RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 ZNF574Q6ZN55 896 aaPredicted RBP3.66□□□□□ -1.82
VRK3-204ENST00000593912 C15orf39Q6ZRI6 1047 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 Q6ZS52 159 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 TSHZ1Q6ZSZ6 1077 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 GPR155Q7Z3F1 870 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 PIP4P1Q86T03 277 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 TMEM173Q86WV6 379 aaPredicted RBP3.66□□□□□ -1.82
VRK3-204ENST00000593912 ABCA7Q8IZY2 2146 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 VPS52Q8N1B4 723 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 SDR42E1Q8WUS8 393 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 GAB3Q8WWW8 586 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 SMG7Q92540 1137 aaKnown RBP3.66□□□□□ -1.82
VRK3-204ENST00000593912 STAMQ92783 540 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 ZNF558Q96NG5 402 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 CAMK1GQ96NX5 476 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 NELL2Q99435 816 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 C16orf70Q9BSU1 422 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 ZBP1Q9H171 429 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 TMX1Q9H3N1 280 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 KANSL2Q9H9L4 492 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 MAN1C1Q9NR34 630 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 DKK4Q9UBT3 224 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 ADD3Q9UEY8 706 aaKnown RBP3.66□□□□□ -1.82
VRK3-204ENST00000593912 FEM1BQ9UK73 627 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 PCDHGA5Q9Y5G8 931 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 CDY2AQ9Y6F7 541 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 ICE1Q9Y2F5 2266 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 SPG11Q96JI7 2443 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 KAT6AQ92794 2004 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 THADAQ6YHU6 1953 aa3.65□□□□□ -1.82
VRK3-204ENST00000593912 BCLAF3A2AJT9 711 aaKnown RBP3.65□□□□□ -1.83
VRK3-204ENST00000593912 BLACEA4D250 179 aa3.65□□□□□ -1.83
VRK3-204ENST00000593912 TRABD2BA6NFA1 517 aa3.65□□□□□ -1.83
VRK3-204ENST00000593912 ERVH48-1M5A8F1 160 aa3.65□□□□□ -1.83
VRK3-204ENST00000593912 TERTO14746 1132 aaKnown RBP3.65□□□□□ -1.83
VRK3-204ENST00000593912 DCLK1O15075 740 aa3.65□□□□□ -1.83
VRK3-204ENST00000593912 MEFVO15553 781 aaPredicted RBP3.65□□□□□ -1.83
VRK3-204ENST00000593912 TLX3O43711 291 aaPredicted RBP3.65□□□□□ -1.83
VRK3-204ENST00000593912 ZMYND10O75800 440 aa3.65□□□□□ -1.83
VRK3-204ENST00000593912 SSBP05455 408 aaKnown RBP eCLIP3.65□□□□□ -1.83
VRK3-204ENST00000593912 FTH1P19P0C7X4 201 aa3.65□□□□□ -1.83
VRK3-204ENST00000593912 CHRNB1P11230 501 aa3.65□□□□□ -1.83
VRK3-204ENST00000593912 RDXP35241 583 aaKnown RBP3.65□□□□□ -1.83
VRK3-204ENST00000593912 IL15P40933 162 aaPredicted RBP3.65□□□□□ -1.83
VRK3-204ENST00000593912 IL12RB1P42701 662 aa3.65□□□□□ -1.83
VRK3-204ENST00000593912 ZAP70P43403 619 aa3.65□□□□□ -1.83
VRK3-204ENST00000593912 ALDH7A1P49419 539 aaKnown RBP3.65□□□□□ -1.83
VRK3-204ENST00000593912 SARSP49591 514 aaKnown RBP3.65□□□□□ -1.83
VRK3-204ENST00000593912 CXADRP78310 365 aa3.65□□□□□ -1.83
VRK3-204ENST00000593912 NTHL1P78549 312 aa3.65□□□□□ -1.83
VRK3-204ENST00000593912 PFKPQ01813 784 aa3.65□□□□□ -1.83
VRK3-204ENST00000593912 IKQ13123 557 aaPredicted RBP3.65□□□□□ -1.83
VRK3-204ENST00000593912 TKFCQ3LXA3 575 aa3.65□□□□□ -1.83
VRK3-204ENST00000593912 HSDL1Q3SXM5 330 aa3.65□□□□□ -1.83
VRK3-204ENST00000593912 PLK5Q496M5 336 aa3.65□□□□□ -1.83
VRK3-204ENST00000593912 WDR44Q5JSH3 913 aa3.65□□□□□ -1.83
VRK3-204ENST00000593912 SYDE2Q5VT97 1194 aa3.65□□□□□ -1.83
VRK3-204ENST00000593912 SLC39A11Q8N1S5 342 aa3.65□□□□□ -1.83
VRK3-204ENST00000593912 PPTC7Q8NI37 304 aa3.65□□□□□ -1.83
VRK3-204ENST00000593912 BCL7CQ8WUZ0 217 aaPredicted RBP3.65□□□□□ -1.83
VRK3-204ENST00000593912 LMBR1Q8WVP7 490 aa3.65□□□□□ -1.83
VRK3-204ENST00000593912 ADAMTS14Q8WXS8 1223 aa3.65□□□□□ -1.83
VRK3-204ENST00000593912 ZNF707Q96C28 371 aaPredicted RBP3.65□□□□□ -1.83
VRK3-204ENST00000593912 ZBTB10Q96DT7 871 aa3.65□□□□□ -1.83
VRK3-204ENST00000593912 RIOK1Q9BRS2 568 aaKnown RBP3.65□□□□□ -1.83
VRK3-204ENST00000593912 PLA2G2FQ9BZM2 168 aa3.65□□□□□ -1.83
VRK3-204ENST00000593912 DUSP15Q9H1R2 295 aaPredicted RBP3.65□□□□□ -1.83
VRK3-204ENST00000593912 FSCN3Q9NQT6 498 aa3.65□□□□□ -1.83
VRK3-204ENST00000593912 RNF19AQ9NV58 838 aa3.65□□□□□ -1.83
VRK3-204ENST00000593912 SPG21Q9NZD8 308 aa3.65□□□□□ -1.83
VRK3-204ENST00000593912 SWAP70Q9UH65 585 aa3.65□□□□□ -1.83
VRK3-204ENST00000593912 CCPG1Q9ULG6 757 aa3.65□□□□□ -1.83
VRK3-204ENST00000593912 PADI3Q9ULW8 664 aa3.65□□□□□ -1.83
VRK3-204ENST00000593912 MAN2B2Q9Y2E5 1009 aa3.65□□□□□ -1.83
VRK3-204ENST00000593912 MRPS17Q9Y2R5 130 aaKnown RBP3.65□□□□□ -1.83
VRK3-204ENST00000593912 PCDHB7Q9Y5E2 793 aa3.65□□□□□ -1.83
VRK3-204ENST00000593912 NOTCH4Q99466 2003 aa3.65□□□□□ -1.83
VRK3-204ENST00000593912 SPTBN1Q01082 2364 aaKnown RBP3.65□□□□□ -1.83
VRK3-204ENST00000593912 CCDC194A0A1B0GVG4 234 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 FAM149AA5PLN7 773 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 H3BRB1 525 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 KHNYNO15037 678 aaKnown RBP3.64□□□□□ -1.83
VRK3-204ENST00000593912 EXTL3O43909 919 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 IDH1O75874 414 aaKnown RBP3.64□□□□□ -1.83
VRK3-204ENST00000593912 CFBP00751 764 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 CNPP09543 421 aaKnown RBP3.64□□□□□ -1.83
VRK3-204ENST00000593912 SPATA31D3P0C874 917 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 CTSAP10619 480 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 NDUFV2P19404 249 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 ELAVL4P26378 380 aaKnown RBP3.64□□□□□ -1.83
VRK3-204ENST00000593912 KLRC2P26717 231 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 PPM1AP35813 382 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 STAT2P52630 851 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 RPS6P62753 249 aaKnown RBP3.64□□□□□ -1.83
VRK3-204ENST00000593912 ADAM17P78536 824 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 TMEM62Q0P6H9 643 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 SEMA3BQ13214 749 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 SEMA3FQ13275 785 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 SERINC3Q13530 473 aa3.64□□□□□ -1.83
VRK3-204ENST00000593912 C6orf132Q5T0Z8 1188 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms