RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 C5orf42Q9H799 3197 aa20.32■□□□□ 0.84
CHMP2A-208ENST00000601220 GAS7O60861 476 aa20.31■□□□□ 0.84
CHMP2A-208ENST00000601220 REC8O95072 547 aa20.31■□□□□ 0.84
CHMP2A-208ENST00000601220 DARSP14868 501 aaKnown RBP20.31■□□□□ 0.84
CHMP2A-208ENST00000601220 SFNP31947 248 aa20.31■□□□□ 0.84
CHMP2A-208ENST00000601220 JAK3P52333 1124 aa20.31■□□□□ 0.84
CHMP2A-208ENST00000601220 PLCB3Q01970 1234 aa20.31■□□□□ 0.84
CHMP2A-208ENST00000601220 DUSP6Q16828 381 aa20.31■□□□□ 0.84
CHMP2A-208ENST00000601220 SPOUT1Q5T280 376 aaKnown RBP20.31■□□□□ 0.84
CHMP2A-208ENST00000601220 ECHDC2Q86YB7 292 aa20.31■□□□□ 0.84
CHMP2A-208ENST00000601220 ZNF668Q96K58 619 aaPredicted RBP20.31■□□□□ 0.84
CHMP2A-208ENST00000601220 MAP7D2Q96T17 732 aa20.31■□□□□ 0.84
CHMP2A-208ENST00000601220 NIFKQ9BYG3 293 aaKnown RBP20.31■□□□□ 0.84
CHMP2A-208ENST00000601220 TCEAL9Q9UHQ7 104 aa20.31■□□□□ 0.84
CHMP2A-208ENST00000601220 PCDHA4Q9UN74 947 aa20.31■□□□□ 0.84
CHMP2A-208ENST00000601220 LZTS1Q9Y250 596 aa20.31■□□□□ 0.84
CHMP2A-208ENST00000601220 FNDC1Q4ZHG4 1894 aaPredicted RBP20.3■□□□□ 0.84
CHMP2A-208ENST00000601220 LOC730098B7Z3J9 87 aa20.3■□□□□ 0.84
CHMP2A-208ENST00000601220 EPB41L2O43491 1005 aaKnown RBP20.3■□□□□ 0.84
CHMP2A-208ENST00000601220 LAG3P18627 525 aa20.3■□□□□ 0.84
CHMP2A-208ENST00000601220 TMOD1P28289 359 aa20.3■□□□□ 0.84
CHMP2A-208ENST00000601220 NLRP5P59047 1200 aa20.3■□□□□ 0.84
CHMP2A-208ENST00000601220 DRP2Q13474 957 aa20.3■□□□□ 0.84
CHMP2A-208ENST00000601220 CBX2Q14781 532 aaPredicted RBP20.3■□□□□ 0.84
CHMP2A-208ENST00000601220 CSPP1Q1MSJ5 1256 aa20.3■□□□□ 0.84
CHMP2A-208ENST00000601220 LRCH2Q5VUJ6 765 aa20.3■□□□□ 0.84
CHMP2A-208ENST00000601220 ZNF598Q86UK7 904 aaKnown RBP20.3■□□□□ 0.84
CHMP2A-208ENST00000601220 THNSL1Q8IYQ7 743 aa20.3■□□□□ 0.84
CHMP2A-208ENST00000601220 MICAL1Q8TDZ2 1067 aa20.3■□□□□ 0.84
CHMP2A-208ENST00000601220 TEKT3Q9BXF9 490 aa20.3■□□□□ 0.84
CHMP2A-208ENST00000601220 USP15Q9Y4E8 981 aaPredicted RBP20.3■□□□□ 0.84
CHMP2A-208ENST00000601220 EVPLQ92817 2033 aa20.3■□□□□ 0.84
CHMP2A-208ENST00000601220 PLXNA4Q9HCM2 1894 aa20.3■□□□□ 0.84
CHMP2A-208ENST00000601220 IGKV6-21A0A0C4DH24 114 aa20.29■□□□□ 0.84
CHMP2A-208ENST00000601220 CHMP2AO43633 222 aa20.29■□□□□ 0.84
CHMP2A-208ENST00000601220 TDP2O95551 362 aa20.29■□□□□ 0.84
CHMP2A-208ENST00000601220 SSRP1Q08945 709 aaKnown RBP20.29■□□□□ 0.84
CHMP2A-208ENST00000601220 CLLU1OSQ5K130 101 aa20.29■□□□□ 0.84
CHMP2A-208ENST00000601220 PDE12Q6L8Q7 609 aaKnown RBP20.29■□□□□ 0.84
CHMP2A-208ENST00000601220 TMEM184AQ6ZMB5 413 aa20.29■□□□□ 0.84
CHMP2A-208ENST00000601220 HFE2Q6ZVN8 426 aa20.29■□□□□ 0.84
CHMP2A-208ENST00000601220 DAGLBQ8NCG7 672 aa20.29■□□□□ 0.84
CHMP2A-208ENST00000601220 RDM1Q8NG50 284 aa20.29■□□□□ 0.84
CHMP2A-208ENST00000601220 ETNPPLQ8TBG4 499 aa20.29■□□□□ 0.84
CHMP2A-208ENST00000601220 SUSD6Q92537 303 aa20.29■□□□□ 0.84
CHMP2A-208ENST00000601220 MRPS27Q92552 414 aaKnown RBP20.29■□□□□ 0.84
CHMP2A-208ENST00000601220 ZNF274Q96GC6 653 aaPredicted RBP20.29■□□□□ 0.84
CHMP2A-208ENST00000601220 CDCA3Q99618 268 aaPredicted RBP20.29■□□□□ 0.84
CHMP2A-208ENST00000601220 A0A0U1RQF3 1178 aa20.28■□□□□ 0.84
CHMP2A-208ENST00000601220 TMEM150BA6NC51 233 aa20.28■□□□□ 0.84
CHMP2A-208ENST00000601220 HOXA2O43364 376 aa20.28■□□□□ 0.84
CHMP2A-208ENST00000601220 ZSCAN20P17040 1043 aaPredicted RBP20.28■□□□□ 0.84
CHMP2A-208ENST00000601220 ATF7P17544 494 aaPredicted RBP20.28■□□□□ 0.84
CHMP2A-208ENST00000601220 FGFR4P22455 802 aa20.28■□□□□ 0.84
CHMP2A-208ENST00000601220 KCNT2Q6UVM3 1135 aa20.28■□□□□ 0.84
CHMP2A-208ENST00000601220 BLIDQ8IZY5 108 aa20.28■□□□□ 0.84
CHMP2A-208ENST00000601220 AIFM3Q96NN9 605 aa20.28■□□□□ 0.84
CHMP2A-208ENST00000601220 LARP6Q9BRS8 491 aaKnown RBP20.28■□□□□ 0.84
CHMP2A-208ENST00000601220 C22orf23Q9BZE7 217 aa20.28■□□□□ 0.84
CHMP2A-208ENST00000601220 TM6SF1Q9BZW5 370 aa20.28■□□□□ 0.84
CHMP2A-208ENST00000601220 S1PR5Q9H228 398 aa20.28■□□□□ 0.84
CHMP2A-208ENST00000601220 CSDE1O75534 798 aaKnown RBP20.27■□□□□ 0.84
CHMP2A-208ENST00000601220 DEXIO95424 95 aa20.27■□□□□ 0.84
CHMP2A-208ENST00000601220 PBX3P40426 434 aa20.27■□□□□ 0.84
CHMP2A-208ENST00000601220 TBC1D8BQ0IIM8 1120 aa20.27■□□□□ 0.84
CHMP2A-208ENST00000601220 XKR3Q5GH77 459 aa20.27■□□□□ 0.84
CHMP2A-208ENST00000601220 MOXD1Q6UVY6 613 aa20.27■□□□□ 0.84
CHMP2A-208ENST00000601220 MIER3Q7Z3K6 550 aa20.27■□□□□ 0.84
CHMP2A-208ENST00000601220 TRIM22Q8IYM9 498 aa20.27■□□□□ 0.84
CHMP2A-208ENST00000601220 EDAQ92838 391 aa20.27■□□□□ 0.84
CHMP2A-208ENST00000601220 MUC6Q6W4X9 2439 aa20.26■□□□□ 0.83
CHMP2A-208ENST00000601220 HIDE1A8MVS5 230 aa20.26■□□□□ 0.83
CHMP2A-208ENST00000601220 EOMESO95936 686 aa20.26■□□□□ 0.83
CHMP2A-208ENST00000601220 FAM177A1Q8N128 213 aaPredicted RBP20.26■□□□□ 0.83
CHMP2A-208ENST00000601220 LRRC43Q8N309 656 aa20.26■□□□□ 0.83
CHMP2A-208ENST00000601220 SH2D3AQ9BRG2 576 aa20.26■□□□□ 0.83
CHMP2A-208ENST00000601220 PHF7Q9BWX1 381 aaPredicted RBP20.26■□□□□ 0.83
CHMP2A-208ENST00000601220 CYP46A1Q9Y6A2 500 aa20.26■□□□□ 0.83
CHMP2A-208ENST00000601220 MYH9P35579 1960 aaKnown RBP20.25■□□□□ 0.83
CHMP2A-208ENST00000601220 PLPP4Q5VZY2 271 aa20.25■□□□□ 0.83
CHMP2A-208ENST00000601220 GALNT17Q6IS24 598 aa20.25■□□□□ 0.83
CHMP2A-208ENST00000601220 SYCE2Q6PIF2 218 aa20.25■□□□□ 0.83
CHMP2A-208ENST00000601220 ANO5Q75V66 913 aa20.25■□□□□ 0.83
CHMP2A-208ENST00000601220 SLC39A11Q8N1S5 342 aa20.25■□□□□ 0.83
CHMP2A-208ENST00000601220 NLRP7Q8WX94 980 aa20.25■□□□□ 0.83
CHMP2A-208ENST00000601220 ZNF558Q96NG5 402 aa20.25■□□□□ 0.83
CHMP2A-208ENST00000601220 TCF25Q9BQ70 676 aa20.25■□□□□ 0.83
CHMP2A-208ENST00000601220 TRAIPQ9BWF2 469 aa20.25■□□□□ 0.83
CHMP2A-208ENST00000601220 NGRNQ9NPE2 291 aaKnown RBP20.25■□□□□ 0.83
CHMP2A-208ENST00000601220 CHST12Q9NRB3 414 aa20.25■□□□□ 0.83
CHMP2A-208ENST00000601220 PUF60Q9UHX1 559 aaKnown RBP20.25■□□□□ 0.83
CHMP2A-208ENST00000601220 FSD2A1L4K1 749 aa20.24■□□□□ 0.83
CHMP2A-208ENST00000601220 EML1O00423 815 aa20.24■□□□□ 0.83
CHMP2A-208ENST00000601220 SLC37A4O43826 429 aa20.24■□□□□ 0.83
CHMP2A-208ENST00000601220 MAFO75444 373 aaPredicted RBP20.24■□□□□ 0.83
CHMP2A-208ENST00000601220 CDC42EP1Q00587 391 aa20.24■□□□□ 0.83
CHMP2A-208ENST00000601220 MTERF2Q49AM1 385 aa20.24■□□□□ 0.83
CHMP2A-208ENST00000601220 ANKRD54Q6NXT1 300 aa20.24■□□□□ 0.83
CHMP2A-208ENST00000601220 RNF169Q8NCN4 708 aa20.24■□□□□ 0.83
CHMP2A-208ENST00000601220 HELQQ8TDG4 1101 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms