RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 XPNPEP1Q9NQW7 623 aa19.43■□□□□ 0.7
SHKBP1-224ENST00000600718 TGFB1I1O43294 461 aa19.43■□□□□ 0.7
SHKBP1-224ENST00000600718 GTF2BQ00403 316 aa19.43■□□□□ 0.7
SHKBP1-224ENST00000600718 KCNA1Q09470 495 aa19.43■□□□□ 0.7
SHKBP1-224ENST00000600718 DMP1Q13316 513 aaPredicted RBP19.43■□□□□ 0.7
SHKBP1-224ENST00000600718 HAUS6Q7Z4H7 955 aa19.43■□□□□ 0.7
SHKBP1-224ENST00000600718 CCDC150Q8NCX0 1101 aa19.43■□□□□ 0.7
SHKBP1-224ENST00000600718 GOLGA5Q8TBA6 731 aa19.43■□□□□ 0.7
SHKBP1-224ENST00000600718 ATP8B4Q8TF62 1192 aa19.43■□□□□ 0.7
SHKBP1-224ENST00000600718 NOC4LQ9BVI4 516 aaKnown RBP19.43■□□□□ 0.7
SHKBP1-224ENST00000600718 TMEM206Q9H813 350 aa19.43■□□□□ 0.7
SHKBP1-224ENST00000600718 ZHX1Q9UKY1 873 aaPredicted RBP19.43■□□□□ 0.7
SHKBP1-224ENST00000600718 NR2F2P24468 414 aa19.42■□□□□ 0.7
SHKBP1-224ENST00000600718 DNM2P50570 870 aa19.42■□□□□ 0.7
SHKBP1-224ENST00000600718 APLP1P51693 650 aa19.42■□□□□ 0.7
SHKBP1-224ENST00000600718 MARSP56192 900 aaKnown RBP19.42■□□□□ 0.7
SHKBP1-224ENST00000600718 UBXN1Q04323 297 aa19.42■□□□□ 0.7
SHKBP1-224ENST00000600718 TBX2Q13207 712 aaPredicted RBP19.42■□□□□ 0.7
SHKBP1-224ENST00000600718 EMC2Q15006 297 aa19.42■□□□□ 0.7
SHKBP1-224ENST00000600718 HS2ST1Q7LGA3 356 aa19.42■□□□□ 0.7
SHKBP1-224ENST00000600718 LRRC8AQ8IWT6 810 aa19.42■□□□□ 0.7
SHKBP1-224ENST00000600718 EXOC8Q8IYI6 725 aa19.42■□□□□ 0.7
SHKBP1-224ENST00000600718 SLC7A3Q8WY07 619 aa19.42■□□□□ 0.7
SHKBP1-224ENST00000600718 ACCSQ96QU6 501 aa19.42■□□□□ 0.7
SHKBP1-224ENST00000600718 APBA2Q99767 749 aa19.42■□□□□ 0.7
SHKBP1-224ENST00000600718 ITIH6Q6UXX5 1313 aa19.41■□□□□ 0.7
SHKBP1-224ENST00000600718 MYH9P35579 1960 aaKnown RBP19.41■□□□□ 0.7
SHKBP1-224ENST00000600718 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.41■□□□□ 0.7
SHKBP1-224ENST00000600718 AOC2O75106 756 aa19.41■□□□□ 0.7
SHKBP1-224ENST00000600718 SMPD1P17405 629 aa19.41■□□□□ 0.7
SHKBP1-224ENST00000600718 CYP2B6P20813 491 aa19.41■□□□□ 0.7
SHKBP1-224ENST00000600718 NPTX2P47972 431 aa19.41■□□□□ 0.7
SHKBP1-224ENST00000600718 TERF1P54274 439 aa19.41■□□□□ 0.7
SHKBP1-224ENST00000600718 MAN2A1Q16706 1144 aa19.41■□□□□ 0.7
SHKBP1-224ENST00000600718 CCDC40Q4G0X9 1142 aa19.41■□□□□ 0.7
SHKBP1-224ENST00000600718 GJC2Q5T442 439 aaPredicted RBP19.41■□□□□ 0.7
SHKBP1-224ENST00000600718 CACTINQ8WUQ7 758 aaKnown RBP19.41■□□□□ 0.7
SHKBP1-224ENST00000600718 HVCN1Q96D96 273 aa19.41■□□□□ 0.7
SHKBP1-224ENST00000600718 IFT74Q96LB3 600 aa19.41■□□□□ 0.7
SHKBP1-224ENST00000600718 GBP3Q9H0R5 595 aa19.41■□□□□ 0.7
SHKBP1-224ENST00000600718 KCNF1Q9H3M0 494 aa19.41■□□□□ 0.7
SHKBP1-224ENST00000600718 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.41■□□□□ 0.7
SHKBP1-224ENST00000600718 ZMYM2Q9UBW7 1377 aa19.41■□□□□ 0.7
SHKBP1-224ENST00000600718 CCDC169A6NNP5 214 aa19.41■□□□□ 0.7
SHKBP1-224ENST00000600718 PPFIA4O75335 1185 aa19.41■□□□□ 0.7
SHKBP1-224ENST00000600718 NR3C1P04150 777 aa19.41■□□□□ 0.7
SHKBP1-224ENST00000600718 FCGRTP55899 365 aa19.41■□□□□ 0.7
SHKBP1-224ENST00000600718 PLCB4Q15147 1175 aa19.41■□□□□ 0.7
SHKBP1-224ENST00000600718 SYCP3Q8IZU3 236 aa19.41■□□□□ 0.7
SHKBP1-224ENST00000600718 POLR3FQ9H1D9 316 aaPredicted RBP19.41■□□□□ 0.7
SHKBP1-224ENST00000600718 KMT5AQ9NQR1 393 aa19.41■□□□□ 0.7
SHKBP1-224ENST00000600718 ERAP1Q9NZ08 941 aa19.41■□□□□ 0.7
SHKBP1-224ENST00000600718 FLRT1Q9NZU1 646 aa19.41■□□□□ 0.7
SHKBP1-224ENST00000600718 CGNQ9P2M7 1197 aaKnown RBP19.41■□□□□ 0.7
SHKBP1-224ENST00000600718 ARID2Q68CP9 1835 aa19.4■□□□□ 0.7
SHKBP1-224ENST00000600718 A0A1W2PQC6 194 aa19.4■□□□□ 0.7
SHKBP1-224ENST00000600718 H0YCG3 227 aa19.4■□□□□ 0.7
SHKBP1-224ENST00000600718 PES1O00541 588 aaKnown RBP19.4■□□□□ 0.7
SHKBP1-224ENST00000600718 SLC16A4O15374 487 aa19.4■□□□□ 0.7
SHKBP1-224ENST00000600718 MSNP26038 577 aaKnown RBP19.4■□□□□ 0.7
SHKBP1-224ENST00000600718 ABCD1P33897 745 aa19.4■□□□□ 0.7
SHKBP1-224ENST00000600718 SNRPFP62306 86 aaKnown RBP19.4■□□□□ 0.7
SHKBP1-224ENST00000600718 TNFAIP2Q03169 654 aa19.4■□□□□ 0.7
SHKBP1-224ENST00000600718 PTPN21Q16825 1174 aa19.4■□□□□ 0.7
SHKBP1-224ENST00000600718 VWA3BQ502W6 1294 aa19.4■□□□□ 0.7
SHKBP1-224ENST00000600718 MIIPQ5JXC2 388 aa19.4■□□□□ 0.7
SHKBP1-224ENST00000600718 TRIM50Q86XT4 487 aa19.4■□□□□ 0.7
SHKBP1-224ENST00000600718 KSR1Q8IVT5 923 aa19.4■□□□□ 0.7
SHKBP1-224ENST00000600718 AFG1LQ8WV93 481 aa19.4■□□□□ 0.7
SHKBP1-224ENST00000600718 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.4■□□□□ 0.7
SHKBP1-224ENST00000600718 HBP1O60381 514 aa19.39■□□□□ 0.7
SHKBP1-224ENST00000600718 MAFO75444 373 aaPredicted RBP19.39■□□□□ 0.7
SHKBP1-224ENST00000600718 SCP2P22307 547 aa19.39■□□□□ 0.7
SHKBP1-224ENST00000600718 MARK3P27448 753 aa19.39■□□□□ 0.7
SHKBP1-224ENST00000600718 SOX10P56693 466 aa19.39■□□□□ 0.7
SHKBP1-224ENST00000600718 TBC1D8BQ0IIM8 1120 aa19.39■□□□□ 0.7
SHKBP1-224ENST00000600718 MYBPC2Q14324 1141 aa19.39■□□□□ 0.7
SHKBP1-224ENST00000600718 TMEM161BQ8NDZ6 487 aa19.39■□□□□ 0.7
SHKBP1-224ENST00000600718 BSNDQ8WZ55 320 aa19.39■□□□□ 0.7
SHKBP1-224ENST00000600718 EXOC7Q9UPT5 735 aa19.39■□□□□ 0.7
SHKBP1-224ENST00000600718 MYH11P35749 1972 aa19.39■□□□□ 0.69
SHKBP1-224ENST00000600718 GAS2O43903 313 aaKnown RBP19.39■□□□□ 0.69
SHKBP1-224ENST00000600718 IGHA2P01877 340 aa19.39■□□□□ 0.69
SHKBP1-224ENST00000600718 SFPQP23246 707 aaKnown RBP eCLIP19.39■□□□□ 0.69
SHKBP1-224ENST00000600718 ARL2P36404 184 aa19.39■□□□□ 0.69
SHKBP1-224ENST00000600718 ARID5BQ14865 1188 aa19.39■□□□□ 0.69
SHKBP1-224ENST00000600718 FKBP15Q5T1M5 1219 aa19.39■□□□□ 0.69
SHKBP1-224ENST00000600718 ARMCX5Q6P1M9 558 aa19.39■□□□□ 0.69
SHKBP1-224ENST00000600718 FRMD5Q7Z6J6 570 aa19.39■□□□□ 0.69
SHKBP1-224ENST00000600718 OR6J1Q8NGC5 347 aa19.39■□□□□ 0.69
SHKBP1-224ENST00000600718 NDST4Q9H3R1 872 aa19.39■□□□□ 0.69
SHKBP1-224ENST00000600718 AGPAT3Q9NRZ7 376 aa19.39■□□□□ 0.69
SHKBP1-224ENST00000600718 CLIC2O15247 247 aa19.38■□□□□ 0.69
SHKBP1-224ENST00000600718 SLC16A3O15427 465 aaKnown RBP19.38■□□□□ 0.69
SHKBP1-224ENST00000600718 LGALS2P05162 132 aa19.38■□□□□ 0.69
SHKBP1-224ENST00000600718 ZNF865P0CJ78 1059 aaPredicted RBP19.38■□□□□ 0.69
SHKBP1-224ENST00000600718 CTGFP29279 349 aa19.38■□□□□ 0.69
SHKBP1-224ENST00000600718 PSMC4P43686 418 aa19.38■□□□□ 0.69
SHKBP1-224ENST00000600718 PPP2R5AQ15172 486 aa19.38■□□□□ 0.69
SHKBP1-224ENST00000600718 CCL14Q16627 93 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms