RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 GTPBP6O43824 516 aaPredicted RBP30.46■■■□□ 2.47
SMAD4-213ENST00000591914 GJB2P29033 226 aa30.46■■■□□ 2.47
SMAD4-213ENST00000591914 RFC5P40937 340 aa30.46■■■□□ 2.47
SMAD4-213ENST00000591914 EXOC8Q8IYI6 725 aa30.46■■■□□ 2.47
SMAD4-213ENST00000591914 GDPD5Q8WTR4 605 aa30.46■■■□□ 2.47
SMAD4-213ENST00000591914 NLRP7Q8WX94 980 aa30.46■■■□□ 2.47
SMAD4-213ENST00000591914 SLC7A3Q8WY07 619 aa30.46■■■□□ 2.47
SMAD4-213ENST00000591914 C1orf112Q9NSG2 853 aa30.46■■■□□ 2.47
SMAD4-213ENST00000591914 SUCLA2Q9P2R7 463 aaPredicted RBP30.46■■■□□ 2.47
SMAD4-213ENST00000591914 DENND3A2RUS2 1198 aa30.45■■■□□ 2.47
SMAD4-213ENST00000591914 POTEMA6NI47 508 aa30.45■■■□□ 2.47
SMAD4-213ENST00000591914 ZBTB39O15060 712 aa30.45■■■□□ 2.47
SMAD4-213ENST00000591914 OR52Z1P0C646 297 aa30.45■■■□□ 2.47
SMAD4-213ENST00000591914 STAG3L1P0CL83 205 aa30.45■■■□□ 2.47
SMAD4-213ENST00000591914 SARSP49591 514 aaKnown RBP30.45■■■□□ 2.47
SMAD4-213ENST00000591914 DSC3Q14574 896 aa30.45■■■□□ 2.47
SMAD4-213ENST00000591914 FIBCD1Q8N539 461 aa30.45■■■□□ 2.47
SMAD4-213ENST00000591914 PPM1EQ8WY54 764 aa30.45■■■□□ 2.47
SMAD4-213ENST00000591914 SCLT1Q96NL6 688 aa30.45■■■□□ 2.47
SMAD4-213ENST00000591914 PRRC2BQ5JSZ5 2229 aaKnown RBP30.45■■■□□ 2.46
SMAD4-213ENST00000591914 RALGAPA2Q2PPJ7 1873 aa30.44■■■□□ 2.46
SMAD4-213ENST00000591914 C9IYK1 514 aa30.44■■■□□ 2.46
SMAD4-213ENST00000591914 POLGP54098 1239 aaPredicted RBP30.44■■■□□ 2.46
SMAD4-213ENST00000591914 CCDC85BQ15834 202 aaPredicted RBP30.44■■■□□ 2.46
SMAD4-213ENST00000591914 EPC2Q52LR7 807 aa30.44■■■□□ 2.46
SMAD4-213ENST00000591914 SLC24A5Q71RS6 500 aa30.44■■■□□ 2.46
SMAD4-213ENST00000591914 FBXO22Q8NEZ5 403 aa30.44■■■□□ 2.46
SMAD4-213ENST00000591914 NLRC5Q86WI3 1866 aa30.44■■■□□ 2.46
SMAD4-213ENST00000591914 LINC00271P0C7V0 271 aa30.43■■■□□ 2.46
SMAD4-213ENST00000591914 TOB1P50616 345 aaPredicted RBP30.43■■■□□ 2.46
SMAD4-213ENST00000591914 XKR9Q5GH70 373 aa30.43■■■□□ 2.46
SMAD4-213ENST00000591914 ZNF410Q86VK4 478 aa30.43■■■□□ 2.46
SMAD4-213ENST00000591914 RHPN2Q8IUC4 686 aa30.43■■■□□ 2.46
SMAD4-213ENST00000591914 C4orf32Q8N8J7 132 aa30.43■■■□□ 2.46
SMAD4-213ENST00000591914 GCOM2Q9BZD3 368 aaPredicted RBP30.43■■■□□ 2.46
SMAD4-213ENST00000591914 LMCD1Q9NZU5 365 aa30.43■■■□□ 2.46
SMAD4-213ENST00000591914 ZSCAN21Q9Y5A6 473 aaPredicted RBP30.43■■■□□ 2.46
SMAD4-213ENST00000591914 GAS2O43903 313 aaKnown RBP30.42■■■□□ 2.46
SMAD4-213ENST00000591914 NBR1Q14596 966 aa30.42■■■□□ 2.46
SMAD4-213ENST00000591914 TMEM192Q8IY95 271 aa30.42■■■□□ 2.46
SMAD4-213ENST00000591914 CLP1Q92989 425 aaKnown RBP30.42■■■□□ 2.46
SMAD4-213ENST00000591914 ANKEF1Q9NU02 776 aa30.42■■■□□ 2.46
SMAD4-213ENST00000591914 RNF216Q9NWF9 866 aaPredicted RBP30.42■■■□□ 2.46
SMAD4-213ENST00000591914 SMC3Q9UQE7 1217 aa30.42■■■□□ 2.46
SMAD4-213ENST00000591914 GTF3C3Q9Y5Q9 886 aa30.42■■■□□ 2.46
SMAD4-213ENST00000591914 A0A087WZ62 844 aa30.41■■■□□ 2.46
SMAD4-213ENST00000591914 SPATA31C1P0DKV0 1188 aa30.41■■■□□ 2.46
SMAD4-213ENST00000591914 TECP42680 631 aa30.41■■■□□ 2.46
SMAD4-213ENST00000591914 FAM189BP81408 668 aa30.41■■■□□ 2.46
SMAD4-213ENST00000591914 BTG3Q14201 252 aaPredicted RBP30.41■■■□□ 2.46
SMAD4-213ENST00000591914 EMC2Q15006 297 aa30.41■■■□□ 2.46
SMAD4-213ENST00000591914 CMTR2Q8IYT2 770 aaKnown RBP30.41■■■□□ 2.46
SMAD4-213ENST00000591914 MICALL1Q8N3F8 863 aa30.41■■■□□ 2.46
SMAD4-213ENST00000591914 FDXACB1Q9BRP7 624 aaPredicted RBP30.41■■■□□ 2.46
SMAD4-213ENST00000591914 LRFN2Q9ULH4 789 aa30.41■■■□□ 2.46
SMAD4-213ENST00000591914 KSR1Q8IVT5 923 aa30.4■■■□□ 2.46
SMAD4-213ENST00000591914 TUFT1Q9NNX1 390 aa30.4■■■□□ 2.46
SMAD4-213ENST00000591914 PCDHB7Q9Y5E2 793 aa30.4■■■□□ 2.46
SMAD4-213ENST00000591914 COL4A3BPQ9Y5P4 624 aa30.4■■■□□ 2.46
SMAD4-213ENST00000591914 CSDE1O75534 798 aaKnown RBP30.39■■■□□ 2.46
SMAD4-213ENST00000591914 FGFR4P22455 802 aa30.39■■■□□ 2.46
SMAD4-213ENST00000591914 CUL4AQ13619 759 aa30.39■■■□□ 2.46
SMAD4-213ENST00000591914 MCTP1Q6DN14 999 aa30.39■■■□□ 2.46
SMAD4-213ENST00000591914 CATSPER3Q86XQ3 398 aa30.39■■■□□ 2.46
SMAD4-213ENST00000591914 PRPF31Q8WWY3 499 aaKnown RBP30.39■■■□□ 2.46
SMAD4-213ENST00000591914 PSPC1Q8WXF1 523 aaKnown RBP30.39■■■□□ 2.46
SMAD4-213ENST00000591914 TMEM143Q96AN5 459 aa30.39■■■□□ 2.46
SMAD4-213ENST00000591914 NLRP4Q96MN2 994 aa30.39■■■□□ 2.46
SMAD4-213ENST00000591914 ELAC1Q9H777 363 aaKnown RBP30.39■■■□□ 2.46
SMAD4-213ENST00000591914 PRDM6Q9NQX0 595 aa30.39■■■□□ 2.46
SMAD4-213ENST00000591914 RWDD3Q9Y3V2 267 aa30.39■■■□□ 2.46
SMAD4-213ENST00000591914 PCDHB6Q9Y5E3 794 aa30.39■■■□□ 2.46
SMAD4-213ENST00000591914 C5orf67F2Z3F1 127 aa30.38■■■□□ 2.45
SMAD4-213ENST00000591914 H3BNC9 293 aa30.38■■■□□ 2.45
SMAD4-213ENST00000591914 XRCC6P12956 609 aaKnown RBP eCLIP30.38■■■□□ 2.45
SMAD4-213ENST00000591914 ZSCAN20P17040 1043 aaPredicted RBP30.38■■■□□ 2.45
SMAD4-213ENST00000591914 FXR2P51116 673 aaKnown RBP eCLIP30.38■■■□□ 2.45
SMAD4-213ENST00000591914 TCP11Q8WWU5 503 aa30.38■■■□□ 2.45
SMAD4-213ENST00000591914 POLR3CQ9BUI4 534 aaPredicted RBP30.38■■■□□ 2.45
SMAD4-213ENST00000591914 INO80BQ9C086 356 aaPredicted RBP30.38■■■□□ 2.45
SMAD4-213ENST00000591914 IFT122Q9HBG6 1241 aa30.38■■■□□ 2.45
SMAD4-213ENST00000591914 BMP2KQ9NSY1 1161 aaPredicted RBP30.38■■■□□ 2.45
SMAD4-213ENST00000591914 TMEM161AQ9NX61 479 aa30.38■■■□□ 2.45
SMAD4-213ENST00000591914 H3BQV1 296 aa30.37■■■□□ 2.45
SMAD4-213ENST00000591914 MED24O75448 989 aa30.37■■■□□ 2.45
SMAD4-213ENST00000591914 SFPQP23246 707 aaKnown RBP eCLIP30.37■■■□□ 2.45
SMAD4-213ENST00000591914 CTNNB1P35222 781 aa30.37■■■□□ 2.45
SMAD4-213ENST00000591914 BMPR1AP36894 532 aa30.37■■■□□ 2.45
SMAD4-213ENST00000591914 RARRES1P49788 294 aa30.37■■■□□ 2.45
SMAD4-213ENST00000591914 GATMP50440 423 aa30.37■■■□□ 2.45
SMAD4-213ENST00000591914 PTGDRQ13258 359 aa30.37■■■□□ 2.45
SMAD4-213ENST00000591914 PIGOQ8TEQ8 1089 aa30.37■■■□□ 2.45
SMAD4-213ENST00000591914 MTRQ99707 1265 aa30.37■■■□□ 2.45
SMAD4-213ENST00000591914 XPNPEP1Q9NQW7 623 aa30.37■■■□□ 2.45
SMAD4-213ENST00000591914 MRPL42Q9Y6G3 142 aaKnown RBP30.37■■■□□ 2.45
SMAD4-213ENST00000591914 RB1P06400 928 aa30.36■■■□□ 2.45
SMAD4-213ENST00000591914 IBSPP21815 317 aaPredicted RBP30.36■■■□□ 2.45
SMAD4-213ENST00000591914 LAMTOR4Q0VGL1 99 aa30.36■■■□□ 2.45
SMAD4-213ENST00000591914 ERMNQ8TAM6 284 aa30.36■■■□□ 2.45
SMAD4-213ENST00000591914 DGAT1O75907 488 aa30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms