RNA–Protein interactions for RNA: ENST00000593504.5

SYMPK-202, Transcript of symplekin, humanhuman

TSL 2

Gene SYMPK, Length 5,107 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-202ENST00000593504 JPH1Q9HDC5 661 aaPredicted RBP16.4■□□□□ 0.22
SYMPK-202ENST00000593504 ITIH3Q06033 890 aa16.39■□□□□ 0.22
SYMPK-202ENST00000593504 CASC4Q6P4E1 433 aa16.39■□□□□ 0.22
SYMPK-202ENST00000593504 PALM2Q8IXS6 379 aa16.39■□□□□ 0.22
SYMPK-202ENST00000593504 MXRA8Q9BRK3 442 aa16.39■□□□□ 0.22
SYMPK-202ENST00000593504 TEX13BQ9BXU2 312 aa16.39■□□□□ 0.22
SYMPK-202ENST00000593504 TRIM7Q9C029 511 aa16.39■□□□□ 0.22
SYMPK-202ENST00000593504 STIM2Q9P246 746 aa16.39■□□□□ 0.22
SYMPK-202ENST00000593504 ALDH3A1P30838 453 aa16.39■□□□□ 0.21
SYMPK-202ENST00000593504 R3HDM1Q15032 1099 aaKnown RBP16.39■□□□□ 0.21
SYMPK-202ENST00000593504 MAPK6Q16659 721 aa16.39■□□□□ 0.21
SYMPK-202ENST00000593504 EDRF1Q3B7T1 1238 aa16.39■□□□□ 0.21
SYMPK-202ENST00000593504 SAMD7Q7Z3H4 446 aa16.39■□□□□ 0.21
SYMPK-202ENST00000593504 SLC16A10Q8TF71 515 aa16.39■□□□□ 0.21
SYMPK-202ENST00000593504 FAM163AQ96GL9 167 aaPredicted RBP16.39■□□□□ 0.21
SYMPK-202ENST00000593504 FBXO28Q9NVF7 368 aa16.39■□□□□ 0.21
SYMPK-202ENST00000593504 SPDYE2BA6NHP3 402 aa16.39■□□□□ 0.21
SYMPK-202ENST00000593504 MED7O43513 233 aa16.39■□□□□ 0.21
SYMPK-202ENST00000593504 XPOTO43592 962 aaKnown RBP16.39■□□□□ 0.21
SYMPK-202ENST00000593504 ECEL1O95672 775 aa16.39■□□□□ 0.21
SYMPK-202ENST00000593504 SPDYE6P0CI01 402 aa16.39■□□□□ 0.21
SYMPK-202ENST00000593504 IRX5P78411 483 aaPredicted RBP16.39■□□□□ 0.21
SYMPK-202ENST00000593504 SF3A3Q12874 501 aaKnown RBP eCLIP16.39■□□□□ 0.213e-6■■■■□ 25.6
SYMPK-202ENST00000593504 GRIK5Q16478 980 aa16.39■□□□□ 0.21
SYMPK-202ENST00000593504 CAPN12Q6ZSI9 719 aa16.39■□□□□ 0.21
SYMPK-202ENST00000593504 CAPN9O14815 690 aa16.39■□□□□ 0.21
SYMPK-202ENST00000593504 MSH4O15457 936 aa16.39■□□□□ 0.21
SYMPK-202ENST00000593504 KLK7P49862 253 aa16.39■□□□□ 0.21
SYMPK-202ENST00000593504 KRT39Q6A163 491 aa16.39■□□□□ 0.21
SYMPK-202ENST00000593504 CC2D1AQ6P1N0 951 aaPredicted RBP16.39■□□□□ 0.21
SYMPK-202ENST00000593504 DEFB129Q9H1M3 183 aa16.39■□□□□ 0.21
SYMPK-202ENST00000593504 DDX4Q9NQI0 724 aaKnown RBP16.39■□□□□ 0.21
SYMPK-202ENST00000593504 KBTBD4Q9NVX7 518 aa16.39■□□□□ 0.21
SYMPK-202ENST00000593504 ATP8A1Q9Y2Q0 1164 aa16.39■□□□□ 0.21
SYMPK-202ENST00000593504 PITPNM2Q9BZ72 1349 aa16.39■□□□□ 0.21
SYMPK-202ENST00000593504 C19orf81C9J6K1 198 aa16.38■□□□□ 0.21
SYMPK-202ENST00000593504 CYFIP1Q7L576 1253 aa16.38■□□□□ 0.21
SYMPK-202ENST00000593504 ANKS1AQ92625 1134 aa16.38■□□□□ 0.21
SYMPK-202ENST00000593504 P3H4Q92791 437 aa16.38■□□□□ 0.21
SYMPK-202ENST00000593504 FAM208AQ9UK61 1670 aaKnown RBP16.38■□□□□ 0.21
SYMPK-202ENST00000593504 KRT1P04264 644 aa16.38■□□□□ 0.21
SYMPK-202ENST00000593504 GPC5P78333 572 aa16.38■□□□□ 0.21
SYMPK-202ENST00000593504 LMNB2Q03252 620 aa16.38■□□□□ 0.21
SYMPK-202ENST00000593504 PSMD1Q99460 953 aa16.38■□□□□ 0.21
SYMPK-202ENST00000593504 INPP5BP32019 993 aa16.38■□□□□ 0.21
SYMPK-202ENST00000593504 CAP2P40123 477 aa16.38■□□□□ 0.21
SYMPK-202ENST00000593504 TRIM50Q86XT4 487 aa16.38■□□□□ 0.21
SYMPK-202ENST00000593504 ATRNO75882 1429 aa16.38■□□□□ 0.21
SYMPK-202ENST00000593504 CTNND1O60716 968 aaKnown RBP16.38■□□□□ 0.21
SYMPK-202ENST00000593504 NR3C2P08235 984 aa16.38■□□□□ 0.21
SYMPK-202ENST00000593504 SOX5P35711 763 aa16.38■□□□□ 0.21
SYMPK-202ENST00000593504 DR1Q01658 176 aa16.38■□□□□ 0.21
SYMPK-202ENST00000593504 DHX9Q08211 1270 aaKnown RBP16.38■□□□□ 0.21
SYMPK-202ENST00000593504 NCAPHQ15003 741 aa16.38■□□□□ 0.21
SYMPK-202ENST00000593504 Q3C1V9 767 aa16.38■□□□□ 0.21
SYMPK-202ENST00000593504 FYB2Q5VWT5 728 aa16.38■□□□□ 0.21
SYMPK-202ENST00000593504 GLYCTKQ8IVS8 523 aa16.38■□□□□ 0.21
SYMPK-202ENST00000593504 PSPC1Q8WXF1 523 aaKnown RBP16.38■□□□□ 0.21
SYMPK-202ENST00000593504 CNOT8Q9UFF9 292 aaKnown RBP16.38■□□□□ 0.21
SYMPK-202ENST00000593504 NFU1Q9UMS0 254 aa16.38■□□□□ 0.21
SYMPK-202ENST00000593504 CHD2O14647 1828 aaKnown RBP16.38■□□□□ 0.21
SYMPK-202ENST00000593504 RPS12P25398 132 aaKnown RBP16.37■□□□□ 0.21
SYMPK-202ENST00000593504 LGSNQ5TDP6 509 aa16.37■□□□□ 0.21
SYMPK-202ENST00000593504 RFX6Q8HWS3 928 aa16.37■□□□□ 0.21
SYMPK-202ENST00000593504 RIT2Q99578 217 aa16.37■□□□□ 0.21
SYMPK-202ENST00000593504 KCND2Q9NZV8 630 aa16.37■□□□□ 0.21
SYMPK-202ENST00000593504 CCDC188H7C350 402 aa16.37■□□□□ 0.21
SYMPK-202ENST00000593504 ZC2HC1CQ53FD0 456 aaPredicted RBP16.37■□□□□ 0.21
SYMPK-202ENST00000593504 DEFB132Q7Z7B7 95 aa16.37■□□□□ 0.21
SYMPK-202ENST00000593504 GMCL1Q96IK5 515 aa16.37■□□□□ 0.21
SYMPK-202ENST00000593504 HOMER3Q9NSC5 361 aa16.37■□□□□ 0.21
SYMPK-202ENST00000593504 GGA3Q9NZ52 723 aa16.37■□□□□ 0.21
SYMPK-202ENST00000593504 ACTN1P12814 892 aa16.37■□□□□ 0.21
SYMPK-202ENST00000593504 RWDD2BP57060 319 aa16.37■□□□□ 0.21
SYMPK-202ENST00000593504 BSPRYQ5W0U4 402 aa16.37■□□□□ 0.21
SYMPK-202ENST00000593504 TTC19Q6DKK2 380 aaPredicted RBP16.37■□□□□ 0.21
SYMPK-202ENST00000593504 ZNF746Q6NUN9 644 aaPredicted RBP16.37■□□□□ 0.21
SYMPK-202ENST00000593504 WHAMMQ8TF30 809 aa16.37■□□□□ 0.21
SYMPK-202ENST00000593504 RFX1P22670 979 aa16.37■□□□□ 0.21
SYMPK-202ENST00000593504 GLE1Q53GS7 698 aaKnown RBP16.37■□□□□ 0.21
SYMPK-202ENST00000593504 MAP7D3Q8IWC1 876 aa16.37■□□□□ 0.21
SYMPK-202ENST00000593504 CTAGE3PQ8IX95 158 aa16.37■□□□□ 0.21
SYMPK-202ENST00000593504 GMCL1P1Q8NEA9 526 aa16.37■□□□□ 0.21
SYMPK-202ENST00000593504 MMP19Q99542 508 aa16.37■□□□□ 0.21
SYMPK-202ENST00000593504 STX2P32856 288 aa16.36■□□□□ 0.21
SYMPK-202ENST00000593504 PHBP35232 272 aa16.36■□□□□ 0.21
SYMPK-202ENST00000593504 C15orf52Q6ZUT6 534 aaKnown RBP16.36■□□□□ 0.21
SYMPK-202ENST00000593504 CCDC13Q8IYE1 715 aa16.36■□□□□ 0.21
SYMPK-202ENST00000593504 GPD1LQ8N335 351 aa16.36■□□□□ 0.21
SYMPK-202ENST00000593504 BCAS4Q8TDM0 211 aa16.36■□□□□ 0.21
SYMPK-202ENST00000593504 RPS6KC1Q96S38 1066 aa16.36■□□□□ 0.21
SYMPK-202ENST00000593504 POLR3CQ9BUI4 534 aaPredicted RBP16.36■□□□□ 0.21
SYMPK-202ENST00000593504 TIPINQ9BVW5 301 aa16.36■□□□□ 0.21
SYMPK-202ENST00000593504 ELP3Q9H9T3 547 aa16.36■□□□□ 0.21
SYMPK-202ENST00000593504 SGK1O00141 431 aa16.36■□□□□ 0.21
SYMPK-202ENST00000593504 ZNF394Q53GI3 561 aa16.36■□□□□ 0.21
SYMPK-202ENST00000593504 HAUS1Q96CS2 278 aa16.36■□□□□ 0.21
SYMPK-202ENST00000593504 FAM49AQ9H0Q0 323 aaPredicted RBP16.36■□□□□ 0.21
SYMPK-202ENST00000593504 KCNH7Q9NS40 1196 aa16.36■□□□□ 0.21
SYMPK-202ENST00000593504 LRRC4BQ9NT99 713 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms