RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 LPLP06858 475 aa8.08□□□□□ -1.12
VMP1-215ENST00000592619 POU2F2P09086 479 aa8.08□□□□□ -1.12
VMP1-215ENST00000592619 MC4RP32245 332 aa8.08□□□□□ -1.12
VMP1-215ENST00000592619 BCAR1P56945 870 aa8.08□□□□□ -1.12
VMP1-215ENST00000592619 CR1LQ2VPA4 569 aa8.08□□□□□ -1.12
VMP1-215ENST00000592619 ARHGAP29Q52LW3 1261 aa8.08□□□□□ -1.12
VMP1-215ENST00000592619 IFIT1BQ5T764 474 aaKnown RBP8.08□□□□□ -1.12
VMP1-215ENST00000592619 MBNL2Q5VZF2 373 aaKnown RBP8.08□□□□□ -1.12
VMP1-215ENST00000592619 UNQ6494/PRO21346Q6UXR6 183 aa8.08□□□□□ -1.12
VMP1-215ENST00000592619 SAMD3Q8N6K7 520 aa8.08□□□□□ -1.12
VMP1-215ENST00000592619 IGDCC4Q8TDY8 1250 aa8.08□□□□□ -1.12
VMP1-215ENST00000592619 KIRREL1Q96J84 757 aa8.08□□□□□ -1.12
VMP1-215ENST00000592619 LRGUKQ96M69 825 aa8.08□□□□□ -1.12
VMP1-215ENST00000592619 TAAR9Q96RI9 348 aa8.08□□□□□ -1.12
VMP1-215ENST00000592619 RPS6KC1Q96S38 1066 aa8.08□□□□□ -1.12
VMP1-215ENST00000592619 SARGQ9BW04 601 aa8.08□□□□□ -1.12
VMP1-215ENST00000592619 AMNQ9BXJ7 453 aa8.08□□□□□ -1.12
VMP1-215ENST00000592619 PCMTD2Q9NV79 361 aa8.08□□□□□ -1.12
VMP1-215ENST00000592619 GALNT8Q9NY28 637 aa8.08□□□□□ -1.12
VMP1-215ENST00000592619 TUBD1Q9UJT1 453 aa8.08□□□□□ -1.12
VMP1-215ENST00000592619 MYPNQ86TC9 1320 aa8.07□□□□□ -1.12
VMP1-215ENST00000592619 HRKO00198 91 aa8.07□□□□□ -1.12
VMP1-215ENST00000592619 MAFGO15525 162 aa8.07□□□□□ -1.12
VMP1-215ENST00000592619 AP1G1O43747 822 aa8.07□□□□□ -1.12
VMP1-215ENST00000592619 OFD1O75665 1012 aa8.07□□□□□ -1.12
VMP1-215ENST00000592619 THBS2P35442 1172 aa8.07□□□□□ -1.12
VMP1-215ENST00000592619 RGS3P49796 1198 aa8.07□□□□□ -1.12
VMP1-215ENST00000592619 LGALS4P56470 323 aa8.07□□□□□ -1.12
VMP1-215ENST00000592619 NKX3-2P78367 333 aa8.07□□□□□ -1.12
VMP1-215ENST00000592619 PFKPQ01813 784 aa8.07□□□□□ -1.12
VMP1-215ENST00000592619 TRIM25Q14258 630 aaKnown RBP8.07□□□□□ -1.12
VMP1-215ENST00000592619 GRM3Q14832 879 aa8.07□□□□□ -1.12
VMP1-215ENST00000592619 PPP4R4Q6NUP7 873 aa8.07□□□□□ -1.12
VMP1-215ENST00000592619 SVIPQ8NHG7 77 aa8.07□□□□□ -1.12
VMP1-215ENST00000592619 CPA5Q8WXQ8 436 aa8.07□□□□□ -1.12
VMP1-215ENST00000592619 RPGRQ92834 1020 aaKnown RBP8.07□□□□□ -1.12
VMP1-215ENST00000592619 PITHD1Q9GZP4 211 aaPredicted RBP8.07□□□□□ -1.12
VMP1-215ENST00000592619 PRDM12Q9H4Q4 367 aa8.07□□□□□ -1.12
VMP1-215ENST00000592619 IFT122Q9HBG6 1241 aa8.07□□□□□ -1.12
VMP1-215ENST00000592619 PRSS50Q9UI38 385 aa8.07□□□□□ -1.12
VMP1-215ENST00000592619 WASF3Q9UPY6 502 aa8.07□□□□□ -1.12
VMP1-215ENST00000592619 THOC2Q8NI27 1593 aaKnown RBP8.06□□□□□ -1.12
VMP1-215ENST00000592619 MAFO75444 373 aaPredicted RBP8.06□□□□□ -1.12
VMP1-215ENST00000592619 SPIDRQ14159 915 aa8.06□□□□□ -1.12
VMP1-215ENST00000592619 CYB5RLQ6IPT4 315 aa8.06□□□□□ -1.12
VMP1-215ENST00000592619 LILRA6Q6PI73 481 aa8.06□□□□□ -1.12
VMP1-215ENST00000592619 IRF2BP1Q8IU81 584 aa8.06□□□□□ -1.12
VMP1-215ENST00000592619 THEMISQ8N1K5 641 aaPredicted RBP8.06□□□□□ -1.12
VMP1-215ENST00000592619 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.06□□□□□ -1.12
VMP1-215ENST00000592619 OR14C36Q8NHC7 312 aa8.06□□□□□ -1.12
VMP1-215ENST00000592619 MORC4Q8TE76 937 aa8.06□□□□□ -1.12
VMP1-215ENST00000592619 TSPEARQ8WU66 669 aa8.06□□□□□ -1.12
VMP1-215ENST00000592619 ALG3Q92685 438 aa8.06□□□□□ -1.12
VMP1-215ENST00000592619 HPS3Q969F9 1004 aa8.06□□□□□ -1.12
VMP1-215ENST00000592619 TTC17Q96AE7 1141 aa8.06□□□□□ -1.12
VMP1-215ENST00000592619 COA7Q96BR5 231 aa8.06□□□□□ -1.12
VMP1-215ENST00000592619 TIFAQ96CG3 184 aa8.06□□□□□ -1.12
VMP1-215ENST00000592619 SLC2A13Q96QE2 648 aa8.06□□□□□ -1.12
VMP1-215ENST00000592619 BTBD2Q9BX70 525 aa8.06□□□□□ -1.12
VMP1-215ENST00000592619 MYH16Q9H6N6 1097 aa8.06□□□□□ -1.12
VMP1-215ENST00000592619 SLC39A2Q9NP94 309 aa8.06□□□□□ -1.12
VMP1-215ENST00000592619 CHST12Q9NRB3 414 aa8.06□□□□□ -1.12
VMP1-215ENST00000592619 DPP7Q9UHL4 492 aa8.06□□□□□ -1.12
VMP1-215ENST00000592619 LOC102724159A0A0B4J2E5 919 aa8.05□□□□□ -1.12
VMP1-215ENST00000592619 CTNND1O60716 968 aaKnown RBP8.05□□□□□ -1.12
VMP1-215ENST00000592619 STAT5AP42229 794 aa8.05□□□□□ -1.12
VMP1-215ENST00000592619 ECE1P42892 770 aa8.05□□□□□ -1.12
VMP1-215ENST00000592619 GPR15P49685 360 aa8.05□□□□□ -1.12
VMP1-215ENST00000592619 PWP2Q15269 919 aaKnown RBP8.05□□□□□ -1.12
VMP1-215ENST00000592619 CCDC178Q5BJE1 867 aa8.05□□□□□ -1.12
VMP1-215ENST00000592619 SYCP2LQ5T4T6 812 aa8.05□□□□□ -1.12
VMP1-215ENST00000592619 FYB2Q5VWT5 728 aa8.05□□□□□ -1.12
VMP1-215ENST00000592619 OLFML2BQ68BL8 750 aa8.05□□□□□ -1.12
VMP1-215ENST00000592619 VASNQ6EMK4 673 aa8.05□□□□□ -1.12
VMP1-215ENST00000592619 CHST15Q7LFX5 561 aaPredicted RBP8.05□□□□□ -1.12
VMP1-215ENST00000592619 ZC3H18Q86VM9 953 aaKnown RBP8.05□□□□□ -1.12
VMP1-215ENST00000592619 PRR18Q8N4B5 295 aa8.05□□□□□ -1.12
VMP1-215ENST00000592619 PJA1Q8NG27 643 aa8.05□□□□□ -1.12
VMP1-215ENST00000592619 DDX11Q96FC9 970 aa8.05□□□□□ -1.12
VMP1-215ENST00000592619 GTPBP4Q9BZE4 634 aaKnown RBP8.05□□□□□ -1.12
VMP1-215ENST00000592619 RNF38Q9H0F5 515 aa8.05□□□□□ -1.12
VMP1-215ENST00000592619 BCAS3Q9H6U6 928 aa8.05□□□□□ -1.12
VMP1-215ENST00000592619 DDX21Q9NR30 783 aaKnown RBP eCLIP8.05□□□□□ -1.12
VMP1-215ENST00000592619 MAN1C1Q9NR34 630 aa8.05□□□□□ -1.12
VMP1-215ENST00000592619 SAP30BPQ9UHR5 308 aaKnown RBP8.05□□□□□ -1.12
VMP1-215ENST00000592619 PTPN22Q9Y2R2 807 aa8.05□□□□□ -1.12
VMP1-215ENST00000592619 CDY2AQ9Y6F7 541 aa8.05□□□□□ -1.12
VMP1-215ENST00000592619 FRMPD2Q68DX3 1309 aaPredicted RBP8.04□□□□□ -1.12
VMP1-215ENST00000592619 A0A0A6YYJ9 748 aa8.04□□□□□ -1.12
VMP1-215ENST00000592619 PHKG2P15735 406 aa8.04□□□□□ -1.12
VMP1-215ENST00000592619 APEX1P27695 318 aaKnown RBP8.04□□□□□ -1.12
VMP1-215ENST00000592619 PDE6BP35913 854 aa8.04□□□□□ -1.12
VMP1-215ENST00000592619 SLC16A1P53985 500 aa8.04□□□□□ -1.12
VMP1-215ENST00000592619 KIF23Q02241 960 aaPredicted RBP8.04□□□□□ -1.12
VMP1-215ENST00000592619 NOLC1Q14978 699 aaKnown RBP eCLIP8.04□□□□□ -1.12
VMP1-215ENST00000592619 ARTNQ5T4W7 220 aa8.04□□□□□ -1.12
VMP1-215ENST00000592619 LIPIQ6XZB0 460 aa8.04□□□□□ -1.12
VMP1-215ENST00000592619 ATG4DQ86TL0 474 aaPredicted RBP8.04□□□□□ -1.12
VMP1-215ENST00000592619 FAM43AQ8N2R8 423 aa8.04□□□□□ -1.12
VMP1-215ENST00000592619 OR10A5Q9H207 317 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms