RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 C6orf118Q5T5N4 469 aa19.47■□□□□ 0.71
SPC24-206ENST00000592540 SLC51AQ86UW1 340 aa19.47■□□□□ 0.71
SPC24-206ENST00000592540 NBPF5PQ86XG9 351 aaPredicted RBP19.47■□□□□ 0.71
SPC24-206ENST00000592540 COL23A1Q86Y22 540 aaPredicted RBP19.47■□□□□ 0.71
SPC24-206ENST00000592540 NAP1L4Q99733 375 aaKnown RBP19.47■□□□□ 0.71
SPC24-206ENST00000592540 KCNMB3Q9NPA1 279 aa19.47■□□□□ 0.71
SPC24-206ENST00000592540 CFAP73A6NFT4 308 aa19.47■□□□□ 0.71
SPC24-206ENST00000592540 AGTP01019 485 aa19.47■□□□□ 0.71
SPC24-206ENST00000592540 CLTAP09496 248 aa19.47■□□□□ 0.71
SPC24-206ENST00000592540 LMNB1P20700 586 aa19.47■□□□□ 0.71
SPC24-206ENST00000592540 RFC4P35249 363 aa19.47■□□□□ 0.71
SPC24-206ENST00000592540 MAPK7Q13164 816 aa19.47■□□□□ 0.71
SPC24-206ENST00000592540 ZNF211Q13398 564 aaPredicted RBP19.47■□□□□ 0.71
SPC24-206ENST00000592540 DDB1Q16531 1140 aa19.47■□□□□ 0.71
SPC24-206ENST00000592540 SMIM5Q71RC9 77 aa19.47■□□□□ 0.71
SPC24-206ENST00000592540 TBC1D1Q86TI0 1168 aaPredicted RBP19.47■□□□□ 0.71
SPC24-206ENST00000592540 FAM212AQ96EL1 285 aa19.47■□□□□ 0.71
SPC24-206ENST00000592540 REEP2Q9BRK0 252 aa19.47■□□□□ 0.71
SPC24-206ENST00000592540 PSTPIP2Q9H939 334 aa19.47■□□□□ 0.71
SPC24-206ENST00000592540 TYW1Q9NV66 732 aaKnown RBP19.47■□□□□ 0.71
SPC24-206ENST00000592540 ATF5Q9Y2D1 282 aaPredicted RBP19.47■□□□□ 0.71
SPC24-206ENST00000592540 AFF2P51816 1311 aa19.47■□□□□ 0.71
SPC24-206ENST00000592540 RPTORQ8N122 1335 aa19.47■□□□□ 0.71
SPC24-206ENST00000592540 GTPBP10A4D1E9 387 aaKnown RBP19.46■□□□□ 0.71
SPC24-206ENST00000592540 SLC16A3O15427 465 aaKnown RBP19.46■□□□□ 0.71
SPC24-206ENST00000592540 VIMP08670 466 aaKnown RBP19.46■□□□□ 0.71
SPC24-206ENST00000592540 ABCB4P21439 1286 aa19.46■□□□□ 0.71
SPC24-206ENST00000592540 EIF6P56537 245 aaKnown RBP19.46■□□□□ 0.71
SPC24-206ENST00000592540 PSMC6P62333 389 aa19.46■□□□□ 0.71
SPC24-206ENST00000592540 FAM133BQ5BKY9 247 aaKnown RBP19.46■□□□□ 0.71
SPC24-206ENST00000592540 PNMA8AQ86V59 439 aaPredicted RBP19.46■□□□□ 0.71
SPC24-206ENST00000592540 LINC00116Q8NCU8 138 aa19.46■□□□□ 0.71
SPC24-206ENST00000592540 CTNNBL1Q8WYA6 563 aaPredicted RBP19.46■□□□□ 0.71
SPC24-206ENST00000592540 STAMBPL1Q96FJ0 436 aa19.46■□□□□ 0.71
SPC24-206ENST00000592540 EBF2Q9HAK2 575 aa19.46■□□□□ 0.71
SPC24-206ENST00000592540 CNOT7Q9UIV1 285 aaKnown RBP19.46■□□□□ 0.71
SPC24-206ENST00000592540 ASTN1O14525 1302 aa19.46■□□□□ 0.71
SPC24-206ENST00000592540 PLIN4Q96Q06 1357 aa19.46■□□□□ 0.71
SPC24-206ENST00000592540 RPL13P26373 211 aaKnown RBP19.46■□□□□ 0.71
SPC24-206ENST00000592540 SOX5P35711 763 aa19.46■□□□□ 0.71
SPC24-206ENST00000592540 ADCY2Q08462 1091 aa19.46■□□□□ 0.71
SPC24-206ENST00000592540 ZNF543Q08ER8 600 aa19.46■□□□□ 0.71
SPC24-206ENST00000592540 CATSPER3Q86XQ3 398 aa19.46■□□□□ 0.71
SPC24-206ENST00000592540 HOOK2Q96ED9 719 aa19.46■□□□□ 0.71
SPC24-206ENST00000592540 SEMA4AQ9H3S1 761 aa19.46■□□□□ 0.71
SPC24-206ENST00000592540 GRHL1Q9NZI5 618 aa19.46■□□□□ 0.71
SPC24-206ENST00000592540 RASAL2Q9UJF2 1139 aa19.46■□□□□ 0.71
SPC24-206ENST00000592540 PABPC4Q13310 644 aaKnown RBP eCLIP19.45■□□□□ 0.77e-10■■□□□ 11.5
SPC24-206ENST00000592540 UBAP2Q5T6F2 1119 aaKnown RBP19.45■□□□□ 0.7
SPC24-206ENST00000592540 TTBK2Q6IQ55 1244 aa19.45■□□□□ 0.7
SPC24-206ENST00000592540 CLEC10AQ8IUN9 316 aa19.45■□□□□ 0.7
SPC24-206ENST00000592540 MARCH10Q8NA82 808 aaPredicted RBP19.45■□□□□ 0.7
SPC24-206ENST00000592540 SETDB2Q96T68 719 aa19.45■□□□□ 0.7
SPC24-206ENST00000592540 CLIC2O15247 247 aa19.45■□□□□ 0.7
SPC24-206ENST00000592540 ECM2O94769 699 aaPredicted RBP19.45■□□□□ 0.7
SPC24-206ENST00000592540 PTGIRP43119 386 aa19.45■□□□□ 0.7
SPC24-206ENST00000592540 RHBDL3P58872 404 aa19.45■□□□□ 0.7
SPC24-206ENST00000592540 ZNF804AQ7Z570 1209 aa19.45■□□□□ 0.7
SPC24-206ENST00000592540 CROCCP2Q86T23 111 aa19.45■□□□□ 0.7
SPC24-206ENST00000592540 ALG3Q92685 438 aa19.45■□□□□ 0.7
SPC24-206ENST00000592540 ARHGEF26Q96DR7 871 aa19.45■□□□□ 0.7
SPC24-206ENST00000592540 FAXDC2Q96IV6 333 aa19.45■□□□□ 0.7
SPC24-206ENST00000592540 RSRC1Q96IZ7 334 aaKnown RBP19.45■□□□□ 0.7
SPC24-206ENST00000592540 NSRP1Q9H0G5 558 aaKnown RBP19.45■□□□□ 0.7
SPC24-206ENST00000592540 ABCF3Q9NUQ8 709 aa19.45■□□□□ 0.7
SPC24-206ENST00000592540 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.45■□□□□ 0.7
SPC24-206ENST00000592540 AGAP1Q9UPQ3 857 aa19.45■□□□□ 0.7
SPC24-206ENST00000592540 PCDHB13Q9Y5F0 798 aa19.45■□□□□ 0.7
SPC24-206ENST00000592540 MEIS1O00470 390 aa19.44■□□□□ 0.7
SPC24-206ENST00000592540 KRT13P13646 458 aa19.44■□□□□ 0.7
SPC24-206ENST00000592540 PLCG2P16885 1265 aa19.44■□□□□ 0.7
SPC24-206ENST00000592540 VCAM1P19320 739 aa19.44■□□□□ 0.7
SPC24-206ENST00000592540 IFNAR2P48551 515 aa19.44■□□□□ 0.7
SPC24-206ENST00000592540 CLUL1Q15846 466 aa19.44■□□□□ 0.7
SPC24-206ENST00000592540 BMT2Q1RMZ1 405 aa19.44■□□□□ 0.7
SPC24-206ENST00000592540 SYT2Q8N9I0 419 aaPredicted RBP19.44■□□□□ 0.7
SPC24-206ENST00000592540 C18orf8Q96DM3 657 aa19.44■□□□□ 0.7
SPC24-206ENST00000592540 GPR101Q96P66 508 aaPredicted RBP19.44■□□□□ 0.7
SPC24-206ENST00000592540 SYT11Q9BT88 431 aa19.44■□□□□ 0.7
SPC24-206ENST00000592540 TMEM109Q9BVC6 243 aa19.44■□□□□ 0.7
SPC24-206ENST00000592540 DNM3Q9UQ16 869 aa19.44■□□□□ 0.7
SPC24-206ENST00000592540 FOCADQ5VW36 1801 aa19.44■□□□□ 0.7
SPC24-206ENST00000592540 COL24A1Q17RW2 1714 aa19.44■□□□□ 0.7
SPC24-206ENST00000592540 PHF2O75151 1096 aa19.43■□□□□ 0.7
SPC24-206ENST00000592540 RTN2O75298 545 aa19.43■□□□□ 0.7
SPC24-206ENST00000592540 PAX7P23759 505 aa19.43■□□□□ 0.7
SPC24-206ENST00000592540 RPL21P46778 160 aaKnown RBP19.43■□□□□ 0.7
SPC24-206ENST00000592540 SLC8A3P57103 927 aa19.43■□□□□ 0.7
SPC24-206ENST00000592540 MYO1EQ12965 1108 aa19.43■□□□□ 0.7
SPC24-206ENST00000592540 ZNF268Q14587 947 aaPredicted RBP19.43■□□□□ 0.7
SPC24-206ENST00000592540 NAA25Q14CX7 972 aa19.43■□□□□ 0.7
SPC24-206ENST00000592540 KIRREL3Q8IZU9 778 aa19.43■□□□□ 0.7
SPC24-206ENST00000592540 UHMK1Q8TAS1 419 aaKnown RBP19.43■□□□□ 0.7
SPC24-206ENST00000592540 CCHCR1Q8TD31 782 aa19.43■□□□□ 0.7
SPC24-206ENST00000592540 EPS8L3Q8TE67 593 aaKnown RBP19.43■□□□□ 0.7
SPC24-206ENST00000592540 STK33Q9BYT3 514 aa19.43■□□□□ 0.7
SPC24-206ENST00000592540 USP17L15C9J2P7 530 aa19.43■□□□□ 0.7
SPC24-206ENST00000592540 USP17L13C9JLJ4 530 aa19.43■□□□□ 0.7
SPC24-206ENST00000592540 USP17L11C9JVI0 530 aa19.43■□□□□ 0.7
SPC24-206ENST00000592540 USP17L18D6R9N7 530 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms