RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 EXOC1Q9NV70 894 aa12.78□□□□□ -0.36
ZNF548-211ENST00000600927 SLC9A2Q9UBY0 812 aa12.78□□□□□ -0.36
ZNF548-211ENST00000600927 KIAA1024Q9UPX6 916 aa12.78□□□□□ -0.36
ZNF548-211ENST00000600927 CDH23Q9H251 3354 aa12.78□□□□□ -0.36
ZNF548-211ENST00000600927 IGKV6D-21A0A0A0MT36 114 aa12.77□□□□□ -0.37
ZNF548-211ENST00000600927 BICDL2A1A5D9 508 aa12.77□□□□□ -0.37
ZNF548-211ENST00000600927 MYMKA6NI61 221 aa12.77□□□□□ -0.37
ZNF548-211ENST00000600927 LRRC10BA6NIK2 292 aa12.77□□□□□ -0.37
ZNF548-211ENST00000600927 PSMA7O14818 248 aa12.77□□□□□ -0.37
ZNF548-211ENST00000600927 AP5Z1O43299 807 aa12.77□□□□□ -0.37
ZNF548-211ENST00000600927 DKC1O60832 514 aaKnown RBP eCLIP12.77□□□□□ -0.37
ZNF548-211ENST00000600927 MED24O75448 989 aa12.77□□□□□ -0.37
ZNF548-211ENST00000600927 SLITRK3O94933 977 aa12.77□□□□□ -0.37
ZNF548-211ENST00000600927 P4HBP07237 508 aaKnown RBP12.77□□□□□ -0.37
ZNF548-211ENST00000600927 PLA2G4BP0C869 781 aa12.77□□□□□ -0.37
ZNF548-211ENST00000600927 SMIM10L2AP0DMW4 78 aa12.77□□□□□ -0.37
ZNF548-211ENST00000600927 SMIM10L2BP0DMW5 78 aa12.77□□□□□ -0.37
ZNF548-211ENST00000600927 ZNF18P17022 549 aa12.77□□□□□ -0.37
ZNF548-211ENST00000600927 JAK3P52333 1124 aa12.77□□□□□ -0.37
ZNF548-211ENST00000600927 ASIC1P78348 528 aa12.77□□□□□ -0.37
ZNF548-211ENST00000600927 PLCB2Q00722 1185 aa12.77□□□□□ -0.37
ZNF548-211ENST00000600927 KRT76Q01546 638 aa12.77□□□□□ -0.37
ZNF548-211ENST00000600927 PAK1Q13153 545 aa12.77□□□□□ -0.37
ZNF548-211ENST00000600927 PTK7Q13308 1070 aa12.77□□□□□ -0.37
ZNF548-211ENST00000600927 MCM6Q14566 821 aa12.77□□□□□ -0.37
ZNF548-211ENST00000600927 ECM1Q16610 540 aa12.77□□□□□ -0.37
ZNF548-211ENST00000600927 NCAPH2Q6IBW4 605 aa12.77□□□□□ -0.37
ZNF548-211ENST00000600927 PSRC1Q6PGN9 363 aaPredicted RBP12.77□□□□□ -0.37
ZNF548-211ENST00000600927 SERINC5Q86VE9 423 aa12.77□□□□□ -0.37
ZNF548-211ENST00000600927 CCDC65Q8IXS2 484 aa12.77□□□□□ -0.37
ZNF548-211ENST00000600927 AFAP1L1Q8TED9 768 aa12.77□□□□□ -0.37
ZNF548-211ENST00000600927 LRRC15Q8TF66 581 aa12.77□□□□□ -0.37
ZNF548-211ENST00000600927 DDX12PQ92771 950 aa12.77□□□□□ -0.37
ZNF548-211ENST00000600927 STAMQ92783 540 aa12.77□□□□□ -0.37
ZNF548-211ENST00000600927 WNT8BQ93098 351 aa12.77□□□□□ -0.37
ZNF548-211ENST00000600927 PKD2L1Q9P0L9 805 aa12.77□□□□□ -0.37
ZNF548-211ENST00000600927 IMPACTQ9P2X3 320 aa12.77□□□□□ -0.37
ZNF548-211ENST00000600927 ZNF215Q9UL58 517 aaPredicted RBP12.77□□□□□ -0.37
ZNF548-211ENST00000600927 A0A087WWV3 80 aa12.76□□□□□ -0.37
ZNF548-211ENST00000600927 FRMD3A2A2Y4 597 aa12.76□□□□□ -0.37
ZNF548-211ENST00000600927 CCNE2O96020 404 aa12.76□□□□□ -0.37
ZNF548-211ENST00000600927 IQCF3P0C7M6 154 aa12.76□□□□□ -0.37
ZNF548-211ENST00000600927 RFC2P35250 354 aa12.76□□□□□ -0.37
ZNF548-211ENST00000600927 SLC12A3P55017 1021 aa12.76□□□□□ -0.37
ZNF548-211ENST00000600927 CCL23P55773 120 aa12.76□□□□□ -0.37
ZNF548-211ENST00000600927 ACTR2P61160 394 aa12.76□□□□□ -0.37
ZNF548-211ENST00000600927 ZNF200P98182 395 aaPredicted RBP12.76□□□□□ -0.37
ZNF548-211ENST00000600927 SP4Q02446 784 aa12.76□□□□□ -0.37
ZNF548-211ENST00000600927 BFSP2Q13515 415 aa12.76□□□□□ -0.37
ZNF548-211ENST00000600927 GPNMBQ14956 572 aa12.76□□□□□ -0.37
ZNF548-211ENST00000600927 ZNF746Q6NUN9 644 aaPredicted RBP12.76□□□□□ -0.37
ZNF548-211ENST00000600927 GUF1Q8N442 669 aaKnown RBP12.76□□□□□ -0.37
ZNF548-211ENST00000600927 DNAJC19Q96DA6 116 aa12.76□□□□□ -0.37
ZNF548-211ENST00000600927 SCLYQ96I15 445 aa12.76□□□□□ -0.37
ZNF548-211ENST00000600927 PLIN2Q99541 437 aa12.76□□□□□ -0.37
ZNF548-211ENST00000600927 HSD3B7Q9H2F3 369 aa12.76□□□□□ -0.37
ZNF548-211ENST00000600927 RNPEPQ9H4A4 650 aa12.76□□□□□ -0.37
ZNF548-211ENST00000600927 TCEAL9Q9UHQ7 104 aa12.76□□□□□ -0.37
ZNF548-211ENST00000600927 NFE2L3Q9Y4A8 694 aa12.76□□□□□ -0.37
ZNF548-211ENST00000600927 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.75□□□□□ -0.37
ZNF548-211ENST00000600927 POTEB3A0JP26 581 aa12.75□□□□□ -0.37
ZNF548-211ENST00000600927 C17orf102A2RUQ5 167 aa12.75□□□□□ -0.37
ZNF548-211ENST00000600927 EML1O00423 815 aa12.75□□□□□ -0.37
ZNF548-211ENST00000600927 PFKMP08237 780 aa12.75□□□□□ -0.37
ZNF548-211ENST00000600927 PRKCSHP14314 528 aaPredicted RBP12.75□□□□□ -0.37
ZNF548-211ENST00000600927 CD44P16070 742 aaKnown RBP12.75□□□□□ -0.37
ZNF548-211ENST00000600927 CYP11B2P19099 503 aa12.75□□□□□ -0.37
ZNF548-211ENST00000600927 CCNE1P24864 410 aa12.75□□□□□ -0.37
ZNF548-211ENST00000600927 CASP1P29466 404 aa12.75□□□□□ -0.37
ZNF548-211ENST00000600927 PRCPP42785 496 aa12.75□□□□□ -0.37
ZNF548-211ENST00000600927 FANCCQ00597 558 aa12.75□□□□□ -0.37
ZNF548-211ENST00000600927 UTP14CQ5TAP6 766 aaKnown RBP12.75□□□□□ -0.37
ZNF548-211ENST00000600927 POTEBQ6S5H4 581 aa12.75□□□□□ -0.37
ZNF548-211ENST00000600927 ABHD15Q6UXT9 468 aa12.75□□□□□ -0.37
ZNF548-211ENST00000600927 ZNF365Q70YC5 407 aa12.75□□□□□ -0.37
ZNF548-211ENST00000600927 KCNK18Q7Z418 384 aa12.75□□□□□ -0.37
ZNF548-211ENST00000600927 SMAP1Q8IYB5 467 aaPredicted RBP12.75□□□□□ -0.37
ZNF548-211ENST00000600927 CCDC155Q8N6L0 562 aa12.75□□□□□ -0.37
ZNF548-211ENST00000600927 LMBR1Q8WVP7 490 aa12.75□□□□□ -0.37
ZNF548-211ENST00000600927 HERVK_113Q902F9 699 aa12.75□□□□□ -0.37
ZNF548-211ENST00000600927 RNPC3Q96LT9 517 aaKnown RBP12.75□□□□□ -0.37
ZNF548-211ENST00000600927 TIPINQ9BVW5 301 aa12.75□□□□□ -0.37
ZNF548-211ENST00000600927 ZSWIM4Q9H7M6 989 aa12.75□□□□□ -0.37
ZNF548-211ENST00000600927 FANCLQ9NW38 375 aa12.75□□□□□ -0.37
ZNF548-211ENST00000600927 ERAP1Q9NZ08 941 aa12.75□□□□□ -0.37
ZNF548-211ENST00000600927 NOD1Q9Y239 953 aa12.75□□□□□ -0.37
ZNF548-211ENST00000600927 SCN5AQ14524 2016 aa12.74□□□□□ -0.37
ZNF548-211ENST00000600927 NRCAMQ92823 1304 aa12.74□□□□□ -0.37
ZNF548-211ENST00000600927 MBLAC1A4D2B0 266 aaPredicted RBP12.74□□□□□ -0.37
ZNF548-211ENST00000600927 E9PMD0 336 aa12.74□□□□□ -0.37
ZNF548-211ENST00000600927 FGFR1OPO95684 399 aaKnown RBP12.74□□□□□ -0.37
ZNF548-211ENST00000600927 CXCL10P02778 98 aa12.74□□□□□ -0.37
ZNF548-211ENST00000600927 PTMAP06454 111 aaKnown RBP12.74□□□□□ -0.37
ZNF548-211ENST00000600927 ACRP10323 421 aa12.74□□□□□ -0.37
ZNF548-211ENST00000600927 CKBP12277 381 aa12.74□□□□□ -0.37
ZNF548-211ENST00000600927 SELPP16109 830 aa12.74□□□□□ -0.37
ZNF548-211ENST00000600927 CDK11BP21127 795 aaKnown RBP12.74□□□□□ -0.37
ZNF548-211ENST00000600927 UBASH3AP57075 661 aa12.74□□□□□ -0.37
ZNF548-211ENST00000600927 CHMP4BP1P59074 171 aa12.74□□□□□ -0.37
ZNF548-211ENST00000600927 SMAD3P84022 425 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms