RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 ZSCAN20P17040 1043 aaPredicted RBP21.08■□□□□ 0.97
PDE4C-208ENST00000595343 EIF4BP23588 611 aaKnown RBP21.08■□□□□ 0.97
PDE4C-208ENST00000595343 PPM1AP35813 382 aa21.08■□□□□ 0.97
PDE4C-208ENST00000595343 KRT17Q04695 432 aa21.08■□□□□ 0.97
PDE4C-208ENST00000595343 PRR16Q569H4 304 aa21.08■□□□□ 0.97
PDE4C-208ENST00000595343 ECHDC2Q86YB7 292 aa21.08■□□□□ 0.97
PDE4C-208ENST00000595343 ABI1Q8IZP0 508 aa21.08■□□□□ 0.97
PDE4C-208ENST00000595343 REXO1Q8N1G1 1221 aaKnown RBP21.08■□□□□ 0.97
PDE4C-208ENST00000595343 LRRC71Q8N4P6 559 aa21.08■□□□□ 0.97
PDE4C-208ENST00000595343 FAM167AQ96KS9 214 aa21.08■□□□□ 0.97
PDE4C-208ENST00000595343 SAMM50Q9Y512 469 aa21.08■□□□□ 0.97
PDE4C-208ENST00000595343 GTF3C3Q9Y5Q9 886 aa21.08■□□□□ 0.97
PDE4C-208ENST00000595343 KMT2EQ8IZD2 1858 aa21.07■□□□□ 0.96
PDE4C-208ENST00000595343 HOXB8P17481 243 aaPredicted RBP21.07■□□□□ 0.96
PDE4C-208ENST00000595343 TMOD1P28289 359 aa21.07■□□□□ 0.96
PDE4C-208ENST00000595343 TMC7Q7Z402 723 aa21.07■□□□□ 0.96
PDE4C-208ENST00000595343 SPG21Q9NZD8 308 aa21.07■□□□□ 0.96
PDE4C-208ENST00000595343 CCDC196A0A1B0GTZ2 297 aa21.06■□□□□ 0.96
PDE4C-208ENST00000595343 SP100P23497 879 aaPredicted RBP21.06■□□□□ 0.96
PDE4C-208ENST00000595343 CIITAP33076 1130 aa21.06■□□□□ 0.96
PDE4C-208ENST00000595343 METAP2P50579 478 aaKnown RBP eCLIP21.06■□□□□ 0.96
PDE4C-208ENST00000595343 VCPP55072 806 aaKnown RBP21.06■□□□□ 0.96
PDE4C-208ENST00000595343 KRT32Q14532 448 aa21.06■□□□□ 0.96
PDE4C-208ENST00000595343 BMP2KLQ5H9B9 411 aa21.06■□□□□ 0.96
PDE4C-208ENST00000595343 CLLU1OSQ5K130 101 aa21.06■□□□□ 0.96
PDE4C-208ENST00000595343 ZNF710Q8N1W2 664 aa21.06■□□□□ 0.96
PDE4C-208ENST00000595343 RNF169Q8NCN4 708 aa21.06■□□□□ 0.96
PDE4C-208ENST00000595343 CCDC12Q8WUD4 166 aaPredicted RBP21.06■□□□□ 0.96
PDE4C-208ENST00000595343 ZNF668Q96K58 619 aaPredicted RBP21.06■□□□□ 0.96
PDE4C-208ENST00000595343 WDR64B1ANS9 1081 aa21.05■□□□□ 0.96
PDE4C-208ENST00000595343 ZNF862O60290 1169 aa21.05■□□□□ 0.96
PDE4C-208ENST00000595343 OATP04181 439 aa21.05■□□□□ 0.96
PDE4C-208ENST00000595343 HMGB1P09429 215 aaKnown RBP21.05■□□□□ 0.96
PDE4C-208ENST00000595343 GNA11P29992 359 aa21.05■□□□□ 0.96
PDE4C-208ENST00000595343 AVPR2P30518 371 aa21.05■□□□□ 0.96
PDE4C-208ENST00000595343 GPC3P51654 580 aa21.05■□□□□ 0.96
PDE4C-208ENST00000595343 FGD1P98174 961 aa21.05■□□□□ 0.96
PDE4C-208ENST00000595343 CASP10Q92851 521 aa21.05■□□□□ 0.96
PDE4C-208ENST00000595343 LENG9Q96B70 501 aa21.05■□□□□ 0.96
PDE4C-208ENST00000595343 DISC1Q9NRI5 854 aa21.05■□□□□ 0.96
PDE4C-208ENST00000595343 NRBP2Q9NSY0 501 aa21.05■□□□□ 0.96
PDE4C-208ENST00000595343 A0A0U1RQF3 1178 aa21.04■□□□□ 0.96
PDE4C-208ENST00000595343 DARSP14868 501 aaKnown RBP21.04■□□□□ 0.96
PDE4C-208ENST00000595343 PRKCEQ02156 737 aa21.04■□□□□ 0.96
PDE4C-208ENST00000595343 SMC1AQ14683 1233 aaKnown RBP21.04■□□□□ 0.96
PDE4C-208ENST00000595343 ZBTB33Q86T24 672 aa21.04■□□□□ 0.96
PDE4C-208ENST00000595343 ZNF598Q86UK7 904 aaKnown RBP21.04■□□□□ 0.96
PDE4C-208ENST00000595343 SLC39A11Q8N1S5 342 aa21.04■□□□□ 0.96
PDE4C-208ENST00000595343 MRPL43Q8N983 215 aaKnown RBP21.04■□□□□ 0.96
PDE4C-208ENST00000595343 CDH22Q9UJ99 828 aa21.04■□□□□ 0.96
PDE4C-208ENST00000595343 NR2E1Q9Y466 385 aa21.04■□□□□ 0.96
PDE4C-208ENST00000595343 HCFC2Q9Y5Z7 792 aa21.04■□□□□ 0.96
PDE4C-208ENST00000595343 C2orf71A6NGG8 1288 aa21.03■□□□□ 0.96
PDE4C-208ENST00000595343 PRPF3O43395 683 aaKnown RBP21.03■□□□□ 0.96
PDE4C-208ENST00000595343 EOMESO95936 686 aa21.03■□□□□ 0.96
PDE4C-208ENST00000595343 CPA1P15085 419 aa21.03■□□□□ 0.96
PDE4C-208ENST00000595343 FGFR4P22455 802 aa21.03■□□□□ 0.96
PDE4C-208ENST00000595343 TPRNQ4KMQ1 711 aa21.03■□□□□ 0.96
PDE4C-208ENST00000595343 HELQQ8TDG4 1101 aa21.03■□□□□ 0.96
PDE4C-208ENST00000595343 SCLT1Q96NL6 688 aa21.03■□□□□ 0.96
PDE4C-208ENST00000595343 TSHZ2Q9NRE2 1034 aa21.03■□□□□ 0.96
PDE4C-208ENST00000595343 WDR81Q562E7 1941 aa21.03■□□□□ 0.96
PDE4C-208ENST00000595343 USP34Q70CQ2 3546 aa21.03■□□□□ 0.96
PDE4C-208ENST00000595343 ZFHX2Q9C0A1 2572 aaPredicted RBP21.02■□□□□ 0.96
PDE4C-208ENST00000595343 UGCGQ16739 394 aa21.02■□□□□ 0.96
PDE4C-208ENST00000595343 CES5AQ6NT32 575 aa21.02■□□□□ 0.96
PDE4C-208ENST00000595343 Q6ZUG5 572 aa21.02■□□□□ 0.96
PDE4C-208ENST00000595343 SKAP1Q86WV1 359 aa21.02■□□□□ 0.96
PDE4C-208ENST00000595343 KREMEN2Q8NCW0 462 aa21.02■□□□□ 0.96
PDE4C-208ENST00000595343 BICD2Q8TD16 824 aa21.02■□□□□ 0.96
PDE4C-208ENST00000595343 BRF1Q92994 677 aa21.02■□□□□ 0.96
PDE4C-208ENST00000595343 RIPOR3Q96MK2 946 aa21.02■□□□□ 0.96
PDE4C-208ENST00000595343 ADAM7Q9H2U9 754 aa21.02■□□□□ 0.96
PDE4C-208ENST00000595343 POMKQ9H5K3 350 aa21.02■□□□□ 0.96
PDE4C-208ENST00000595343 FAM86C1Q9NVL1 165 aa21.02■□□□□ 0.96
PDE4C-208ENST00000595343 NT5C1B-RDH14C9J2C7 533 aa21.01■□□□□ 0.95
PDE4C-208ENST00000595343 MSH4O15457 936 aa21.01■□□□□ 0.95
PDE4C-208ENST00000595343 EDIL3O43854 480 aa21.01■□□□□ 0.95
PDE4C-208ENST00000595343 ST18O60284 1047 aa21.01■□□□□ 0.95
PDE4C-208ENST00000595343 CLASP2O75122 1294 aaKnown RBP21.01■□□□□ 0.95
PDE4C-208ENST00000595343 PDGFBP01127 241 aaPredicted RBP21.01■□□□□ 0.95
PDE4C-208ENST00000595343 ITIH3Q06033 890 aa21.01■□□□□ 0.95
PDE4C-208ENST00000595343 TBC1D8BQ0IIM8 1120 aa21.01■□□□□ 0.95
PDE4C-208ENST00000595343 NLRP7Q8WX94 980 aa21.01■□□□□ 0.95
PDE4C-208ENST00000595343 PHKBQ93100 1093 aa21.01■□□□□ 0.95
PDE4C-208ENST00000595343 CCDC136Q96JN2 1154 aa21.01■□□□□ 0.95
PDE4C-208ENST00000595343 NECTIN4Q96NY8 510 aa21.01■□□□□ 0.95
PDE4C-208ENST00000595343 RIT2Q99578 217 aa21.01■□□□□ 0.95
PDE4C-208ENST00000595343 MRPL9Q9BYD2 267 aaKnown RBP21.01■□□□□ 0.95
PDE4C-208ENST00000595343 DACT1Q9NYF0 836 aa21.01■□□□□ 0.95
PDE4C-208ENST00000595343 NID2Q14112 1375 aa21■□□□□ 0.95
PDE4C-208ENST00000595343 C2CD4DB7Z1M9 353 aa21■□□□□ 0.95
PDE4C-208ENST00000595343 CHMP2AO43633 222 aa21■□□□□ 0.95
PDE4C-208ENST00000595343 GAS7O60861 476 aa21■□□□□ 0.95
PDE4C-208ENST00000595343 CSDE1O75534 798 aaKnown RBP21■□□□□ 0.95
PDE4C-208ENST00000595343 ALDH7A1P49419 539 aaKnown RBP21■□□□□ 0.95
PDE4C-208ENST00000595343 BCAR1P56945 870 aa21■□□□□ 0.95
PDE4C-208ENST00000595343 AKAP17AQ02040 695 aaKnown RBP21■□□□□ 0.95
PDE4C-208ENST00000595343 TARBP2Q15633 366 aaKnown RBP21■□□□□ 0.95
PDE4C-208ENST00000595343 IRF2BPLQ9H1B7 796 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms