RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 MEA1Q16626 185 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 TTMPQ5BVD1 217 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 AGAP9Q5VTM2 703 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 FOXR2Q6PJQ5 311 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 ABRAXAS1Q6UWZ7 409 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 CHMP6Q96FZ7 201 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 FGD4Q96M96 766 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 DNAJC7Q99615 494 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 DBNDD2Q9BQY9 259 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 CENPKQ9BS16 269 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 TCHPQ9BT92 498 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 OSBPL7Q9BZF2 842 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 EDEM3Q9BZQ6 932 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 SLC13A1Q9BZW2 595 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 TCF7L2Q9NQB0 619 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 TXLNGQ9NUQ3 528 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.74□□□□□ -1.65
LRIT3-202ENST00000594814 AIPL1Q9NZN9 384 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 SAMD15Q9P1V8 674 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 CHMP3Q9Y3E7 222 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 ZNF831Q5JPB2 1677 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 SMIM22K7EJ46 135 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 N4BP3O15049 544 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 TACC1O75410 805 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 ARIH2O95376 493 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 PCCAP05165 728 aaPredicted RBP4.74□□□□□ -1.65
LRIT3-202ENST00000594814 COL6A2P12110 1019 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 CCNB1P14635 433 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 XIAPP98170 497 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 PDE1BQ01064 536 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 PLCB3Q01970 1234 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 INAQ16352 499 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 ANKRD20A2Q5SQ80 823 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 SYCP2LQ5T4T6 812 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 ANKRD20A1Q5TYW2 823 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 ANKRD20A3Q5VUR7 823 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 MYSM1Q5VVJ2 828 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 BTNL9Q6UXG8 535 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 SPOCD1Q6ZMY3 1216 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 C1orf216Q8TAB5 229 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 DYDC1Q8WWB3 177 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 NXPE3Q969Y0 559 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 ZNF570Q96NI8 536 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 NEK1Q96PY6 1258 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 ARHGEF3Q9NR81 526 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 RMND1Q9NWS8 449 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 PRKAG2Q9UGJ0 569 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 NARFQ9UHQ1 456 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 SH3GLB1Q9Y371 365 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 LUC7L2Q9Y383 392 aaKnown RBP4.74□□□□□ -1.65
LRIT3-202ENST00000594814 RIC1Q4ADV7 1423 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 ERVV-1B6SEH8 477 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 ECE2O60344 883 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 LCA5LO95447 670 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 CCDC159P0C7I6 412 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 PDHBP11177 359 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 ITGA6P23229 1130 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 ANXA13P27216 316 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 ADD2P35612 726 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 ABL2P42684 1182 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 RANBP1P43487 201 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 GALNTL6Q49A17 601 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 SAMD14Q8IZD0 417 aaPredicted RBP4.74□□□□□ -1.65
LRIT3-202ENST00000594814 PHOSPHO2Q8TCD6 241 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 DIS3LQ8TF46 1054 aaKnown RBP4.74□□□□□ -1.65
LRIT3-202ENST00000594814 ABHD10Q9NUJ1 306 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 SPATA7Q9P0W8 599 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 THEGQ9P2T0 379 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 ADD3Q9UEY8 706 aaKnown RBP4.74□□□□□ -1.65
LRIT3-202ENST00000594814 GTF2IRD1Q9UHL9 959 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 SNX12Q9UMY4 172 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 PRKAB1Q9Y478 270 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 TIMM22Q9Y584 194 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 NID2Q14112 1375 aa4.74□□□□□ -1.65
LRIT3-202ENST00000594814 PHACTR2O75167 634 aa4.73□□□□□ -1.65
LRIT3-202ENST00000594814 DDX58O95786 925 aaKnown RBP4.73□□□□□ -1.65
LRIT3-202ENST00000594814 GNRH1P01148 92 aa4.73□□□□□ -1.65
LRIT3-202ENST00000594814 LMOD1P29536 600 aaPredicted RBP4.73□□□□□ -1.65
LRIT3-202ENST00000594814 TNNC1P63316 161 aa4.73□□□□□ -1.65
LRIT3-202ENST00000594814 GABREP78334 506 aa4.73□□□□□ -1.65
LRIT3-202ENST00000594814 RNASELQ05823 741 aaKnown RBP4.73□□□□□ -1.65
LRIT3-202ENST00000594814 NDUFA5Q16718 116 aa4.73□□□□□ -1.65
LRIT3-202ENST00000594814 CCDC14Q49A88 953 aa4.73□□□□□ -1.65
LRIT3-202ENST00000594814 NXNQ6DKJ4 435 aa4.73□□□□□ -1.65
LRIT3-202ENST00000594814 ALKBH2Q6NS38 261 aa4.73□□□□□ -1.65
LRIT3-202ENST00000594814 ZCCHC8Q6NZY4 707 aaKnown RBP4.73□□□□□ -1.65
LRIT3-202ENST00000594814 C16orf87Q6PH81 154 aa4.73□□□□□ -1.65
LRIT3-202ENST00000594814 GPIHBP1Q8IV16 184 aa4.73□□□□□ -1.65
LRIT3-202ENST00000594814 KRI1Q8N9T8 703 aaKnown RBP4.73□□□□□ -1.65
LRIT3-202ENST00000594814 NOA1Q8NC60 698 aaKnown RBP4.73□□□□□ -1.65
LRIT3-202ENST00000594814 GABPB2Q8TAK5 448 aaPredicted RBP4.73□□□□□ -1.65
LRIT3-202ENST00000594814 ZNF75CPQ92670 426 aaPredicted RBP4.73□□□□□ -1.65
LRIT3-202ENST00000594814 GSDMAQ96QA5 445 aa4.73□□□□□ -1.65
LRIT3-202ENST00000594814 USP28Q96RU2 1077 aa4.73□□□□□ -1.65
LRIT3-202ENST00000594814 SEC62Q99442 399 aaKnown RBP4.73□□□□□ -1.65
LRIT3-202ENST00000594814 PI4K2AQ9BTU6 479 aa4.73□□□□□ -1.65
LRIT3-202ENST00000594814 RPAP3Q9H6T3 665 aaPredicted RBP4.73□□□□□ -1.65
LRIT3-202ENST00000594814 RMI1Q9H9A7 625 aa4.73□□□□□ -1.65
LRIT3-202ENST00000594814 NCOA5Q9HCD5 579 aaKnown RBP4.73□□□□□ -1.65
LRIT3-202ENST00000594814 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms