RNA–Protein interactions for RNA: ENST00000598587.1

ARHGEF1-216, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 359 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-216ENST00000598587 USO1O60763 962 aaKnown RBP13.41□□□□□ -0.26
ARHGEF1-216ENST00000598587 EIF4BP23588 611 aaKnown RBP13.41□□□□□ -0.26
ARHGEF1-216ENST00000598587 TXLNAP40222 546 aa13.41□□□□□ -0.26
ARHGEF1-216ENST00000598587 UBA7P41226 1012 aa13.41□□□□□ -0.26
ARHGEF1-216ENST00000598587 NFX1Q12986 1120 aaKnown RBP13.41□□□□□ -0.26
ARHGEF1-216ENST00000598587 ATL3Q6DD88 541 aa13.41□□□□□ -0.26
ARHGEF1-216ENST00000598587 HERC6Q8IVU3 1022 aa13.41□□□□□ -0.26
ARHGEF1-216ENST00000598587 MYOCDQ8IZQ8 938 aa13.41□□□□□ -0.26
ARHGEF1-216ENST00000598587 LRCH3Q96II8 777 aa13.41□□□□□ -0.26
ARHGEF1-216ENST00000598587 NLRP4Q96MN2 994 aa13.41□□□□□ -0.26
ARHGEF1-216ENST00000598587 BMP2KQ9NSY1 1161 aaPredicted RBP13.41□□□□□ -0.26
ARHGEF1-216ENST00000598587 ATP6V1DQ9Y5K8 247 aa13.41□□□□□ -0.26
ARHGEF1-216ENST00000598587 CLIC4Q9Y696 253 aa13.41□□□□□ -0.26
ARHGEF1-216ENST00000598587 MORC2Q9Y6X9 1032 aaPredicted RBP13.41□□□□□ -0.26
ARHGEF1-216ENST00000598587 LAMA2P24043 3122 aaKnown RBP13.41□□□□□ -0.26
ARHGEF1-216ENST00000598587 TTC3P53804 2025 aa13.4□□□□□ -0.26
ARHGEF1-216ENST00000598587 ZBTB39O15060 712 aa13.4□□□□□ -0.26
ARHGEF1-216ENST00000598587 TLL1O43897 1013 aa13.4□□□□□ -0.26
ARHGEF1-216ENST00000598587 DARSP14868 501 aaKnown RBP13.4□□□□□ -0.26
ARHGEF1-216ENST00000598587 ZSCAN20P17040 1043 aaPredicted RBP13.4□□□□□ -0.26
ARHGEF1-216ENST00000598587 PHKA2P46019 1235 aa13.4□□□□□ -0.26
ARHGEF1-216ENST00000598587 DEFB103AP81534 67 aa13.4□□□□□ -0.26
ARHGEF1-216ENST00000598587 CEBPZQ03701 1054 aaKnown RBP13.4□□□□□ -0.26
ARHGEF1-216ENST00000598587 STK38Q15208 465 aa13.4□□□□□ -0.26
ARHGEF1-216ENST00000598587 ZRSR1Q15695 479 aaKnown RBP13.4□□□□□ -0.26
ARHGEF1-216ENST00000598587 IL17AQ16552 155 aa13.4□□□□□ -0.26
ARHGEF1-216ENST00000598587 HYIQ5T013 277 aa13.4□□□□□ -0.26
ARHGEF1-216ENST00000598587 FAM109BQ6ICB4 259 aaPredicted RBP13.4□□□□□ -0.26
ARHGEF1-216ENST00000598587 CABP7Q86V35 215 aa13.4□□□□□ -0.26
ARHGEF1-216ENST00000598587 ZNF579Q8NAF0 562 aaKnown RBP13.4□□□□□ -0.26
ARHGEF1-216ENST00000598587 PRPF31Q8WWY3 499 aaKnown RBP13.4□□□□□ -0.26
ARHGEF1-216ENST00000598587 TMEM143Q96AN5 459 aa13.4□□□□□ -0.26
ARHGEF1-216ENST00000598587 TIFAQ96CG3 184 aa13.4□□□□□ -0.26
ARHGEF1-216ENST00000598587 PBX4Q9BYU1 374 aa13.4□□□□□ -0.26
ARHGEF1-216ENST00000598587 BHMT2Q9H2M3 363 aa13.4□□□□□ -0.26
ARHGEF1-216ENST00000598587 ADAMTS10Q9H324 1103 aa13.4□□□□□ -0.26
ARHGEF1-216ENST00000598587 AGO3Q9H9G7 860 aaKnown RBP13.4□□□□□ -0.26
ARHGEF1-216ENST00000598587 C1orf112Q9NSG2 853 aa13.4□□□□□ -0.26
ARHGEF1-216ENST00000598587 DAXXQ9UER7 740 aaPredicted RBP13.4□□□□□ -0.26
ARHGEF1-216ENST00000598587 CFAP45Q9UL16 551 aa13.4□□□□□ -0.26
ARHGEF1-216ENST00000598587 NOC2LQ9Y3T9 749 aaKnown RBP13.4□□□□□ -0.26
ARHGEF1-216ENST00000598587 TCHHQ07283 1943 aa13.4□□□□□ -0.26
ARHGEF1-216ENST00000598587 LAMA3Q16787 3333 aa13.4□□□□□ -0.26
ARHGEF1-216ENST00000598587 A0A087WZ62 844 aa13.39□□□□□ -0.27
ARHGEF1-216ENST00000598587 PP2D1A8MPX8 630 aa13.39□□□□□ -0.27
ARHGEF1-216ENST00000598587 GJB5O95377 273 aa13.39□□□□□ -0.27
ARHGEF1-216ENST00000598587 EYA4O95677 639 aa13.39□□□□□ -0.27
ARHGEF1-216ENST00000598587 STAG3L1P0CL83 205 aa13.39□□□□□ -0.27
ARHGEF1-216ENST00000598587 NASPP49321 788 aaPredicted RBP13.39□□□□□ -0.27
ARHGEF1-216ENST00000598587 LAMTOR4Q0VGL1 99 aa13.39□□□□□ -0.27
ARHGEF1-216ENST00000598587 MKRN4PQ13434 485 aaPredicted RBP13.39□□□□□ -0.27
ARHGEF1-216ENST00000598587 DRP2Q13474 957 aa13.39□□□□□ -0.27
ARHGEF1-216ENST00000598587 SLC39A14Q15043 492 aa13.39□□□□□ -0.27
ARHGEF1-216ENST00000598587 PCBP1Q15365 356 aaKnown RBP eCLIP13.39□□□□□ -0.27
ARHGEF1-216ENST00000598587 TCTN1Q2MV58 587 aa13.39□□□□□ -0.27
ARHGEF1-216ENST00000598587 FOXD4L5Q5VV16 416 aaPredicted RBP13.39□□□□□ -0.27
ARHGEF1-216ENST00000598587 FAM173BQ6P4H8 233 aa13.39□□□□□ -0.27
ARHGEF1-216ENST00000598587 PADI6Q6TGC4 694 aa13.39□□□□□ -0.27
ARHGEF1-216ENST00000598587 FAM228AQ86W67 206 aa13.39□□□□□ -0.27
ARHGEF1-216ENST00000598587 KRI1Q8N9T8 703 aaKnown RBP13.39□□□□□ -0.27
ARHGEF1-216ENST00000598587 TMEM40Q8WWA1 233 aa13.39□□□□□ -0.27
ARHGEF1-216ENST00000598587 FOXD4L4Q8WXT5 416 aaPredicted RBP13.39□□□□□ -0.27
ARHGEF1-216ENST00000598587 USP28Q96RU2 1077 aa13.39□□□□□ -0.27
ARHGEF1-216ENST00000598587 FDXACB1Q9BRP7 624 aaPredicted RBP13.39□□□□□ -0.27
ARHGEF1-216ENST00000598587 POLR3FQ9H1D9 316 aaPredicted RBP13.39□□□□□ -0.27
ARHGEF1-216ENST00000598587 TSPYL2Q9H2G4 693 aaPredicted RBP13.39□□□□□ -0.27
ARHGEF1-216ENST00000598587 SLC28A3Q9HAS3 691 aa13.39□□□□□ -0.27
ARHGEF1-216ENST00000598587 CDHR5Q9HBB8 845 aa13.39□□□□□ -0.27
ARHGEF1-216ENST00000598587 ERVK-5Q9HDB9 667 aa13.39□□□□□ -0.27
ARHGEF1-216ENST00000598587 ST3GAL5Q9UNP4 418 aa13.39□□□□□ -0.27
ARHGEF1-216ENST00000598587 SRPRBQ9Y5M8 271 aaKnown RBP13.39□□□□□ -0.27
ARHGEF1-216ENST00000598587 FNDC1Q4ZHG4 1894 aaPredicted RBP13.39□□□□□ -0.27
ARHGEF1-216ENST00000598587 KIAA1671Q9BY89 1806 aa13.39□□□□□ -0.27
ARHGEF1-216ENST00000598587 COL4A4P53420 1690 aaPredicted RBP13.38□□□□□ -0.27
ARHGEF1-216ENST00000598587 GRXCR1A8MXD5 290 aa13.38□□□□□ -0.27
ARHGEF1-216ENST00000598587 YEATS4O95619 227 aa13.38□□□□□ -0.27
ARHGEF1-216ENST00000598587 SRGAP2CP0DJJ0 459 aa13.38□□□□□ -0.27
ARHGEF1-216ENST00000598587 MARCKSP29966 332 aaPredicted RBP13.38□□□□□ -0.27
ARHGEF1-216ENST00000598587 CDC25AP30304 524 aa13.38□□□□□ -0.27
ARHGEF1-216ENST00000598587 POU5F1BQ06416 359 aa13.38□□□□□ -0.27
ARHGEF1-216ENST00000598587 NCBP1Q09161 790 aaKnown RBP13.38□□□□□ -0.27
ARHGEF1-216ENST00000598587 PPP2R5AQ15172 486 aa13.38□□□□□ -0.27
ARHGEF1-216ENST00000598587 PTPAQ15257 358 aa13.38□□□□□ -0.27
ARHGEF1-216ENST00000598587 FAM102BQ5T8I3 360 aa13.38□□□□□ -0.27
ARHGEF1-216ENST00000598587 PPP2R2DQ66LE6 453 aa13.38□□□□□ -0.27
ARHGEF1-216ENST00000598587 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.38□□□□□ -0.27
ARHGEF1-216ENST00000598587 SRGAP1Q7Z6B7 1085 aa13.38□□□□□ -0.27
ARHGEF1-216ENST00000598587 RNF149Q8NC42 400 aa13.38□□□□□ -0.27
ARHGEF1-216ENST00000598587 KIFAP3Q92845 792 aa13.38□□□□□ -0.27
ARHGEF1-216ENST00000598587 TOP1MTQ969P6 601 aa13.38□□□□□ -0.27
ARHGEF1-216ENST00000598587 IFT74Q96LB3 600 aa13.38□□□□□ -0.27
ARHGEF1-216ENST00000598587 YME1L1Q96TA2 773 aa13.38□□□□□ -0.27
ARHGEF1-216ENST00000598587 RAD9AQ99638 391 aa13.38□□□□□ -0.27
ARHGEF1-216ENST00000598587 MMTAG2Q9BU76 263 aaKnown RBP13.38□□□□□ -0.27
ARHGEF1-216ENST00000598587 TIPINQ9BVW5 301 aa13.38□□□□□ -0.27
ARHGEF1-216ENST00000598587 OSBPL7Q9BZF2 842 aa13.38□□□□□ -0.27
ARHGEF1-216ENST00000598587 XPNPEP1Q9NQW7 623 aa13.38□□□□□ -0.27
ARHGEF1-216ENST00000598587 DACT1Q9NYF0 836 aa13.38□□□□□ -0.27
ARHGEF1-216ENST00000598587 KCND2Q9NZV8 630 aa13.38□□□□□ -0.27
ARHGEF1-216ENST00000598587 CCDC39Q9UFE4 941 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms