RNA–Protein interactions for RNA: ENST00000596638.1

SIN3B-208, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 5

Gene SIN3B, Length 1,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-208ENST00000596638 FAM228BP0C875 321 aa9.36□□□□□ -0.91
SIN3B-208ENST00000596638 CYP3A7P24462 503 aa9.36□□□□□ -0.91
SIN3B-208ENST00000596638 IREB2P48200 963 aaKnown RBP9.36□□□□□ -0.91
SIN3B-208ENST00000596638 MRPL12P52815 198 aaKnown RBP9.36□□□□□ -0.91
SIN3B-208ENST00000596638 POLR2FP61218 127 aaKnown RBP9.36□□□□□ -0.91
SIN3B-208ENST00000596638 KLHL30Q0D2K2 578 aa9.36□□□□□ -0.91
SIN3B-208ENST00000596638 NFIAQ12857 509 aa9.36□□□□□ -0.91
SIN3B-208ENST00000596638 KIAA0753Q2KHM9 967 aa9.36□□□□□ -0.91
SIN3B-208ENST00000596638 LACTB2Q53H82 288 aaPredicted RBP9.36□□□□□ -0.91
SIN3B-208ENST00000596638 CDC42EP5Q6NZY7 148 aa9.36□□□□□ -0.91
SIN3B-208ENST00000596638 KCNV1Q6PIU1 500 aa9.36□□□□□ -0.91
SIN3B-208ENST00000596638 MOXD1Q6UVY6 613 aa9.36□□□□□ -0.91
SIN3B-208ENST00000596638 HHIPL2Q6UWX4 724 aa9.36□□□□□ -0.91
SIN3B-208ENST00000596638 OTOP1Q7RTM1 612 aa9.36□□□□□ -0.91
SIN3B-208ENST00000596638 DYMQ7RTS9 669 aa9.36□□□□□ -0.91
SIN3B-208ENST00000596638 IRF2BP2Q7Z5L9 587 aa9.36□□□□□ -0.91
SIN3B-208ENST00000596638 CCDC50Q8IVM0 306 aa9.36□□□□□ -0.91
SIN3B-208ENST00000596638 SYCE1Q8N0S2 351 aa9.36□□□□□ -0.91
SIN3B-208ENST00000596638 ANKRD13CQ8N6S4 541 aa9.36□□□□□ -0.91
SIN3B-208ENST00000596638 LRRC57Q8N9N7 239 aa9.36□□□□□ -0.91
SIN3B-208ENST00000596638 MYCBPAPQ8TBZ2 947 aa9.36□□□□□ -0.91
SIN3B-208ENST00000596638 TBC1D22AQ8WUA7 517 aa9.36□□□□□ -0.91
SIN3B-208ENST00000596638 TGFBRAP1Q8WUH2 860 aa9.36□□□□□ -0.91
SIN3B-208ENST00000596638 IFT81Q8WYA0 676 aa9.36□□□□□ -0.91
SIN3B-208ENST00000596638 TEKT1Q969V4 418 aa9.36□□□□□ -0.91
SIN3B-208ENST00000596638 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.36□□□□□ -0.913e-9■□□□□ 10
SIN3B-208ENST00000596638 TANGO6Q9C0B7 1094 aa9.36□□□□□ -0.91
SIN3B-208ENST00000596638 EHD4Q9H223 541 aa9.36□□□□□ -0.91
SIN3B-208ENST00000596638 KCTD10Q9H3F6 313 aa9.36□□□□□ -0.91
SIN3B-208ENST00000596638 VCPKMTQ9H867 229 aa9.36□□□□□ -0.91
SIN3B-208ENST00000596638 FAM114A2Q9NRY5 505 aa9.36□□□□□ -0.91
SIN3B-208ENST00000596638 EHD2Q9NZN4 543 aa9.36□□□□□ -0.91
SIN3B-208ENST00000596638 SUCLA2Q9P2R7 463 aaPredicted RBP9.36□□□□□ -0.91
SIN3B-208ENST00000596638 BIN2Q9UBW5 565 aaPredicted RBP9.36□□□□□ -0.91
SIN3B-208ENST00000596638 FAM198AQ9UFP1 575 aa9.36□□□□□ -0.91
SIN3B-208ENST00000596638 STX8Q9UNK0 236 aa9.36□□□□□ -0.91
SIN3B-208ENST00000596638 PLAAQ9Y263 795 aa9.36□□□□□ -0.91
SIN3B-208ENST00000596638 DAGLAQ9Y4D2 1042 aa9.36□□□□□ -0.91
SIN3B-208ENST00000596638 SNCAIPQ9Y6H5 919 aa9.36□□□□□ -0.91
SIN3B-208ENST00000596638 PNMA6FA0A0J9YX94 578 aa9.35□□□□□ -0.91
SIN3B-208ENST00000596638 GTPBP10A4D1E9 387 aaKnown RBP9.35□□□□□ -0.91
SIN3B-208ENST00000596638 GMNCA6NCL1 334 aa9.35□□□□□ -0.91
SIN3B-208ENST00000596638 ANKRD65E5RJM6 399 aa9.35□□□□□ -0.91
SIN3B-208ENST00000596638 GCOM1H8Y6P7 765 aaPredicted RBP9.35□□□□□ -0.91
SIN3B-208ENST00000596638 PGRMC1O00264 195 aaKnown RBP9.35□□□□□ -0.91
SIN3B-208ENST00000596638 CHUKO15111 745 aa9.35□□□□□ -0.91
SIN3B-208ENST00000596638 SLC16A3O15427 465 aaKnown RBP9.35□□□□□ -0.91
SIN3B-208ENST00000596638 SLC37A4O43826 429 aa9.35□□□□□ -0.91
SIN3B-208ENST00000596638 MYZAPP0CAP1 466 aa9.35□□□□□ -0.91
SIN3B-208ENST00000596638 GOLGA8HP0CJ92 632 aa9.35□□□□□ -0.91
SIN3B-208ENST00000596638 GHRP10912 638 aa9.35□□□□□ -0.91
SIN3B-208ENST00000596638 PDHBP11177 359 aa9.35□□□□□ -0.91
SIN3B-208ENST00000596638 ECHS1P30084 290 aa9.35□□□□□ -0.91
SIN3B-208ENST00000596638 EIF3BP55884 814 aaKnown RBP9.35□□□□□ -0.91
SIN3B-208ENST00000596638 ERVK-9P63128 1117 aa9.35□□□□□ -0.91
SIN3B-208ENST00000596638 TCP10Q12799 353 aa9.35□□□□□ -0.91
SIN3B-208ENST00000596638 PKN2Q16513 984 aaKnown RBP9.35□□□□□ -0.91
SIN3B-208ENST00000596638 NFIL3Q16649 462 aa9.35□□□□□ -0.91
SIN3B-208ENST00000596638 BMT2Q1RMZ1 405 aa9.35□□□□□ -0.91
SIN3B-208ENST00000596638 FBXO46Q6PJ61 603 aaPredicted RBP9.35□□□□□ -0.91
SIN3B-208ENST00000596638 SH3BP5LQ7L8J4 393 aa9.35□□□□□ -0.91
SIN3B-208ENST00000596638 KCNK18Q7Z418 384 aa9.35□□□□□ -0.91
SIN3B-208ENST00000596638 MAATS1Q7Z4T9 603 aa9.35□□□□□ -0.91
SIN3B-208ENST00000596638 CROCCP2Q86T23 111 aa9.35□□□□□ -0.91
SIN3B-208ENST00000596638 FMNL3Q8IVF7 1028 aa9.35□□□□□ -0.91
SIN3B-208ENST00000596638 CCDC26Q8TAB7 109 aa9.35□□□□□ -0.91
SIN3B-208ENST00000596638 CD99L2Q8TCZ2 262 aa9.35□□□□□ -0.91
SIN3B-208ENST00000596638 EEF2KMTQ96G04 330 aa9.35□□□□□ -0.91
SIN3B-208ENST00000596638 CDK5RAP2Q96SN8 1893 aa9.35□□□□□ -0.91
SIN3B-208ENST00000596638 NUDT12Q9BQG2 462 aa9.35□□□□□ -0.91
SIN3B-208ENST00000596638 CNOT10Q9H9A5 744 aaKnown RBP9.35□□□□□ -0.91
SIN3B-208ENST00000596638 METTL14Q9HCE5 456 aaKnown RBP9.35□□□□□ -0.91
SIN3B-208ENST00000596638 NLRC4Q9NPP4 1024 aa9.35□□□□□ -0.91
SIN3B-208ENST00000596638 EMILIN3Q9NT22 766 aa9.35□□□□□ -0.91
SIN3B-208ENST00000596638 TMEM260Q9NX78 707 aa9.35□□□□□ -0.91
SIN3B-208ENST00000596638 SMARCAL1Q9NZC9 954 aa9.35□□□□□ -0.91
SIN3B-208ENST00000596638 SLC12A6Q9UHW9 1150 aa9.35□□□□□ -0.91
SIN3B-208ENST00000596638 TRAF3IP3Q9Y228 551 aa9.35□□□□□ -0.91
SIN3B-208ENST00000596638 SAMM50Q9Y512 469 aa9.35□□□□□ -0.91
SIN3B-208ENST00000596638 TRIM17Q9Y577 477 aa9.35□□□□□ -0.91
SIN3B-208ENST00000596638 CAPN7Q9Y6W3 813 aa9.35□□□□□ -0.91
SIN3B-208ENST00000596638 GAKO14976 1311 aa9.34□□□□□ -0.91
SIN3B-208ENST00000596638 GOLGA6L7A0A1B0GV03 622 aa9.34□□□□□ -0.91
SIN3B-208ENST00000596638 POTEFA5A3E0 1075 aa9.34□□□□□ -0.91
SIN3B-208ENST00000596638 USP17L5A8MUK1 530 aa9.34□□□□□ -0.91
SIN3B-208ENST00000596638 TMCO5BA8MYB1 307 aa9.34□□□□□ -0.91
SIN3B-208ENST00000596638 IRF6O14896 467 aa9.34□□□□□ -0.91
SIN3B-208ENST00000596638 TRAPPC3O43617 180 aa9.34□□□□□ -0.91
SIN3B-208ENST00000596638 RASSF9O75901 435 aa9.34□□□□□ -0.91
SIN3B-208ENST00000596638 FLOT1O75955 427 aa9.34□□□□□ -0.91
SIN3B-208ENST00000596638 TDP2O95551 362 aa9.34□□□□□ -0.91
SIN3B-208ENST00000596638 FTCDO95954 541 aa9.34□□□□□ -0.91
SIN3B-208ENST00000596638 ALDH1A1P00352 501 aa9.34□□□□□ -0.91
SIN3B-208ENST00000596638 KRT14P02533 472 aa9.34□□□□□ -0.91
SIN3B-208ENST00000596638 PLA2G4BP0C869 781 aa9.34□□□□□ -0.91
SIN3B-208ENST00000596638 CTGFP29279 349 aa9.34□□□□□ -0.91
SIN3B-208ENST00000596638 HSD17B3P37058 310 aa9.34□□□□□ -0.91
SIN3B-208ENST00000596638 ATP1A2P50993 1020 aa9.34□□□□□ -0.91
SIN3B-208ENST00000596638 CDR1P51861 262 aa9.34□□□□□ -0.91
SIN3B-208ENST00000596638 PPP2R2AP63151 447 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms