RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 ZSCAN20P17040 1043 aaPredicted RBP19.84■□□□□ 0.77
SHKBP1-204ENST00000594862 TXKP42681 527 aa19.84■□□□□ 0.77
SHKBP1-204ENST00000594862 POLGP54098 1239 aaPredicted RBP19.84■□□□□ 0.77
SHKBP1-204ENST00000594862 EPC2Q52LR7 807 aa19.84■□□□□ 0.77
SHKBP1-204ENST00000594862 TMEM192Q8IY95 271 aa19.84■□□□□ 0.77
SHKBP1-204ENST00000594862 CRIPAKQ8N1N5 446 aa19.84■□□□□ 0.77
SHKBP1-204ENST00000594862 MICALL1Q8N3F8 863 aa19.84■□□□□ 0.77
SHKBP1-204ENST00000594862 GDPD5Q8WTR4 605 aa19.84■□□□□ 0.77
SHKBP1-204ENST00000594862 ATXN2LQ8WWM7 1075 aaKnown RBP19.84■□□□□ 0.77
SHKBP1-204ENST00000594862 TCP11Q8WWU5 503 aa19.84■□□□□ 0.77
SHKBP1-204ENST00000594862 CCDC43Q96MW1 224 aaKnown RBP19.84■□□□□ 0.77
SHKBP1-204ENST00000594862 ADAM2Q99965 735 aa19.84■□□□□ 0.77
SHKBP1-204ENST00000594862 C11orf84Q9BUA3 381 aaPredicted RBP19.84■□□□□ 0.77
SHKBP1-204ENST00000594862 ELAC1Q9H777 363 aaKnown RBP19.84■□□□□ 0.77
SHKBP1-204ENST00000594862 PCDHB7Q9Y5E2 793 aa19.84■□□□□ 0.77
SHKBP1-204ENST00000594862 ARID2Q68CP9 1835 aa19.83■□□□□ 0.77
SHKBP1-204ENST00000594862 C5orf67F2Z3F1 127 aa19.83■□□□□ 0.77
SHKBP1-204ENST00000594862 HOXA2O43364 376 aa19.83■□□□□ 0.77
SHKBP1-204ENST00000594862 SFPQP23246 707 aaKnown RBP eCLIP19.83■□□□□ 0.77
SHKBP1-204ENST00000594862 MCM7P33993 719 aa19.83■□□□□ 0.77
SHKBP1-204ENST00000594862 CCDC85BQ15834 202 aaPredicted RBP19.83■□□□□ 0.77
SHKBP1-204ENST00000594862 PLA2G4FQ68DD2 849 aa19.83■□□□□ 0.77
SHKBP1-204ENST00000594862 RTN4RL1Q86UN2 441 aaPredicted RBP19.83■□□□□ 0.77
SHKBP1-204ENST00000594862 CLP1Q92989 425 aaKnown RBP19.83■□□□□ 0.77
SHKBP1-204ENST00000594862 DYDC2Q96IM9 177 aa19.83■□□□□ 0.77
SHKBP1-204ENST00000594862 TMX3Q96JJ7 454 aa19.83■□□□□ 0.77
SHKBP1-204ENST00000594862 EIF2AK1Q9BQI3 630 aaKnown RBP19.83■□□□□ 0.77
SHKBP1-204ENST00000594862 PLVAPQ9BX97 442 aa19.83■□□□□ 0.77
SHKBP1-204ENST00000594862 DHX33Q9H6R0 707 aaKnown RBP19.83■□□□□ 0.77
SHKBP1-204ENST00000594862 SUCLA2Q9P2R7 463 aaPredicted RBP19.83■□□□□ 0.77
SHKBP1-204ENST00000594862 TRANK1O15050 2925 aa19.82■□□□□ 0.76
SHKBP1-204ENST00000594862 TMEM150BA6NC51 233 aa19.82■□□□□ 0.76
SHKBP1-204ENST00000594862 C9IYK1 514 aa19.82■□□□□ 0.76
SHKBP1-204ENST00000594862 H3BNC9 293 aa19.82■□□□□ 0.76
SHKBP1-204ENST00000594862 OR52Z1P0C646 297 aa19.82■□□□□ 0.76
SHKBP1-204ENST00000594862 ATP2B1P20020 1258 aa19.82■□□□□ 0.76
SHKBP1-204ENST00000594862 U2AF2P26368 475 aaKnown RBP eCLIP19.82■□□□□ 0.76
SHKBP1-204ENST00000594862 CTNNB1P35222 781 aa19.82■□□□□ 0.76
SHKBP1-204ENST00000594862 CYP4A11Q02928 519 aa19.82■□□□□ 0.76
SHKBP1-204ENST00000594862 AAK1Q2M2I8 961 aa19.82■□□□□ 0.76
SHKBP1-204ENST00000594862 TIGD5Q53EQ6 642 aa19.82■□□□□ 0.76
SHKBP1-204ENST00000594862 XKR9Q5GH70 373 aa19.82■□□□□ 0.76
SHKBP1-204ENST00000594862 TTC38Q5R3I4 469 aa19.82■□□□□ 0.76
SHKBP1-204ENST00000594862 SPRED2Q7Z698 418 aa19.82■□□□□ 0.76
SHKBP1-204ENST00000594862 TPH2Q8IWU9 490 aa19.82■□□□□ 0.76
SHKBP1-204ENST00000594862 ERMNQ8TAM6 284 aa19.82■□□□□ 0.76
SHKBP1-204ENST00000594862 PSPC1Q8WXF1 523 aaKnown RBP19.82■□□□□ 0.76
SHKBP1-204ENST00000594862 RSPH1Q8WYR4 309 aa19.82■□□□□ 0.76
SHKBP1-204ENST00000594862 SYMPKQ92797 1274 aaKnown RBP19.82■□□□□ 0.76
SHKBP1-204ENST00000594862 HSD17B14Q9BPX1 270 aa19.82■□□□□ 0.76
SHKBP1-204ENST00000594862 LMAN2LQ9H0V9 348 aa19.82■□□□□ 0.76
SHKBP1-204ENST00000594862 ANKEF1Q9NU02 776 aa19.82■□□□□ 0.76
SHKBP1-204ENST00000594862 TMEM161AQ9NX61 479 aa19.82■□□□□ 0.76
SHKBP1-204ENST00000594862 DACT1Q9NYF0 836 aa19.82■□□□□ 0.76
SHKBP1-204ENST00000594862 RGL1Q9NZL6 768 aa19.82■□□□□ 0.76
SHKBP1-204ENST00000594862 COG5Q9UP83 839 aa19.82■□□□□ 0.76
SHKBP1-204ENST00000594862 REV3LO60673 3130 aa19.82■□□□□ 0.76
SHKBP1-204ENST00000594862 SLITRK3O94933 977 aa19.81■□□□□ 0.76
SHKBP1-204ENST00000594862 BMPR1AP36894 532 aa19.81■□□□□ 0.76
SHKBP1-204ENST00000594862 GPM6BQ13491 265 aa19.81■□□□□ 0.76
SHKBP1-204ENST00000594862 DSC3Q14574 896 aa19.81■□□□□ 0.76
SHKBP1-204ENST00000594862 SKIV2LQ15477 1246 aaKnown RBP19.81■□□□□ 0.76
SHKBP1-204ENST00000594862 NAALADL2Q58DX5 795 aa19.81■□□□□ 0.76
SHKBP1-204ENST00000594862 RHPN2Q8IUC4 686 aa19.81■□□□□ 0.76
SHKBP1-204ENST00000594862 MRPL38Q96DV4 380 aaKnown RBP19.81■□□□□ 0.76
SHKBP1-204ENST00000594862 ATP6V0A4Q9HBG4 840 aa19.81■□□□□ 0.76
SHKBP1-204ENST00000594862 TUFT1Q9NNX1 390 aa19.81■□□□□ 0.76
SHKBP1-204ENST00000594862 PRDM6Q9NQX0 595 aa19.81■□□□□ 0.76
SHKBP1-204ENST00000594862 CHST12Q9NRB3 414 aa19.81■□□□□ 0.76
SHKBP1-204ENST00000594862 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.81■□□□□ 0.76
SHKBP1-204ENST00000594862 STK24Q9Y6E0 443 aa19.81■□□□□ 0.76
SHKBP1-204ENST00000594862 ASAP2O43150 1006 aa19.8■□□□□ 0.76
SHKBP1-204ENST00000594862 MGEA5O60502 916 aa19.8■□□□□ 0.76
SHKBP1-204ENST00000594862 XRCC6P12956 609 aaKnown RBP eCLIP19.8■□□□□ 0.76
SHKBP1-204ENST00000594862 NPEPPSP55786 919 aa19.8■□□□□ 0.76
SHKBP1-204ENST00000594862 FAM189BP81408 668 aa19.8■□□□□ 0.76
SHKBP1-204ENST00000594862 CTTNQ14247 550 aaKnown RBP19.8■□□□□ 0.76
SHKBP1-204ENST00000594862 EMC2Q15006 297 aa19.8■□□□□ 0.76
SHKBP1-204ENST00000594862 TJAP1Q5JTD0 557 aa19.8■□□□□ 0.76
SHKBP1-204ENST00000594862 SH2D3AQ9BRG2 576 aa19.8■□□□□ 0.76
SHKBP1-204ENST00000594862 RAB34Q9BZG1 259 aa19.8■□□□□ 0.76
SHKBP1-204ENST00000594862 WRAP73Q9P2S5 460 aaPredicted RBP19.8■□□□□ 0.76
SHKBP1-204ENST00000594862 COL4A3BPQ9Y5P4 624 aa19.8■□□□□ 0.76
SHKBP1-204ENST00000594862 LAD1O00515 517 aa19.79■□□□□ 0.76
SHKBP1-204ENST00000594862 WNT7AO00755 349 aa19.79■□□□□ 0.76
SHKBP1-204ENST00000594862 DGAT1O75907 488 aa19.79■□□□□ 0.76
SHKBP1-204ENST00000594862 SKIP12755 728 aa19.79■□□□□ 0.76
SHKBP1-204ENST00000594862 MRPS5P82675 430 aaKnown RBP19.79■□□□□ 0.76
SHKBP1-204ENST00000594862 DRP2Q13474 957 aa19.79■□□□□ 0.76
SHKBP1-204ENST00000594862 PCBP1Q15365 356 aaKnown RBP eCLIP19.79■□□□□ 0.76
SHKBP1-204ENST00000594862 HAUS3Q68CZ6 603 aa19.79■□□□□ 0.76
SHKBP1-204ENST00000594862 P2RX5Q93086 422 aa19.79■□□□□ 0.76
SHKBP1-204ENST00000594862 MTRQ99707 1265 aa19.79■□□□□ 0.76
SHKBP1-204ENST00000594862 TMEM60Q9H2L4 133 aa19.79■□□□□ 0.76
SHKBP1-204ENST00000594862 AAASQ9NRG9 546 aa19.79■□□□□ 0.76
SHKBP1-204ENST00000594862 A0A087WZ62 844 aa19.78■□□□□ 0.76
SHKBP1-204ENST00000594862 POTEMA6NI47 508 aa19.78■□□□□ 0.76
SHKBP1-204ENST00000594862 H3BQV1 296 aa19.78■□□□□ 0.76
SHKBP1-204ENST00000594862 MUTP22033 750 aa19.78■□□□□ 0.76
SHKBP1-204ENST00000594862 MXD4Q14582 209 aaPredicted RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms