RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 GRIK4Q16099 956 aa16.19■□□□□ 0.18
VRK3-212ENST00000596814 RNF180Q86T96 592 aa16.19■□□□□ 0.18
VRK3-212ENST00000596814 MYOCDQ8IZQ8 938 aa16.19■□□□□ 0.18
VRK3-212ENST00000596814 GUF1Q8N442 669 aaKnown RBP16.19■□□□□ 0.18
VRK3-212ENST00000596814 TMEM143Q96AN5 459 aa16.19■□□□□ 0.18
VRK3-212ENST00000596814 MTG1Q9BT17 334 aaPredicted RBP16.19■□□□□ 0.18
VRK3-212ENST00000596814 C17orf75Q9HAS0 396 aa16.19■□□□□ 0.18
VRK3-212ENST00000596814 IGKV6-21A0A0C4DH24 114 aa16.19■□□□□ 0.18
VRK3-212ENST00000596814 BECN2A8MW95 431 aa16.19■□□□□ 0.18
VRK3-212ENST00000596814 KIF20AO95235 890 aa16.19■□□□□ 0.18
VRK3-212ENST00000596814 C22orf31O95567 290 aa16.19■□□□□ 0.18
VRK3-212ENST00000596814 MYCNP04198 464 aaPredicted RBP16.19■□□□□ 0.18
VRK3-212ENST00000596814 SMIM10L2AP0DMW4 78 aa16.19■□□□□ 0.18
VRK3-212ENST00000596814 SMIM10L2BP0DMW5 78 aa16.19■□□□□ 0.18
VRK3-212ENST00000596814 CASP5P51878 434 aa16.19■□□□□ 0.18
VRK3-212ENST00000596814 LBX1P52954 281 aa16.19■□□□□ 0.18
VRK3-212ENST00000596814 PEX3P56589 373 aa16.19■□□□□ 0.18
VRK3-212ENST00000596814 LRRC41Q15345 812 aa16.19■□□□□ 0.18
VRK3-212ENST00000596814 L1TD1Q5T7N2 865 aaKnown RBP16.19■□□□□ 0.18
VRK3-212ENST00000596814 LUZP1Q86V48 1076 aa16.19■□□□□ 0.18
VRK3-212ENST00000596814 DHX40Q8IX18 779 aaKnown RBP16.19■□□□□ 0.18
VRK3-212ENST00000596814 PCSK9Q8NBP7 692 aaKnown RBP16.19■□□□□ 0.18
VRK3-212ENST00000596814 TCP11Q8WWU5 503 aa16.19■□□□□ 0.18
VRK3-212ENST00000596814 NELFBQ8WX92 580 aa16.19■□□□□ 0.18
VRK3-212ENST00000596814 FIZ1Q96SL8 496 aa16.19■□□□□ 0.18
VRK3-212ENST00000596814 EVPLQ92817 2033 aa16.18■□□□□ 0.18
VRK3-212ENST00000596814 NRCAMQ92823 1304 aa16.18■□□□□ 0.18
VRK3-212ENST00000596814 RRN3P2A6NIE6 340 aa16.18■□□□□ 0.18
VRK3-212ENST00000596814 K7ENM7 598 aa16.18■□□□□ 0.18
VRK3-212ENST00000596814 MAGEB2O15479 319 aa16.18■□□□□ 0.18
VRK3-212ENST00000596814 MYBP10242 640 aa16.18■□□□□ 0.18
VRK3-212ENST00000596814 MAPTP10636 758 aaKnown RBP16.18■□□□□ 0.18
VRK3-212ENST00000596814 NMT1P30419 496 aaKnown RBP16.18■□□□□ 0.18
VRK3-212ENST00000596814 MYL5Q02045 173 aa16.18■□□□□ 0.18
VRK3-212ENST00000596814 KCNA10Q16322 511 aa16.18■□□□□ 0.18
VRK3-212ENST00000596814 LHX8Q68G74 356 aa16.18■□□□□ 0.18
VRK3-212ENST00000596814 CXCL17Q6UXB2 119 aa16.18■□□□□ 0.18
VRK3-212ENST00000596814 STXBP4Q6ZWJ1 553 aa16.18■□□□□ 0.18
VRK3-212ENST00000596814 EPM2AIP1Q7L775 607 aaPredicted RBP16.18■□□□□ 0.18
VRK3-212ENST00000596814 RETREG2Q8NC44 543 aa16.18■□□□□ 0.18
VRK3-212ENST00000596814 SCFD1Q8WVM8 642 aa16.18■□□□□ 0.18
VRK3-212ENST00000596814 DHTKD1Q96HY7 919 aaPredicted RBP16.18■□□□□ 0.18
VRK3-212ENST00000596814 IFT74Q96LB3 600 aa16.18■□□□□ 0.18
VRK3-212ENST00000596814 SUGCTQ9HAC7 445 aa16.18■□□□□ 0.18
VRK3-212ENST00000596814 RWDD2AQ9UIY3 292 aa16.18■□□□□ 0.18
VRK3-212ENST00000596814 UBE4BO95155 1302 aa16.17■□□□□ 0.18
VRK3-212ENST00000596814 SMTNL1A8MU46 457 aa16.17■□□□□ 0.18
VRK3-212ENST00000596814 GOLGA6L19H0YKK7 550 aa16.17■□□□□ 0.18
VRK3-212ENST00000596814 IKBKBO14920 756 aa16.17■□□□□ 0.18
VRK3-212ENST00000596814 EIF3DO15371 548 aaKnown RBP eCLIP16.17■□□□□ 0.18
VRK3-212ENST00000596814 ASGR1P07306 291 aa16.17■□□□□ 0.18
VRK3-212ENST00000596814 ARL2P36404 184 aa16.17■□□□□ 0.18
VRK3-212ENST00000596814 STX17P56962 302 aa16.17■□□□□ 0.18
VRK3-212ENST00000596814 IER5Q5VY09 327 aa16.17■□□□□ 0.18
VRK3-212ENST00000596814 CCSAPQ6IQ19 270 aaPredicted RBP16.17■□□□□ 0.18
VRK3-212ENST00000596814 LRRC71Q8N4P6 559 aa16.17■□□□□ 0.18
VRK3-212ENST00000596814 SLC17A8Q8NDX2 589 aa16.17■□□□□ 0.18
VRK3-212ENST00000596814 LMBR1Q8WVP7 490 aa16.17■□□□□ 0.18
VRK3-212ENST00000596814 BSNDQ8WZ55 320 aa16.17■□□□□ 0.18
VRK3-212ENST00000596814 UNC93B1Q9H1C4 597 aa16.17■□□□□ 0.18
VRK3-212ENST00000596814 GRPEL1Q9HAV7 217 aa16.17■□□□□ 0.18
VRK3-212ENST00000596814 CCDC169A6NNP5 214 aa16.16■□□□□ 0.18
VRK3-212ENST00000596814 GLRA2P23416 452 aa16.16■□□□□ 0.18
VRK3-212ENST00000596814 CCNE1P24864 410 aa16.16■□□□□ 0.18
VRK3-212ENST00000596814 KLRC1P26715 233 aa16.16■□□□□ 0.18
VRK3-212ENST00000596814 NPTX2P47972 431 aa16.16■□□□□ 0.18
VRK3-212ENST00000596814 SMTNP53814 917 aa16.16■□□□□ 0.18
VRK3-212ENST00000596814 NCKAP1LP55160 1127 aa16.16■□□□□ 0.18
VRK3-212ENST00000596814 DRP2Q13474 957 aa16.16■□□□□ 0.18
VRK3-212ENST00000596814 ALCAMQ13740 583 aa16.16■□□□□ 0.18
VRK3-212ENST00000596814 PPP2R5AQ15172 486 aa16.16■□□□□ 0.18
VRK3-212ENST00000596814 BMT2Q1RMZ1 405 aa16.16■□□□□ 0.18
VRK3-212ENST00000596814 EFCAB12Q6NXP0 572 aa16.16■□□□□ 0.18
VRK3-212ENST00000596814 FBXO46Q6PJ61 603 aaPredicted RBP16.16■□□□□ 0.18
VRK3-212ENST00000596814 MTHFD1LQ6UB35 978 aa16.16■□□□□ 0.18
VRK3-212ENST00000596814 ZNF720Q7Z2F6 126 aa16.16■□□□□ 0.18
VRK3-212ENST00000596814 METTL13Q8N6R0 699 aa16.16■□□□□ 0.18
VRK3-212ENST00000596814 ENOX1Q8TC92 643 aaKnown RBP16.16■□□□□ 0.18
VRK3-212ENST00000596814 ASAP3Q8TDY4 903 aa16.16■□□□□ 0.18
VRK3-212ENST00000596814 SPIRE2Q8WWL2 714 aa16.16■□□□□ 0.18
VRK3-212ENST00000596814 PSPC1Q8WXF1 523 aaKnown RBP16.16■□□□□ 0.18
VRK3-212ENST00000596814 P2RX5Q93086 422 aa16.16■□□□□ 0.18
VRK3-212ENST00000596814 ZBTB10Q96DT7 871 aa16.16■□□□□ 0.18
VRK3-212ENST00000596814 KMT5AQ9NQR1 393 aa16.16■□□□□ 0.18
VRK3-212ENST00000596814 SETD4Q9NVD3 440 aa16.16■□□□□ 0.18
VRK3-212ENST00000596814 KCNG1Q9UIX4 513 aa16.16■□□□□ 0.18
VRK3-212ENST00000596814 BICDL2A1A5D9 508 aa16.16■□□□□ 0.18
VRK3-212ENST00000596814 PRPF6O94906 941 aaKnown RBP16.16■□□□□ 0.18
VRK3-212ENST00000596814 NAMPTP43490 491 aa16.16■□□□□ 0.18
VRK3-212ENST00000596814 DNM2P50570 870 aa16.16■□□□□ 0.18
VRK3-212ENST00000596814 CLCN3P51790 818 aa16.16■□□□□ 0.18
VRK3-212ENST00000596814 MKRN4PQ13434 485 aaPredicted RBP16.16■□□□□ 0.18
VRK3-212ENST00000596814 NCAPHQ15003 741 aa16.16■□□□□ 0.18
VRK3-212ENST00000596814 MARCH8Q5T0T0 291 aa16.16■□□□□ 0.18
VRK3-212ENST00000596814 NELFCDQ8IXH7 590 aa16.16■□□□□ 0.18
VRK3-212ENST00000596814 C7orf31Q8N865 590 aa16.16■□□□□ 0.18
VRK3-212ENST00000596814 MED15Q96RN5 788 aa16.16■□□□□ 0.18
VRK3-212ENST00000596814 ST6GALNAC4Q9H4F1 302 aa16.16■□□□□ 0.18
VRK3-212ENST00000596814 PAK6Q9NQU5 681 aaPredicted RBP16.16■□□□□ 0.18
VRK3-212ENST00000596814 PCDHB13Q9Y5F0 798 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms