RNA–Protein interactions for RNA: ENST00000597777.1

FARP1-222, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

Gene FARP1, Length 3,841 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-222	ENST00000597777	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	10.69	□□□□□ -0.7
FARP1-222	ENST00000597777	RNF146	Q9NTX7	359 aa		10.69	□□□□□ -0.7
FARP1-222	ENST00000597777	SMCHD1	A6NHR9	2005 aa		10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	GOLGA6C	A6NDK9	693 aa		10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	NFIB	O00712	420 aa		10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	ZBTB39	O15060	712 aa		10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	SPOP	O43791	374 aa		10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	ZRANB2	O95218	330 aa	Known RBP eCLIP	10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	GOLGA6D	P0CG33	693 aa		10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	XRCC5	P13010	732 aa	Known RBP	10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	HNRNPH2	P55795	449 aa	Known RBP	10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	CCDC114	Q96M63	670 aa		10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	LACRT	Q9GZZ8	138 aa		10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	ASCC2	Q9H1I8	757 aa	Predicted RBP	10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	ACAD9	Q9H845	621 aa		10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	EPB41L5	Q9HCM4	733 aa		10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	GOLGA6A	Q9NYA3	693 aa		10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	PASK	Q96RG2	1323 aa		10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	RBAK-RBAKDN	I3L0D1	243 aa		10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	PLA2G4B	P0C869	781 aa		10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	CTNNA2	P26232	953 aa		10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	MUM1L1	Q5H9M0	696 aa		10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	ANKRD23	Q86SG2	305 aa		10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	FAM178B	Q8IXR5	827 aa		10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	FAM20A	Q96MK3	541 aa		10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	NOX5	Q96PH1	765 aa		10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	MMS19	Q96T76	1030 aa		10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	INTS13	Q9NVM9	706 aa		10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	SLC25A27	O95847	323 aa		10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	IFNAR2	P48551	515 aa		10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	KIF11	P52732	1056 aa		10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	HERVK_113	P62684	666 aa		10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	SNX1	Q13596	522 aa		10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	ZNF394	Q53GI3	561 aa		10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	RNF207	Q6ZRF8	634 aa		10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	PEX26	Q7Z412	305 aa		10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	GPR161	Q8N6U8	529 aa	Known RBP	10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	SYTL5	Q8TDW5	730 aa	Predicted RBP	10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	THOC1	Q96FV9	657 aa	Known RBP	10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	MS4A4A	Q96JQ5	239 aa		10.68	□□□□□ -0.7
FARP1-222	ENST00000597777	PFAS	O15067	1338 aa		10.67	□□□□□ -0.7
FARP1-222	ENST00000597777	MYMK	A6NI61	221 aa		10.67	□□□□□ -0.7
FARP1-222	ENST00000597777	EPB41	P11171	864 aa	Known RBP	10.67	□□□□□ -0.7
FARP1-222	ENST00000597777	LIG3	P49916	1009 aa		10.67	□□□□□ -0.7
FARP1-222	ENST00000597777	CST9	Q5W186	159 aa		10.67	□□□□□ -0.7
FARP1-222	ENST00000597777	PCNX4	Q63HM2	1172 aa		10.67	□□□□□ -0.7
FARP1-222	ENST00000597777	SFR1	Q86XK3	245 aa		10.67	□□□□□ -0.7
FARP1-222	ENST00000597777	ETNPPL	Q8TBG4	499 aa		10.67	□□□□□ -0.7
FARP1-222	ENST00000597777	CUEDC2	Q9H467	287 aa		10.67	□□□□□ -0.7
FARP1-222	ENST00000597777	MAGEF1	Q9HAY2	307 aa		10.67	□□□□□ -0.7
FARP1-222	ENST00000597777	MLXIPL	Q9NP71	852 aa		10.67	□□□□□ -0.7
FARP1-222	ENST00000597777	TUBE1	Q9UJT0	475 aa		10.67	□□□□□ -0.7
FARP1-222	ENST00000597777	RSPH10B2	B2RC85	870 aa		10.67	□□□□□ -0.7
FARP1-222	ENST00000597777	ERLIN2	O94905	339 aa		10.67	□□□□□ -0.7
FARP1-222	ENST00000597777	RSPH10B	P0C881	870 aa		10.67	□□□□□ -0.7
FARP1-222	ENST00000597777	BCR	P11274	1271 aa		10.67	□□□□□ -0.7
FARP1-222	ENST00000597777	TNFAIP3	P21580	790 aa		10.67	□□□□□ -0.7
FARP1-222	ENST00000597777	KCNJ6	P48051	423 aa		10.67	□□□□□ -0.7
FARP1-222	ENST00000597777	ERVK-24	P63145	666 aa		10.67	□□□□□ -0.7
FARP1-222	ENST00000597777	DHX9	Q08211	1270 aa	Known RBP	10.67	□□□□□ -0.7
FARP1-222	ENST00000597777	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	10.67	□□□□□ -0.7
FARP1-222	ENST00000597777	LRCH2	Q5VUJ6	765 aa		10.67	□□□□□ -0.7
FARP1-222	ENST00000597777	SPRYD7	Q5W111	196 aa		10.67	□□□□□ -0.7
FARP1-222	ENST00000597777	LENG9	Q96B70	501 aa		10.67	□□□□□ -0.7
FARP1-222	ENST00000597777	ADD3	Q9UEY8	706 aa	Known RBP	10.67	□□□□□ -0.7
FARP1-222	ENST00000597777	CNTRL	Q7Z7A1	2325 aa		10.67	□□□□□ -0.7
FARP1-222	ENST00000597777		K7ENM7	598 aa		10.67	□□□□□ -0.7
FARP1-222	ENST00000597777	NDUFAB1	O14561	156 aa		10.67	□□□□□ -0.7
FARP1-222	ENST00000597777	NMT1	P30419	496 aa	Known RBP	10.67	□□□□□ -0.7
FARP1-222	ENST00000597777	CKAP4	Q07065	602 aa	Known RBP	10.67	□□□□□ -0.7
FARP1-222	ENST00000597777	SH2D3C	Q8N5H7	860 aa		10.67	□□□□□ -0.7
FARP1-222	ENST00000597777	HAS1	Q92839	578 aa		10.67	□□□□□ -0.7
FARP1-222	ENST00000597777	FAM118B	Q9BPY3	351 aa		10.67	□□□□□ -0.7
FARP1-222	ENST00000597777	KCNK9	Q9NPC2	374 aa		10.67	□□□□□ -0.7
FARP1-222	ENST00000597777	NFU1	Q9UMS0	254 aa		10.67	□□□□□ -0.7
FARP1-222	ENST00000597777	FRMD4B	Q9Y2L6	1034 aa		10.67	□□□□□ -0.7
FARP1-222	ENST00000597777	IGLV3-22	A0A075B6J6	115 aa		10.66	□□□□□ -0.7
FARP1-222	ENST00000597777	CALR	P27797	417 aa	Known RBP	10.66	□□□□□ -0.7
FARP1-222	ENST00000597777	CCT5	P48643	541 aa		10.66	□□□□□ -0.7
FARP1-222	ENST00000597777	RPS6	P62753	249 aa	Known RBP	10.66	□□□□□ -0.7
FARP1-222	ENST00000597777	MESD	Q14696	234 aa		10.66	□□□□□ -0.7
FARP1-222	ENST00000597777	CEP85L	Q5SZL2	805 aa		10.66	□□□□□ -0.7
FARP1-222	ENST00000597777	TRIML1	Q8N9V2	468 aa		10.66	□□□□□ -0.7
FARP1-222	ENST00000597777	TRIM9	Q9C026	710 aa		10.66	□□□□□ -0.7
FARP1-222	ENST00000597777	SPATC1L	Q9H0A9	340 aa		10.66	□□□□□ -0.7
FARP1-222	ENST00000597777	RIPK3	Q9Y572	518 aa		10.66	□□□□□ -0.7
FARP1-222	ENST00000597777	LCT	P09848	1927 aa		10.66	□□□□□ -0.7
FARP1-222	ENST00000597777	TMEM150B	A6NC51	233 aa		10.66	□□□□□ -0.7
FARP1-222	ENST00000597777	PPP1R3G	B7ZBB8	358 aa		10.66	□□□□□ -0.7
FARP1-222	ENST00000597777	CNMD	O75829	334 aa		10.66	□□□□□ -0.7
FARP1-222	ENST00000597777	CCNE1	P24864	410 aa		10.66	□□□□□ -0.7
FARP1-222	ENST00000597777	CASP8	Q14790	479 aa		10.66	□□□□□ -0.7
FARP1-222	ENST00000597777	E2F4	Q16254	413 aa		10.66	□□□□□ -0.7
FARP1-222	ENST00000597777	CC2D1A	Q6P1N0	951 aa	Predicted RBP	10.66	□□□□□ -0.7
FARP1-222	ENST00000597777	GSTA5	Q7RTV2	222 aa		10.66	□□□□□ -0.7
FARP1-222	ENST00000597777	REXO1L1P	Q8IX06	675 aa		10.66	□□□□□ -0.7
FARP1-222	ENST00000597777	KCTD17	Q8N5Z5	321 aa		10.66	□□□□□ -0.7
FARP1-222	ENST00000597777	EHBP1	Q8NDI1	1231 aa		10.66	□□□□□ -0.7
FARP1-222	ENST00000597777	SHCBP1	Q8NEM2	672 aa		10.66	□□□□□ -0.7

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