RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 CARNS1A5YM72 827 aa21.24■□□□□ 0.99
CCDC43-205ENST00000592333 DCXO43602 365 aa21.24■□□□□ 0.99
CCDC43-205ENST00000592333 TBX10O75333 385 aa21.24■□□□□ 0.99
CCDC43-205ENST00000592333 EOMESO95936 686 aa21.24■□□□□ 0.99
CCDC43-205ENST00000592333 DARSP14868 501 aaKnown RBP21.24■□□□□ 0.99
CCDC43-205ENST00000592333 XBP1P17861 261 aa21.24■□□□□ 0.99
CCDC43-205ENST00000592333 GATMP50440 423 aa21.24■□□□□ 0.99
CCDC43-205ENST00000592333 DNM2P50570 870 aa21.24■□□□□ 0.99
CCDC43-205ENST00000592333 GPC3P51654 580 aa21.24■□□□□ 0.99
CCDC43-205ENST00000592333 DLX2Q07687 328 aaPredicted RBP21.24■□□□□ 0.99
CCDC43-205ENST00000592333 TRMT1LQ7Z2T5 733 aaKnown RBP21.24■□□□□ 0.99
CCDC43-205ENST00000592333 MIER3Q7Z3K6 550 aa21.24■□□□□ 0.99
CCDC43-205ENST00000592333 KRT25Q7Z3Z0 450 aa21.24■□□□□ 0.99
CCDC43-205ENST00000592333 FAM122AQ96E09 287 aa21.24■□□□□ 0.99
CCDC43-205ENST00000592333 JPH2Q9BR39 696 aaPredicted RBP21.24■□□□□ 0.99
CCDC43-205ENST00000592333 IGFLR1Q9H665 355 aa21.24■□□□□ 0.99
CCDC43-205ENST00000592333 TLR9Q9NR96 1032 aa21.24■□□□□ 0.99
CCDC43-205ENST00000592333 CHST12Q9NRB3 414 aa21.24■□□□□ 0.99
CCDC43-205ENST00000592333 PDRG1Q9NUG6 133 aa21.24■□□□□ 0.99
CCDC43-205ENST00000592333 DACT1Q9NYF0 836 aa21.24■□□□□ 0.99
CCDC43-205ENST00000592333 PUF60Q9UHX1 559 aaKnown RBP21.24■□□□□ 0.99
CCDC43-205ENST00000592333 IGKV6-21A0A0C4DH24 114 aa21.23■□□□□ 0.99
CCDC43-205ENST00000592333 A0A0U1RQF3 1178 aa21.23■□□□□ 0.99
CCDC43-205ENST00000592333 DKC1O60832 514 aaKnown RBP eCLIP21.23■□□□□ 0.99
CCDC43-205ENST00000592333 PPFIA3O75145 1194 aa21.23■□□□□ 0.99
CCDC43-205ENST00000592333 FGF18O76093 207 aa21.23■□□□□ 0.99
CCDC43-205ENST00000592333 PPM1AP35813 382 aa21.23■□□□□ 0.99
CCDC43-205ENST00000592333 NDUFV1P49821 464 aa21.23■□□□□ 0.99
CCDC43-205ENST00000592333 NPY5RQ15761 445 aa21.23■□□□□ 0.99
CCDC43-205ENST00000592333 EXOC8Q8IYI6 725 aa21.23■□□□□ 0.99
CCDC43-205ENST00000592333 LRRC71Q8N4P6 559 aa21.23■□□□□ 0.99
CCDC43-205ENST00000592333 COLGALT1Q8NBJ5 622 aa21.23■□□□□ 0.99
CCDC43-205ENST00000592333 ETNPPLQ8TBG4 499 aa21.23■□□□□ 0.99
CCDC43-205ENST00000592333 FAM20AQ96MK3 541 aa21.23■□□□□ 0.99
CCDC43-205ENST00000592333 NAP1L4Q99733 375 aaKnown RBP21.23■□□□□ 0.99
CCDC43-205ENST00000592333 TRAIPQ9BWF2 469 aa21.23■□□□□ 0.99
CCDC43-205ENST00000592333 INO80BQ9C086 356 aaPredicted RBP21.23■□□□□ 0.99
CCDC43-205ENST00000592333 CWH43Q9H720 699 aa21.23■□□□□ 0.99
CCDC43-205ENST00000592333 PPME1Q9Y570 386 aa21.23■□□□□ 0.99
CCDC43-205ENST00000592333 CHMP2AO43633 222 aa21.22■□□□□ 0.99
CCDC43-205ENST00000592333 GCFC2P16383 781 aaKnown RBP21.22■□□□□ 0.99
CCDC43-205ENST00000592333 GTF2F1P35269 517 aaKnown RBP eCLIP21.22■□□□□ 0.99
CCDC43-205ENST00000592333 IRS1P35568 1242 aa21.22■□□□□ 0.99
CCDC43-205ENST00000592333 UGCGQ16739 394 aa21.22■□□□□ 0.99
CCDC43-205ENST00000592333 PPP4R3AQ6IN85 833 aa21.22■□□□□ 0.99
CCDC43-205ENST00000592333 THNSL1Q8IYQ7 743 aa21.22■□□□□ 0.99
CCDC43-205ENST00000592333 ABI1Q8IZP0 508 aa21.22■□□□□ 0.99
CCDC43-205ENST00000592333 LRRC43Q8N309 656 aa21.22■□□□□ 0.99
CCDC43-205ENST00000592333 SMRP1Q8NCR6 262 aa21.22■□□□□ 0.99
CCDC43-205ENST00000592333 CEP89Q96ST8 783 aa21.22■□□□□ 0.99
CCDC43-205ENST00000592333 TLE6Q9H808 572 aa21.22■□□□□ 0.99
CCDC43-205ENST00000592333 CLEC1BQ9P126 229 aa21.22■□□□□ 0.99
CCDC43-205ENST00000592333 STK36Q9NRP7 1315 aa21.22■□□□□ 0.99
CCDC43-205ENST00000592333 FSCN2O14926 492 aa21.21■□□□□ 0.99
CCDC43-205ENST00000592333 TBX3O15119 743 aa21.21■□□□□ 0.99
CCDC43-205ENST00000592333 TDP2O95551 362 aa21.21■□□□□ 0.99
CCDC43-205ENST00000592333 ANAPC15P60006 121 aa21.21■□□□□ 0.99
CCDC43-205ENST00000592333 PSMC5P62195 406 aa21.21■□□□□ 0.99
CCDC43-205ENST00000592333 ADGRD2Q7Z7M1 963 aa21.21■□□□□ 0.99
CCDC43-205ENST00000592333 ZNF410Q86VK4 478 aa21.21■□□□□ 0.99
CCDC43-205ENST00000592333 ECHDC2Q86YB7 292 aa21.21■□□□□ 0.99
CCDC43-205ENST00000592333 MICAL1Q8TDZ2 1067 aa21.21■□□□□ 0.99
CCDC43-205ENST00000592333 MRPS27Q92552 414 aaKnown RBP21.21■□□□□ 0.99
CCDC43-205ENST00000592333 CASD1Q96PB1 797 aa21.21■□□□□ 0.99
CCDC43-205ENST00000592333 PPP1R16BQ96T49 567 aa21.21■□□□□ 0.99
CCDC43-205ENST00000592333 PHF20Q9BVI0 1012 aa21.21■□□□□ 0.99
CCDC43-205ENST00000592333 GCOM2Q9BZD3 368 aaPredicted RBP21.21■□□□□ 0.99
CCDC43-205ENST00000592333 NGRNQ9NPE2 291 aaKnown RBP21.21■□□□□ 0.99
CCDC43-205ENST00000592333 DDX25Q9UHL0 483 aaKnown RBP21.21■□□□□ 0.99
CCDC43-205ENST00000592333 RAPGEFL1Q9UHV5 662 aa21.21■□□□□ 0.99
CCDC43-205ENST00000592333 LINC01565O15544 149 aa21.2■□□□□ 0.98
CCDC43-205ENST00000592333 MAFO75444 373 aaPredicted RBP21.2■□□□□ 0.98
CCDC43-205ENST00000592333 STBD1O95210 358 aa21.2■□□□□ 0.98
CCDC43-205ENST00000592333 SRGAP2BP0DMP2 458 aa21.2■□□□□ 0.98
CCDC43-205ENST00000592333 FGFR1P11362 822 aa21.2■□□□□ 0.98
CCDC43-205ENST00000592333 SKIP12755 728 aa21.2■□□□□ 0.98
CCDC43-205ENST00000592333 NRIP1P48552 1158 aa21.2■□□□□ 0.98
CCDC43-205ENST00000592333 KRT17Q04695 432 aa21.2■□□□□ 0.98
CCDC43-205ENST00000592333 PPP2R5CQ13362 524 aa21.2■□□□□ 0.98
CCDC43-205ENST00000592333 TMEM184AQ6ZMB5 413 aa21.2■□□□□ 0.98
CCDC43-205ENST00000592333 NLRP7Q8WX94 980 aa21.2■□□□□ 0.98
CCDC43-205ENST00000592333 SCLT1Q96NL6 688 aa21.2■□□□□ 0.98
CCDC43-205ENST00000592333 MRPL9Q9BYD2 267 aaKnown RBP21.2■□□□□ 0.98
CCDC43-205ENST00000592333 SEPT9Q9UHD8 586 aaPredicted RBP21.2■□□□□ 0.98
CCDC43-205ENST00000592333 PLXNA4Q9HCM2 1894 aa21.2■□□□□ 0.98
CCDC43-205ENST00000592333 EIF5BO60841 1220 aaKnown RBP21.19■□□□□ 0.98
CCDC43-205ENST00000592333 ANKRD1Q15327 319 aa21.19■□□□□ 0.98
CCDC43-205ENST00000592333 HERC4Q5GLZ8 1057 aaPredicted RBP21.19■□□□□ 0.98
CCDC43-205ENST00000592333 NEK8Q86SG6 692 aa21.19■□□□□ 0.98
CCDC43-205ENST00000592333 ZNF598Q86UK7 904 aaKnown RBP21.19■□□□□ 0.98
CCDC43-205ENST00000592333 WASF1Q92558 559 aa21.19■□□□□ 0.98
CCDC43-205ENST00000592333 ZNF558Q96NG5 402 aa21.19■□□□□ 0.98
CCDC43-205ENST00000592333 KCNH6Q9H252 994 aa21.19■□□□□ 0.98
CCDC43-205ENST00000592333 SLKQ9H2G2 1235 aaPredicted RBP21.19■□□□□ 0.98
CCDC43-205ENST00000592333 KCNMB3Q9NPA1 279 aa21.19■□□□□ 0.98
CCDC43-205ENST00000592333 CCDC194A0A1B0GVG4 234 aa21.18■□□□□ 0.98
CCDC43-205ENST00000592333 ATF7P17544 494 aaPredicted RBP21.18■□□□□ 0.98
CCDC43-205ENST00000592333 SFPQP23246 707 aaKnown RBP eCLIP21.18■□□□□ 0.98
CCDC43-205ENST00000592333 DUSP6Q16828 381 aa21.18■□□□□ 0.98
CCDC43-205ENST00000592333 INF2Q27J81 1249 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms