RNA–Protein interactions for RNA: ENST00000595560.1

ZNF550-207, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-207ENST00000595560 NLRP7Q8WX94 980 aa17.66■□□□□ 0.42
ZNF550-207ENST00000595560 ZNF689Q96CS4 500 aaPredicted RBP17.66■□□□□ 0.42
ZNF550-207ENST00000595560 SCLT1Q96NL6 688 aa17.66■□□□□ 0.42
ZNF550-207ENST00000595560 C17orf80Q9BSJ5 609 aa17.66■□□□□ 0.42
ZNF550-207ENST00000595560 DHX33Q9H6R0 707 aaKnown RBP17.66■□□□□ 0.42
ZNF550-207ENST00000595560 RGS18Q9NS28 235 aa17.66■□□□□ 0.42
ZNF550-207ENST00000595560 C1orf112Q9NSG2 853 aa17.66■□□□□ 0.42
ZNF550-207ENST00000595560 MTUS1Q9ULD2 1270 aa17.66■□□□□ 0.42
ZNF550-207ENST00000595560 MTCH2Q9Y6C9 303 aa17.66■□□□□ 0.42
ZNF550-207ENST00000595560 FNDC1Q4ZHG4 1894 aaPredicted RBP17.66■□□□□ 0.42
ZNF550-207ENST00000595560 DENND3A2RUS2 1198 aa17.65■□□□□ 0.42
ZNF550-207ENST00000595560 POTEMA6NI47 508 aa17.65■□□□□ 0.42
ZNF550-207ENST00000595560 GAS2O43903 313 aaKnown RBP17.65■□□□□ 0.42
ZNF550-207ENST00000595560 GJB2P29033 226 aa17.65■□□□□ 0.42
ZNF550-207ENST00000595560 SARSP49591 514 aaKnown RBP17.65■□□□□ 0.42
ZNF550-207ENST00000595560 POLGP54098 1239 aaPredicted RBP17.65■□□□□ 0.42
ZNF550-207ENST00000595560 ZNF174Q15697 407 aa17.65■□□□□ 0.42
ZNF550-207ENST00000595560 SLC24A5Q71RS6 500 aa17.65■□□□□ 0.42
ZNF550-207ENST00000595560 ZNF410Q86VK4 478 aa17.65■□□□□ 0.42
ZNF550-207ENST00000595560 FIBCD1Q8N539 461 aa17.65■□□□□ 0.42
ZNF550-207ENST00000595560 ZNF579Q8NAF0 562 aaKnown RBP17.65■□□□□ 0.42
ZNF550-207ENST00000595560 FBXO22Q8NEZ5 403 aa17.65■□□□□ 0.42
ZNF550-207ENST00000595560 GDPD5Q8WTR4 605 aa17.65■□□□□ 0.42
ZNF550-207ENST00000595560 ADAM2Q99965 735 aa17.65■□□□□ 0.42
ZNF550-207ENST00000595560 RNF216Q9NWF9 866 aaPredicted RBP17.65■□□□□ 0.42
ZNF550-207ENST00000595560 SUCLA2Q9P2R7 463 aaPredicted RBP17.65■□□□□ 0.42
ZNF550-207ENST00000595560 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.65■□□□□ 0.42
ZNF550-207ENST00000595560 C9IYK1 514 aa17.64■□□□□ 0.41
ZNF550-207ENST00000595560 DSC3Q14574 896 aa17.64■□□□□ 0.41
ZNF550-207ENST00000595560 EPC2Q52LR7 807 aa17.64■□□□□ 0.41
ZNF550-207ENST00000595560 XKR9Q5GH70 373 aa17.64■□□□□ 0.41
ZNF550-207ENST00000595560 ZNF668Q96K58 619 aaPredicted RBP17.64■□□□□ 0.41
ZNF550-207ENST00000595560 LMCD1Q9NZU5 365 aa17.64■□□□□ 0.41
ZNF550-207ENST00000595560 SMC3Q9UQE7 1217 aa17.64■□□□□ 0.41
ZNF550-207ENST00000595560 ZBTB39O15060 712 aa17.63■□□□□ 0.41
ZNF550-207ENST00000595560 LINC00271P0C7V0 271 aa17.63■□□□□ 0.41
ZNF550-207ENST00000595560 TOB1P50616 345 aaPredicted RBP17.63■□□□□ 0.41
ZNF550-207ENST00000595560 BTG3Q14201 252 aaPredicted RBP17.63■□□□□ 0.41
ZNF550-207ENST00000595560 NBR1Q14596 966 aa17.63■□□□□ 0.41
ZNF550-207ENST00000595560 EMC2Q15006 297 aa17.63■□□□□ 0.41
ZNF550-207ENST00000595560 RHPN2Q8IUC4 686 aa17.63■□□□□ 0.41
ZNF550-207ENST00000595560 TMEM192Q8IY95 271 aa17.63■□□□□ 0.41
ZNF550-207ENST00000595560 CMTR2Q8IYT2 770 aaKnown RBP17.63■□□□□ 0.41
ZNF550-207ENST00000595560 CLP1Q92989 425 aaKnown RBP17.63■□□□□ 0.41
ZNF550-207ENST00000595560 GCOM2Q9BZD3 368 aaPredicted RBP17.63■□□□□ 0.41
ZNF550-207ENST00000595560 TUFT1Q9NNX1 390 aa17.63■□□□□ 0.41
ZNF550-207ENST00000595560 ANKEF1Q9NU02 776 aa17.63■□□□□ 0.41
ZNF550-207ENST00000595560 LRFN2Q9ULH4 789 aa17.63■□□□□ 0.41
ZNF550-207ENST00000595560 RWDD3Q9Y3V2 267 aa17.63■□□□□ 0.41
ZNF550-207ENST00000595560 GTF3C3Q9Y5Q9 886 aa17.63■□□□□ 0.41
ZNF550-207ENST00000595560 A0A087WZ62 844 aa17.62■□□□□ 0.41
ZNF550-207ENST00000595560 SPATA31C1P0DKV0 1188 aa17.62■□□□□ 0.41
ZNF550-207ENST00000595560 TECP42680 631 aa17.62■□□□□ 0.41
ZNF550-207ENST00000595560 CUL4AQ13619 759 aa17.62■□□□□ 0.41
ZNF550-207ENST00000595560 CCDC85BQ15834 202 aaPredicted RBP17.62■□□□□ 0.41
ZNF550-207ENST00000595560 MICALL1Q8N3F8 863 aa17.62■□□□□ 0.41
ZNF550-207ENST00000595560 C4orf32Q8N8J7 132 aa17.62■□□□□ 0.41
ZNF550-207ENST00000595560 TCP11Q8WWU5 503 aa17.62■□□□□ 0.41
ZNF550-207ENST00000595560 PSPC1Q8WXF1 523 aaKnown RBP17.62■□□□□ 0.41
ZNF550-207ENST00000595560 PPM1EQ8WY54 764 aa17.62■□□□□ 0.41
ZNF550-207ENST00000595560 FDXACB1Q9BRP7 624 aaPredicted RBP17.62■□□□□ 0.41
ZNF550-207ENST00000595560 INO80BQ9C086 356 aaPredicted RBP17.62■□□□□ 0.41
ZNF550-207ENST00000595560 ELAC1Q9H777 363 aaKnown RBP17.62■□□□□ 0.41
ZNF550-207ENST00000595560 PCDHB7Q9Y5E2 793 aa17.62■□□□□ 0.41
ZNF550-207ENST00000595560 COL4A3BPQ9Y5P4 624 aa17.62■□□□□ 0.41
ZNF550-207ENST00000595560 ATG2AQ2TAZ0 1938 aa17.62■□□□□ 0.41
ZNF550-207ENST00000595560 C5orf67F2Z3F1 127 aa17.61■□□□□ 0.41
ZNF550-207ENST00000595560 H3BNC9 293 aa17.61■□□□□ 0.41
ZNF550-207ENST00000595560 H3BQV1 296 aa17.61■□□□□ 0.41
ZNF550-207ENST00000595560 XRCC6P12956 609 aaKnown RBP eCLIP17.61■□□□□ 0.41
ZNF550-207ENST00000595560 ZSCAN20P17040 1043 aaPredicted RBP17.61■□□□□ 0.41
ZNF550-207ENST00000595560 SFPQP23246 707 aaKnown RBP eCLIP17.61■□□□□ 0.41
ZNF550-207ENST00000595560 RARRES1P49788 294 aa17.61■□□□□ 0.41
ZNF550-207ENST00000595560 FXR2P51116 673 aaKnown RBP eCLIP17.61■□□□□ 0.41
ZNF550-207ENST00000595560 FAM189BP81408 668 aa17.61■□□□□ 0.41
ZNF550-207ENST00000595560 MCTP1Q6DN14 999 aa17.61■□□□□ 0.41
ZNF550-207ENST00000595560 CATSPER3Q86XQ3 398 aa17.61■□□□□ 0.41
ZNF550-207ENST00000595560 ERMNQ8TAM6 284 aa17.61■□□□□ 0.41
ZNF550-207ENST00000595560 TMEM143Q96AN5 459 aa17.61■□□□□ 0.41
ZNF550-207ENST00000595560 NLRP4Q96MN2 994 aa17.61■□□□□ 0.41
ZNF550-207ENST00000595560 MTRQ99707 1265 aa17.61■□□□□ 0.41
ZNF550-207ENST00000595560 POLR3CQ9BUI4 534 aaPredicted RBP17.61■□□□□ 0.41
ZNF550-207ENST00000595560 IFT122Q9HBG6 1241 aa17.61■□□□□ 0.41
ZNF550-207ENST00000595560 TMEM161AQ9NX61 479 aa17.61■□□□□ 0.41
ZNF550-207ENST00000595560 PCDHB6Q9Y5E3 794 aa17.61■□□□□ 0.41
ZNF550-207ENST00000595560 LAD1O00515 517 aa17.6■□□□□ 0.41
ZNF550-207ENST00000595560 CSDE1O75534 798 aaKnown RBP17.6■□□□□ 0.41
ZNF550-207ENST00000595560 DGAT1O75907 488 aa17.6■□□□□ 0.41
ZNF550-207ENST00000595560 RB1P06400 928 aa17.6■□□□□ 0.41
ZNF550-207ENST00000595560 FGFR4P22455 802 aa17.6■□□□□ 0.41
ZNF550-207ENST00000595560 RPA1P27694 616 aa17.6■□□□□ 0.41
ZNF550-207ENST00000595560 CTNNB1P35222 781 aa17.6■□□□□ 0.41
ZNF550-207ENST00000595560 PTGDRQ13258 359 aa17.6■□□□□ 0.41
ZNF550-207ENST00000595560 RILPL1Q5EBL4 403 aa17.6■□□□□ 0.41
ZNF550-207ENST00000595560 KSR1Q8IVT5 923 aa17.6■□□□□ 0.41
ZNF550-207ENST00000595560 PRPF31Q8WWY3 499 aaKnown RBP17.6■□□□□ 0.41
ZNF550-207ENST00000595560 CCDC43Q96MW1 224 aaKnown RBP17.6■□□□□ 0.41
ZNF550-207ENST00000595560 ATP6V0A4Q9HBG4 840 aa17.6■□□□□ 0.41
ZNF550-207ENST00000595560 XPNPEP1Q9NQW7 623 aa17.6■□□□□ 0.41
ZNF550-207ENST00000595560 CHST12Q9NRB3 414 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms