RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 DBR1Q9UK59 544 aaKnown RBP15.36■□□□□ 0.05
SHKBP1-207ENST00000595631 A0A087WZ62 844 aa15.35■□□□□ 0.05
SHKBP1-207ENST00000595631 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.35■□□□□ 0.05
SHKBP1-207ENST00000595631 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.35■□□□□ 0.05
SHKBP1-207ENST00000595631 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.35■□□□□ 0.05
SHKBP1-207ENST00000595631 RPS6KA5O75582 802 aa15.35■□□□□ 0.05
SHKBP1-207ENST00000595631 BRD1O95696 1058 aa15.35■□□□□ 0.05
SHKBP1-207ENST00000595631 XRCC6P12956 609 aaKnown RBP eCLIP15.35■□□□□ 0.05
SHKBP1-207ENST00000595631 MYOGP15173 224 aa15.35■□□□□ 0.05
SHKBP1-207ENST00000595631 ATP2A2P16615 1042 aaKnown RBP15.35■□□□□ 0.05
SHKBP1-207ENST00000595631 KCNJ6P48051 423 aa15.35■□□□□ 0.05
SHKBP1-207ENST00000595631 NASPP49321 788 aaPredicted RBP15.35■□□□□ 0.05
SHKBP1-207ENST00000595631 DNM2P50570 870 aa15.35■□□□□ 0.05
SHKBP1-207ENST00000595631 NFX1Q12986 1120 aaKnown RBP15.35■□□□□ 0.05
SHKBP1-207ENST00000595631 FAM117BQ6P1L5 589 aa15.35■□□□□ 0.05
SHKBP1-207ENST00000595631 USP49Q70CQ1 688 aa15.35■□□□□ 0.05
SHKBP1-207ENST00000595631 CABP7Q86V35 215 aa15.35■□□□□ 0.05
SHKBP1-207ENST00000595631 ASAP3Q8TDY4 903 aa15.35■□□□□ 0.05
SHKBP1-207ENST00000595631 LRRC15Q8TF66 581 aa15.35■□□□□ 0.05
SHKBP1-207ENST00000595631 PRPF31Q8WWY3 499 aaKnown RBP15.35■□□□□ 0.05
SHKBP1-207ENST00000595631 NLRP7Q8WX94 980 aa15.35■□□□□ 0.05
SHKBP1-207ENST00000595631 JPH2Q9BR39 696 aaPredicted RBP15.35■□□□□ 0.05
SHKBP1-207ENST00000595631 FDXACB1Q9BRP7 624 aaPredicted RBP15.35■□□□□ 0.05
SHKBP1-207ENST00000595631 CSRNP2Q9H175 543 aa15.35■□□□□ 0.05
SHKBP1-207ENST00000595631 BHMT2Q9H2M3 363 aa15.35■□□□□ 0.05
SHKBP1-207ENST00000595631 TMX1Q9H3N1 280 aa15.35■□□□□ 0.05
SHKBP1-207ENST00000595631 ATP6V0A4Q9HBG4 840 aa15.35■□□□□ 0.05
SHKBP1-207ENST00000595631 POLD4Q9HCU8 107 aa15.35■□□□□ 0.05
SHKBP1-207ENST00000595631 ERVK-5Q9HDB9 667 aa15.35■□□□□ 0.05
SHKBP1-207ENST00000595631 GPRC5CQ9NQ84 441 aa15.35■□□□□ 0.05
SHKBP1-207ENST00000595631 PPME1Q9Y570 386 aa15.35■□□□□ 0.05
SHKBP1-207ENST00000595631 COL4A3BPQ9Y5P4 624 aa15.35■□□□□ 0.05
SHKBP1-207ENST00000595631 SQORQ9Y6N5 450 aa15.35■□□□□ 0.05
SHKBP1-207ENST00000595631 FNDC1Q4ZHG4 1894 aaPredicted RBP15.35■□□□□ 0.05
SHKBP1-207ENST00000595631 ARHGEF35A5YM69 484 aa15.34■□□□□ 0.05
SHKBP1-207ENST00000595631 MGEA5O60502 916 aa15.34■□□□□ 0.05
SHKBP1-207ENST00000595631 DGAT1O75907 488 aa15.34■□□□□ 0.05
SHKBP1-207ENST00000595631 MUTP22033 750 aa15.34■□□□□ 0.05
SHKBP1-207ENST00000595631 SMAD3P84022 425 aaKnown RBP15.34■□□□□ 0.05
SHKBP1-207ENST00000595631 SLC39A14Q15043 492 aa15.34■□□□□ 0.05
SHKBP1-207ENST00000595631 STK38Q15208 465 aa15.34■□□□□ 0.05
SHKBP1-207ENST00000595631 PADI6Q6TGC4 694 aa15.34■□□□□ 0.05
SHKBP1-207ENST00000595631 RTN4RL1Q86UN2 441 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-207ENST00000595631 USP38Q8NB14 1042 aa15.34■□□□□ 0.05
SHKBP1-207ENST00000595631 PSPC1Q8WXF1 523 aaKnown RBP15.34■□□□□ 0.05
SHKBP1-207ENST00000595631 APBB2Q92870 758 aa15.34■□□□□ 0.05
SHKBP1-207ENST00000595631 ZNF396Q96N95 335 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-207ENST00000595631 SLC9A7Q96T83 725 aa15.34■□□□□ 0.05
SHKBP1-207ENST00000595631 PBX4Q9BYU1 374 aa15.34■□□□□ 0.05
SHKBP1-207ENST00000595631 POLR3FQ9H1D9 316 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-207ENST00000595631 ST3GAL5Q9UNP4 418 aa15.34■□□□□ 0.05
SHKBP1-207ENST00000595631 YBX2Q9Y2T7 364 aaKnown RBP15.34■□□□□ 0.05
SHKBP1-207ENST00000595631 STK24Q9Y6E0 443 aa15.34■□□□□ 0.05
SHKBP1-207ENST00000595631 COL4A6Q14031 1691 aa15.34■□□□□ 0.05
SHKBP1-207ENST00000595631 LAMA3Q16787 3333 aa15.33■□□□□ 0.04
SHKBP1-207ENST00000595631 EYA4O95677 639 aa15.33■□□□□ 0.04
SHKBP1-207ENST00000595631 SRGAP2CP0DJJ0 459 aa15.33■□□□□ 0.04
SHKBP1-207ENST00000595631 PDIA4P13667 645 aaKnown RBP15.33■□□□□ 0.04
SHKBP1-207ENST00000595631 DARSP14868 501 aaKnown RBP15.33■□□□□ 0.04
SHKBP1-207ENST00000595631 IBSPP21815 317 aaPredicted RBP15.33■□□□□ 0.04
SHKBP1-207ENST00000595631 LONP1P36776 959 aaKnown RBP15.33■□□□□ 0.04
SHKBP1-207ENST00000595631 DNM1Q05193 864 aaKnown RBP15.33■□□□□ 0.04
SHKBP1-207ENST00000595631 LAMTOR4Q0VGL1 99 aa15.33■□□□□ 0.04
SHKBP1-207ENST00000595631 KARSQ15046 597 aaKnown RBP15.33■□□□□ 0.04
SHKBP1-207ENST00000595631 TMEM119Q4V9L6 283 aa15.33■□□□□ 0.04
SHKBP1-207ENST00000595631 HYIQ5T013 277 aa15.33■□□□□ 0.04
SHKBP1-207ENST00000595631 Q7L0L9 218 aa15.33■□□□□ 0.04
SHKBP1-207ENST00000595631 HERC6Q8IVU3 1022 aa15.33■□□□□ 0.04
SHKBP1-207ENST00000595631 MYOCDQ8IZQ8 938 aa15.33■□□□□ 0.04
SHKBP1-207ENST00000595631 LINC00301Q8NCQ3 95 aa15.33■□□□□ 0.04
SHKBP1-207ENST00000595631 TCP11Q8WWU5 503 aa15.33■□□□□ 0.04
SHKBP1-207ENST00000595631 EPSTI1Q96J88 318 aa15.33■□□□□ 0.04
SHKBP1-207ENST00000595631 AK8Q96MA6 479 aa15.33■□□□□ 0.04
SHKBP1-207ENST00000595631 SRPRBQ9Y5M8 271 aaKnown RBP15.33■□□□□ 0.04
SHKBP1-207ENST00000595631 COL4A4P53420 1690 aaPredicted RBP15.32■□□□□ 0.04
SHKBP1-207ENST00000595631 ENPP3O14638 875 aa15.32■□□□□ 0.04
SHKBP1-207ENST00000595631 GAS2O43903 313 aaKnown RBP15.32■□□□□ 0.04
SHKBP1-207ENST00000595631 EFCAB14O75071 495 aa15.32■□□□□ 0.04
SHKBP1-207ENST00000595631 UPP2O95045 317 aa15.32■□□□□ 0.04
SHKBP1-207ENST00000595631 GLRA2P23416 452 aa15.32■□□□□ 0.04
SHKBP1-207ENST00000595631 EIF4BP23588 611 aaKnown RBP15.32■□□□□ 0.04
SHKBP1-207ENST00000595631 DNAJB2P25686 324 aa15.32■□□□□ 0.04
SHKBP1-207ENST00000595631 ARL2P36404 184 aa15.32■□□□□ 0.04
SHKBP1-207ENST00000595631 UBA7P41226 1012 aa15.32■□□□□ 0.04
SHKBP1-207ENST00000595631 FAM102BQ5T8I3 360 aa15.32■□□□□ 0.04
SHKBP1-207ENST00000595631 ZNF410Q86VK4 478 aa15.32■□□□□ 0.04
SHKBP1-207ENST00000595631 EXOC8Q8IYI6 725 aa15.32■□□□□ 0.04
SHKBP1-207ENST00000595631 SYMPKQ92797 1274 aaKnown RBP15.32■□□□□ 0.04
SHKBP1-207ENST00000595631 CDK5RAP3Q96JB5 506 aa15.32■□□□□ 0.04
SHKBP1-207ENST00000595631 RUSC1Q9BVN2 902 aa15.32■□□□□ 0.04
SHKBP1-207ENST00000595631 GCOM2Q9BZD3 368 aaPredicted RBP15.32■□□□□ 0.04
SHKBP1-207ENST00000595631 NKX2-4Q9H2Z4 354 aa15.32■□□□□ 0.04
SHKBP1-207ENST00000595631 MINDY3Q9H8M7 445 aa15.32■□□□□ 0.04
SHKBP1-207ENST00000595631 IFT122Q9HBG6 1241 aa15.32■□□□□ 0.04
SHKBP1-207ENST00000595631 DNM3Q9UQ16 869 aa15.32■□□□□ 0.04
SHKBP1-207ENST00000595631 RALGAPA2Q2PPJ7 1873 aa15.31■□□□□ 0.04
SHKBP1-207ENST00000595631 SPTLC2O15270 562 aa15.31■□□□□ 0.04
SHKBP1-207ENST00000595631 ARHGEF15O94989 841 aa15.31■□□□□ 0.04
SHKBP1-207ENST00000595631 AMHP03971 560 aa15.31■□□□□ 0.04
SHKBP1-207ENST00000595631 SSBP05455 408 aaKnown RBP eCLIP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms