		13.87	□□□□□ -0.19
STRN4-223	ENST00000602223	HLA-C	Q95604	372 aa		13.87	□□□□□ -0.19
STRN4-223	ENST00000602223	HSD17B14	Q9BPX1	270 aa		13.87	□□□□□ -0.19
STRN4-223	ENST00000602223	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.87	□□□□□ -0.19
STRN4-223	ENST00000602223	LMAN2L	Q9H0V9	348 aa		13.87	□□□□□ -0.19
STRN4-223	ENST00000602223	ZBTB39	O15060	712 aa		13.86	□□□□□ -0.19
STRN4-223	ENST00000602223	GRM6	O15303	877 aa		13.86	□□□□□ -0.19
STRN4-223	ENST00000602223	GAS2	O43903	313 aa	Known RBP	13.86	□□□□□ -0.19
STRN4-223	ENST00000602223	ATP2B1	P20020	1258 aa		13.86	□□□□□ -0.19
STRN4-223	ENST00000602223	NAALADL2	Q58DX5	795 aa		13.86	□□□□□ -0.19
STRN4-223	ENST00000602223	XKR9	Q5GH70	373 aa		13.86	□□□□□ -0.19
STRN4-223	ENST00000602223	NOSTRIN	Q8IVI9	506 aa		13.86	□□□□□ -0.19
STRN4-223	ENST00000602223	KSR1	Q8IVT5	923 aa		13.86	□□□□□ -0.19
STRN4-223	ENST00000602223	TBC1D32	Q96NH3	1257 aa		13.86	□□□□□ -0.19
STRN4-223	ENST00000602223	INO80B	Q9C086	356 aa	Predicted RBP	13.86	□□□□□ -0.19
STRN4-223	ENST00000602223	ATP6V0A4	Q9HBG4	840 aa		13.86	□□□□□ -0.19
STRN4-223	ENST00000602223	COL4A3BP	Q9Y5P4	624 aa		13.86	□□□□□ -0.19
STRN4-223	ENST00000602223	POTEM	A6NI47	508 aa		13.85	□□□□□ -0.19
STRN4-223	ENST00000602223	TBKBP1	A7MCY6	615 aa		13.85	□□□□□ -0.19
STRN4-223	ENST00000602223	CSDE1	O75534	798 aa	Known RBP	13.85	□□□□□ -0.19
STRN4-223	ENST00000602223	CD2BP2	O95400	341 aa	Known RBP	13.85	□□□□□ -0.19
STRN4-223	ENST00000602223	FGFR1	P11362	822 aa		13.85	□□□□□ -0.19
STRN4-223	ENST00000602223	BMP1	P13497	986 aa		13.85	□□□□□ -0.19
STRN4-223	ENST00000602223	SFPQ	P23246	707 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
STRN4-223	ENST00000602223	U2AF2	P26368	475 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
STRN4-223	ENST00000602223	TRAPPC10	P48553	1259 aa		13.85	□□□□□ -0.19
STRN4-223	ENST00000602223	EMC2	Q15006	297 aa		13.85	□□□□□ -0.19
STRN4-223	ENST00000602223	TTC38	Q5R3I4	469 aa		13.85	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms