RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 TMEM119Q4V9L6 283 aa15.97■□□□□ 0.15
LIG1-208ENST00000595758 PLEKHG4Q58EX7 1191 aa15.97■□□□□ 0.15
LIG1-208ENST00000595758 TSHZ1Q6ZSZ6 1077 aa15.97■□□□□ 0.15
LIG1-208ENST00000595758 KCNK18Q7Z418 384 aa15.97■□□□□ 0.15
LIG1-208ENST00000595758 RHPN2Q8IUC4 686 aa15.97■□□□□ 0.15
LIG1-208ENST00000595758 USP38Q8NB14 1042 aa15.97■□□□□ 0.15
LIG1-208ENST00000595758 DBF4BQ8NFT6 615 aa15.97■□□□□ 0.15
LIG1-208ENST00000595758 PRPF31Q8WWY3 499 aaKnown RBP15.97■□□□□ 0.15
LIG1-208ENST00000595758 NLRP7Q8WX94 980 aa15.97■□□□□ 0.15
LIG1-208ENST00000595758 PSPC1Q8WXF1 523 aaKnown RBP15.97■□□□□ 0.15
LIG1-208ENST00000595758 SYMPKQ92797 1274 aaKnown RBP15.97■□□□□ 0.15
LIG1-208ENST00000595758 CHAMP1Q96JM3 812 aa15.97■□□□□ 0.15
LIG1-208ENST00000595758 SCLT1Q96NL6 688 aa15.97■□□□□ 0.15
LIG1-208ENST00000595758 OSMRQ99650 979 aa15.97■□□□□ 0.15
LIG1-208ENST00000595758 IFIH1Q9BYX4 1025 aaKnown RBP15.97■□□□□ 0.15
LIG1-208ENST00000595758 CIZ1Q9ULV3 898 aaPredicted RBP15.97■□□□□ 0.15
LIG1-208ENST00000595758 RBM19Q9Y4C8 960 aaKnown RBP15.97■□□□□ 0.15
LIG1-208ENST00000595758 MYH15Q9Y2K3 1946 aa15.97■□□□□ 0.15
LIG1-208ENST00000595758 RBAK-RBAKDNI3L0D1 243 aa15.96■□□□□ 0.15
LIG1-208ENST00000595758 ASAP2O43150 1006 aa15.96■□□□□ 0.15
LIG1-208ENST00000595758 CUTAO60888 179 aa15.96■□□□□ 0.15
LIG1-208ENST00000595758 TXLNAP40222 546 aa15.96■□□□□ 0.15
LIG1-208ENST00000595758 ME1P48163 572 aa15.96■□□□□ 0.15
LIG1-208ENST00000595758 GPC3P51654 580 aa15.96■□□□□ 0.15
LIG1-208ENST00000595758 LAMTOR4Q0VGL1 99 aa15.96■□□□□ 0.15
LIG1-208ENST00000595758 IKBKEQ14164 716 aa15.96■□□□□ 0.15
LIG1-208ENST00000595758 KARSQ15046 597 aaKnown RBP15.96■□□□□ 0.15
LIG1-208ENST00000595758 TCTN1Q2MV58 587 aa15.96■□□□□ 0.15
LIG1-208ENST00000595758 MAEAQ7L5Y9 396 aa15.96■□□□□ 0.15
LIG1-208ENST00000595758 MCPH1Q8NEM0 835 aa15.96■□□□□ 0.15
LIG1-208ENST00000595758 TET1Q8NFU7 2136 aa15.96■□□□□ 0.15
LIG1-208ENST00000595758 ZNF668Q96K58 619 aaPredicted RBP15.96■□□□□ 0.15
LIG1-208ENST00000595758 AGO3Q9H9G7 860 aaKnown RBP15.96■□□□□ 0.15
LIG1-208ENST00000595758 TSHZ2Q9NRE2 1034 aa15.96■□□□□ 0.15
LIG1-208ENST00000595758 CCDC39Q9UFE4 941 aa15.96■□□□□ 0.15
LIG1-208ENST00000595758 COL4A3BPQ9Y5P4 624 aa15.96■□□□□ 0.15
LIG1-208ENST00000595758 ABHD14A-ACY1A0A1B0GW23 586 aa15.95■□□□□ 0.14
LIG1-208ENST00000595758 ZBBXA8MT70 800 aa15.95■□□□□ 0.14
LIG1-208ENST00000595758 RPS6KA5O75582 802 aa15.95■□□□□ 0.14
LIG1-208ENST00000595758 BAIAP3O94812 1187 aa15.95■□□□□ 0.14
LIG1-208ENST00000595758 SSBP05455 408 aaKnown RBP eCLIP15.95■□□□□ 0.14
LIG1-208ENST00000595758 PLA2G4BP0C869 781 aa15.95■□□□□ 0.14
LIG1-208ENST00000595758 PLCG1P19174 1290 aa15.95■□□□□ 0.14
LIG1-208ENST00000595758 CD52P31358 61 aa15.95■□□□□ 0.14
LIG1-208ENST00000595758 ARL2P36404 184 aa15.95■□□□□ 0.14
LIG1-208ENST00000595758 PAK2Q13177 524 aa15.95■□□□□ 0.14
LIG1-208ENST00000595758 MXD4Q14582 209 aaPredicted RBP15.95■□□□□ 0.14
LIG1-208ENST00000595758 FAM102BQ5T8I3 360 aa15.95■□□□□ 0.14
LIG1-208ENST00000595758 RASIP1Q5U651 963 aa15.95■□□□□ 0.14
LIG1-208ENST00000595758 ZNF410Q86VK4 478 aa15.95■□□□□ 0.14
LIG1-208ENST00000595758 KSR1Q8IVT5 923 aa15.95■□□□□ 0.14
LIG1-208ENST00000595758 LEO1Q8WVC0 666 aaPredicted RBP15.95■□□□□ 0.14
LIG1-208ENST00000595758 APBB2Q92870 758 aa15.95■□□□□ 0.14
LIG1-208ENST00000595758 SPATA32Q96LK8 384 aa15.95■□□□□ 0.14
LIG1-208ENST00000595758 NLRP4Q96MN2 994 aa15.95■□□□□ 0.14
LIG1-208ENST00000595758 GCOM2Q9BZD3 368 aaPredicted RBP15.95■□□□□ 0.14
LIG1-208ENST00000595758 POLR3FQ9H1D9 316 aaPredicted RBP15.95■□□□□ 0.14
LIG1-208ENST00000595758 CXXC1Q9P0U4 656 aaPredicted RBP15.95■□□□□ 0.14
LIG1-208ENST00000595758 PADI3Q9ULW8 664 aa15.95■□□□□ 0.14
LIG1-208ENST00000595758 PCDHA7Q9UN72 937 aa15.95■□□□□ 0.14
LIG1-208ENST00000595758 NOC2LQ9Y3T9 749 aaKnown RBP15.95■□□□□ 0.14
LIG1-208ENST00000595758 A0A087WZ62 844 aa15.94■□□□□ 0.14
LIG1-208ENST00000595758 EFCAB14O75071 495 aa15.94■□□□□ 0.14
LIG1-208ENST00000595758 SRGAP2CP0DJJ0 459 aa15.94■□□□□ 0.14
LIG1-208ENST00000595758 DARSP14868 501 aaKnown RBP15.94■□□□□ 0.14
LIG1-208ENST00000595758 EIF4BP23588 611 aaKnown RBP15.94■□□□□ 0.14
LIG1-208ENST00000595758 ODR4Q5SWX8 454 aa15.94■□□□□ 0.14
LIG1-208ENST00000595758 AXDND1Q5T1B0 1012 aaPredicted RBP15.94■□□□□ 0.14
LIG1-208ENST00000595758 RRAGBQ5VZM2 374 aa15.94■□□□□ 0.14
LIG1-208ENST00000595758 ASAP3Q8TDY4 903 aa15.94■□□□□ 0.14
LIG1-208ENST00000595758 TMEM40Q8WWA1 233 aa15.94■□□□□ 0.14
LIG1-208ENST00000595758 FDXACB1Q9BRP7 624 aaPredicted RBP15.94■□□□□ 0.14
LIG1-208ENST00000595758 SCAND2PQ9GZW5 306 aaPredicted RBP15.94■□□□□ 0.14
LIG1-208ENST00000595758 GPRC5CQ9NQ84 441 aa15.94■□□□□ 0.14
LIG1-208ENST00000595758 SLC4A7Q9Y6M7 1214 aa15.94■□□□□ 0.14
LIG1-208ENST00000595758 ARID2Q68CP9 1835 aa15.94■□□□□ 0.14
LIG1-208ENST00000595758 GPR182O15218 404 aa15.93■□□□□ 0.14
LIG1-208ENST00000595758 KCNJ6P48051 423 aa15.93■□□□□ 0.14
LIG1-208ENST00000595758 NFX1Q12986 1120 aaKnown RBP15.93■□□□□ 0.14
LIG1-208ENST00000595758 TFDP1Q14186 410 aa15.93■□□□□ 0.14
LIG1-208ENST00000595758 HABP4Q5JVS0 413 aaKnown RBP15.93■□□□□ 0.14
LIG1-208ENST00000595758 RINT1Q6NUQ1 792 aa15.93■□□□□ 0.14
LIG1-208ENST00000595758 CCDC73Q6ZRK6 1079 aa15.93■□□□□ 0.14
LIG1-208ENST00000595758 C1orf186Q6ZWK4 172 aa15.93■□□□□ 0.14
LIG1-208ENST00000595758 SYT2Q8N9I0 419 aaPredicted RBP15.93■□□□□ 0.14
LIG1-208ENST00000595758 RNF149Q8NC42 400 aa15.93■□□□□ 0.14
LIG1-208ENST00000595758 RAD54LQ92698 747 aa15.93■□□□□ 0.14
LIG1-208ENST00000595758 RUSC1Q9BVN2 902 aa15.93■□□□□ 0.14
LIG1-208ENST00000595758 PANK2Q9BZ23 570 aa15.93■□□□□ 0.14
LIG1-208ENST00000595758 INO80BQ9C086 356 aaPredicted RBP15.93■□□□□ 0.14
LIG1-208ENST00000595758 ERVK-5Q9HDB9 667 aa15.93■□□□□ 0.14
LIG1-208ENST00000595758 BLOC1S4Q9NUP1 217 aa15.93■□□□□ 0.14
LIG1-208ENST00000595758 ST3GAL5Q9UNP4 418 aa15.93■□□□□ 0.14
LIG1-208ENST00000595758 RANBP2P49792 3224 aaKnown RBP15.92■□□□□ 0.14
LIG1-208ENST00000595758 CSDE1O75534 798 aaKnown RBP15.92■□□□□ 0.14
LIG1-208ENST00000595758 GLRA2P23416 452 aa15.92■□□□□ 0.14
LIG1-208ENST00000595758 SLC12A3P55017 1021 aa15.92■□□□□ 0.14
LIG1-208ENST00000595758 WDR5P61964 334 aaKnown RBP15.92■□□□□ 0.14
LIG1-208ENST00000595758 LRIT3Q3SXY7 679 aa15.92■□□□□ 0.14
LIG1-208ENST00000595758 SHC4Q6S5L8 630 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms