RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 DEXIO95424 95 aa19.81■□□□□ 0.76
SHKBP1-223ENST00000600552 SFNP31947 248 aa19.81■□□□□ 0.76
SHKBP1-223ENST00000600552 ERVFC1P60507 584 aa19.81■□□□□ 0.76
SHKBP1-223ENST00000600552 RBM10P98175 930 aaKnown RBP19.81■□□□□ 0.76
SHKBP1-223ENST00000600552 PLPP4Q5VZY2 271 aa19.81■□□□□ 0.76
SHKBP1-223ENST00000600552 CPLX2Q6PUV4 134 aaKnown RBP19.81■□□□□ 0.76
SHKBP1-223ENST00000600552 EFHBQ8N7U6 833 aa19.81■□□□□ 0.76
SHKBP1-223ENST00000600552 SLKQ9H2G2 1235 aaPredicted RBP19.81■□□□□ 0.76
SHKBP1-223ENST00000600552 TLR9Q9NR96 1032 aa19.81■□□□□ 0.76
SHKBP1-223ENST00000600552 KCNJ14Q9UNX9 436 aa19.81■□□□□ 0.76
SHKBP1-223ENST00000600552 EIF4BP23588 611 aaKnown RBP19.8■□□□□ 0.76
SHKBP1-223ENST00000600552 CA8P35219 290 aa19.8■□□□□ 0.76
SHKBP1-223ENST00000600552 PBX3P40426 434 aa19.8■□□□□ 0.76
SHKBP1-223ENST00000600552 EVCP57679 992 aa19.8■□□□□ 0.76
SHKBP1-223ENST00000600552 FAM189BP81408 668 aa19.8■□□□□ 0.76
SHKBP1-223ENST00000600552 POP1Q99575 1024 aaKnown RBP19.8■□□□□ 0.76
SHKBP1-223ENST00000600552 C22orf23Q9BZE7 217 aa19.8■□□□□ 0.76
SHKBP1-223ENST00000600552 CWH43Q9H720 699 aa19.8■□□□□ 0.76
SHKBP1-223ENST00000600552 CLEC1BQ9P126 229 aa19.8■□□□□ 0.76
SHKBP1-223ENST00000600552 C19orf67A6NJJ6 358 aa19.79■□□□□ 0.76
SHKBP1-223ENST00000600552 LAG3P18627 525 aa19.79■□□□□ 0.76
SHKBP1-223ENST00000600552 GPC3P51654 580 aa19.79■□□□□ 0.76
SHKBP1-223ENST00000600552 DRP2Q13474 957 aa19.79■□□□□ 0.76
SHKBP1-223ENST00000600552 INF2Q27J81 1249 aa19.79■□□□□ 0.76
SHKBP1-223ENST00000600552 LONRF3Q496Y0 759 aa19.79■□□□□ 0.76
SHKBP1-223ENST00000600552 Q4G0T1 1027 aa19.79■□□□□ 0.76
SHKBP1-223ENST00000600552 LLGL2Q6P1M3 1020 aa19.79■□□□□ 0.76
SHKBP1-223ENST00000600552 ECHDC2Q86YB7 292 aa19.79■□□□□ 0.76
SHKBP1-223ENST00000600552 LINC01465Q8N7H1 131 aa19.79■□□□□ 0.76
SHKBP1-223ENST00000600552 ZNF274Q96GC6 653 aaPredicted RBP19.79■□□□□ 0.76
SHKBP1-223ENST00000600552 CASD1Q96PB1 797 aa19.79■□□□□ 0.76
SHKBP1-223ENST00000600552 APOL5Q9BWW9 433 aa19.79■□□□□ 0.76
SHKBP1-223ENST00000600552 TMEM117Q9H0C3 514 aa19.79■□□□□ 0.76
SHKBP1-223ENST00000600552 ELAC1Q9H777 363 aaKnown RBP19.79■□□□□ 0.76
SHKBP1-223ENST00000600552 ENTPD7Q9NQZ7 604 aa19.79■□□□□ 0.76
SHKBP1-223ENST00000600552 MUTYHQ9UIF7 546 aa19.79■□□□□ 0.76
SHKBP1-223ENST00000600552 PRR33A8MZF0 331 aa19.78■□□□□ 0.76
SHKBP1-223ENST00000600552 PSMD10O75832 226 aa19.78■□□□□ 0.76
SHKBP1-223ENST00000600552 DARSP14868 501 aaKnown RBP19.78■□□□□ 0.76
SHKBP1-223ENST00000600552 NONOQ15233 471 aaKnown RBP eCLIP19.78■□□□□ 0.76
SHKBP1-223ENST00000600552 LETM2Q2VYF4 491 aa19.78■□□□□ 0.76
SHKBP1-223ENST00000600552 LRRC55Q6ZSA7 311 aa19.78■□□□□ 0.76
SHKBP1-223ENST00000600552 RNF135Q8IUD6 432 aa19.78■□□□□ 0.76
SHKBP1-223ENST00000600552 HELQQ8TDG4 1101 aa19.78■□□□□ 0.76
SHKBP1-223ENST00000600552 MSLNLQ96KJ4 702 aa19.78■□□□□ 0.76
SHKBP1-223ENST00000600552 RNF19AQ9NV58 838 aa19.78■□□□□ 0.76
SHKBP1-223ENST00000600552 DDX25Q9UHL0 483 aaKnown RBP19.78■□□□□ 0.76
SHKBP1-223ENST00000600552 PUF60Q9UHX1 559 aaKnown RBP19.78■□□□□ 0.76
SHKBP1-223ENST00000600552 HOXA2O43364 376 aa19.77■□□□□ 0.76
SHKBP1-223ENST00000600552 MARCH6O60337 910 aa19.77■□□□□ 0.76
SHKBP1-223ENST00000600552 GLP2RO95838 553 aa19.77■□□□□ 0.76
SHKBP1-223ENST00000600552 DNM2P50570 870 aa19.77■□□□□ 0.76
SHKBP1-223ENST00000600552 UBE3AQ05086 875 aa19.77■□□□□ 0.76
SHKBP1-223ENST00000600552 XKR3Q5GH77 459 aa19.77■□□□□ 0.76
SHKBP1-223ENST00000600552 KCNT2Q6UVM3 1135 aa19.77■□□□□ 0.76
SHKBP1-223ENST00000600552 ZNF558Q96NG5 402 aa19.77■□□□□ 0.76
SHKBP1-223ENST00000600552 GCOM2Q9BZD3 368 aaPredicted RBP19.77■□□□□ 0.76
SHKBP1-223ENST00000600552 USP15Q9Y4E8 981 aaPredicted RBP19.77■□□□□ 0.76
SHKBP1-223ENST00000600552 A0A087WZ62 844 aa19.76■□□□□ 0.75
SHKBP1-223ENST00000600552 CCDC194A0A1B0GVG4 234 aa19.76■□□□□ 0.75
SHKBP1-223ENST00000600552 CLLU1OSQ5K130 101 aa19.76■□□□□ 0.75
SHKBP1-223ENST00000600552 PLA2G4FQ68DD2 849 aa19.76■□□□□ 0.75
SHKBP1-223ENST00000600552 FAM43BQ6ZT52 329 aaPredicted RBP19.76■□□□□ 0.75
SHKBP1-223ENST00000600552 KRT25Q7Z3Z0 450 aa19.76■□□□□ 0.75
SHKBP1-223ENST00000600552 TMC7Q7Z402 723 aa19.76■□□□□ 0.75
SHKBP1-223ENST00000600552 RHPN2Q8IUC4 686 aa19.76■□□□□ 0.75
SHKBP1-223ENST00000600552 MRPS27Q92552 414 aaKnown RBP19.76■□□□□ 0.75
SHKBP1-223ENST00000600552 RPGRIP1Q96KN7 1286 aa19.76■□□□□ 0.75
SHKBP1-223ENST00000600552 TCF25Q9BQ70 676 aa19.76■□□□□ 0.75
SHKBP1-223ENST00000600552 FDXACB1Q9BRP7 624 aaPredicted RBP19.76■□□□□ 0.75
SHKBP1-223ENST00000600552 GJB4Q9NTQ9 266 aa19.76■□□□□ 0.75
SHKBP1-223ENST00000600552 SUCLA2Q9P2R7 463 aaPredicted RBP19.76■□□□□ 0.75
SHKBP1-223ENST00000600552 CYP3A7-CYP3A51PA0A087WV96 503 aa19.75■□□□□ 0.75
SHKBP1-223ENST00000600552 NT5C1B-RDH14C9J2C7 533 aa19.75■□□□□ 0.75
SHKBP1-223ENST00000600552 SLC37A4O43826 429 aa19.75■□□□□ 0.75
SHKBP1-223ENST00000600552 NEFLP07196 543 aa19.75■□□□□ 0.75
SHKBP1-223ENST00000600552 CYP3A7P24462 503 aa19.75■□□□□ 0.75
SHKBP1-223ENST00000600552 TECP42680 631 aa19.75■□□□□ 0.75
SHKBP1-223ENST00000600552 KRT17Q04695 432 aa19.75■□□□□ 0.75
SHKBP1-223ENST00000600552 TARBP2Q15633 366 aaKnown RBP19.75■□□□□ 0.75
SHKBP1-223ENST00000600552 DUSP6Q16828 381 aa19.75■□□□□ 0.75
SHKBP1-223ENST00000600552 KSR1Q8IVT5 923 aa19.75■□□□□ 0.75
SHKBP1-223ENST00000600552 LRRC43Q8N309 656 aa19.75■□□□□ 0.75
SHKBP1-223ENST00000600552 VN1R2Q8NFZ6 395 aa19.75■□□□□ 0.75
SHKBP1-223ENST00000600552 RDM1Q8NG50 284 aa19.75■□□□□ 0.75
SHKBP1-223ENST00000600552 LPPQ93052 612 aa19.75■□□□□ 0.75
SHKBP1-223ENST00000600552 NLRP4Q96MN2 994 aa19.75■□□□□ 0.75
SHKBP1-223ENST00000600552 NIFKQ9BYG3 293 aaKnown RBP19.75■□□□□ 0.75
SHKBP1-223ENST00000600552 TM6SF1Q9BZW5 370 aa19.75■□□□□ 0.75
SHKBP1-223ENST00000600552 BMP2KQ9NSY1 1161 aaPredicted RBP19.75■□□□□ 0.75
SHKBP1-223ENST00000600552 SPG21Q9NZD8 308 aa19.75■□□□□ 0.75
SHKBP1-223ENST00000600552 C5orf42Q9H799 3197 aa19.75■□□□□ 0.75
SHKBP1-223ENST00000600552 HIDE1A8MVS5 230 aa19.74■□□□□ 0.75
SHKBP1-223ENST00000600552 EML1O00423 815 aa19.74■□□□□ 0.75
SHKBP1-223ENST00000600552 EYA4O95677 639 aa19.74■□□□□ 0.75
SHKBP1-223ENST00000600552 SCRN1Q12765 414 aa19.74■□□□□ 0.75
SHKBP1-223ENST00000600552 COASYQ13057 564 aa19.74■□□□□ 0.75
SHKBP1-223ENST00000600552 NPY5RQ15761 445 aa19.74■□□□□ 0.75
SHKBP1-223ENST00000600552 TWF2Q6IBS0 349 aaKnown RBP19.74■□□□□ 0.75
SHKBP1-223ENST00000600552 GALNT17Q6IS24 598 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms