RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 MICU3Q86XE3 530 aa10.72□□□□□ -0.69
BRCA1-226ENST00000591534 CMTR1Q8N1G2 835 aaKnown RBP10.72□□□□□ -0.69
BRCA1-226ENST00000591534 OSBPL7Q9BZF2 842 aa10.72□□□□□ -0.69
BRCA1-226ENST00000591534 RC3H2Q9HBD1 1191 aaKnown RBP10.72□□□□□ -0.69
BRCA1-226ENST00000591534 RIC8AQ9NPQ8 531 aa10.72□□□□□ -0.69
BRCA1-226ENST00000591534 ANO2Q9NQ90 1003 aa10.72□□□□□ -0.69
BRCA1-226ENST00000591534 C1orf112Q9NSG2 853 aa10.72□□□□□ -0.69
BRCA1-226ENST00000591534 PLA2G2EQ9NZK7 142 aa10.72□□□□□ -0.69
BRCA1-226ENST00000591534 TFIP11Q9UBB9 837 aaKnown RBP10.72□□□□□ -0.69
BRCA1-226ENST00000591534 HCSTQ9UBK5 93 aa10.72□□□□□ -0.69
BRCA1-226ENST00000591534 PADI3Q9ULW8 664 aa10.72□□□□□ -0.69
BRCA1-226ENST00000591534 IGSF9BQ9UPX0 1349 aa10.72□□□□□ -0.69
BRCA1-226ENST00000591534 KDM3AQ9Y4C1 1321 aa10.72□□□□□ -0.69
BRCA1-226ENST00000591534 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.71□□□□□ -0.69
BRCA1-226ENST00000591534 CCDC196A0A1B0GTZ2 297 aa10.71□□□□□ -0.69
BRCA1-226ENST00000591534 DENND3A2RUS2 1198 aa10.71□□□□□ -0.69
BRCA1-226ENST00000591534 STXBP3O00186 592 aa10.71□□□□□ -0.69
BRCA1-226ENST00000591534 GPR182O15218 404 aa10.71□□□□□ -0.69
BRCA1-226ENST00000591534 ZBTB43O43298 467 aa10.71□□□□□ -0.69
BRCA1-226ENST00000591534 MBTPS2O43462 519 aa10.71□□□□□ -0.69
BRCA1-226ENST00000591534 RXRAP19793 462 aa10.71□□□□□ -0.69
BRCA1-226ENST00000591534 LTBRP36941 435 aa10.71□□□□□ -0.69
BRCA1-226ENST00000591534 SARSP49591 514 aaKnown RBP10.71□□□□□ -0.69
BRCA1-226ENST00000591534 NFX1Q12986 1120 aaKnown RBP10.71□□□□□ -0.69
BRCA1-226ENST00000591534 PTPRSQ13332 1948 aa10.71□□□□□ -0.69
BRCA1-226ENST00000591534 ADAM15Q13444 863 aa10.71□□□□□ -0.69
BRCA1-226ENST00000591534 PLCB4Q15147 1175 aa10.71□□□□□ -0.69
BRCA1-226ENST00000591534 SPOUT1Q5T280 376 aaKnown RBP10.71□□□□□ -0.69
BRCA1-226ENST00000591534 MIS18BP1Q6P0N0 1132 aa10.71□□□□□ -0.69
BRCA1-226ENST00000591534 MTHFD1LQ6UB35 978 aa10.71□□□□□ -0.69
BRCA1-226ENST00000591534 NIPA1Q7RTP0 329 aa10.71□□□□□ -0.69
BRCA1-226ENST00000591534 MICAL3Q7RTP6 2002 aa10.71□□□□□ -0.69
BRCA1-226ENST00000591534 EFHBQ8N7U6 833 aa10.71□□□□□ -0.69
BRCA1-226ENST00000591534 MICAL1Q8TDZ2 1067 aa10.71□□□□□ -0.69
BRCA1-226ENST00000591534 CCDC12Q8WUD4 166 aaPredicted RBP10.71□□□□□ -0.69
BRCA1-226ENST00000591534 AGO3Q9H9G7 860 aaKnown RBP10.71□□□□□ -0.69
BRCA1-226ENST00000591534 AGO4Q9HCK5 861 aaKnown RBP10.71□□□□□ -0.69
BRCA1-226ENST00000591534 ALG13Q9NP73 1137 aaKnown RBP10.71□□□□□ -0.69
BRCA1-226ENST00000591534 TELO2Q9Y4R8 837 aa10.71□□□□□ -0.69
BRCA1-226ENST00000591534 MRPL42Q9Y6G3 142 aaKnown RBP10.71□□□□□ -0.69
BRCA1-226ENST00000591534 COL1A2P08123 1366 aa10.7□□□□□ -0.7
BRCA1-226ENST00000591534 hCG_1642624A0A1W2PR95 340 aa10.7□□□□□ -0.7
BRCA1-226ENST00000591534 SMCO2A6NFE2 343 aa10.7□□□□□ -0.7
BRCA1-226ENST00000591534 MEIS1O00470 390 aa10.7□□□□□ -0.7
BRCA1-226ENST00000591534 RPS6KA5O75582 802 aa10.7□□□□□ -0.7
BRCA1-226ENST00000591534 REC8O95072 547 aa10.7□□□□□ -0.7
BRCA1-226ENST00000591534 S1PR4O95977 384 aa10.7□□□□□ -0.7
BRCA1-226ENST00000591534 HMGB1P09429 215 aaKnown RBP10.7□□□□□ -0.7
BRCA1-226ENST00000591534 LINC00271P0C7V0 271 aa10.7□□□□□ -0.7
BRCA1-226ENST00000591534 KLRC1P26715 233 aa10.7□□□□□ -0.7
BRCA1-226ENST00000591534 FGD1P98174 961 aa10.7□□□□□ -0.7
BRCA1-226ENST00000591534 TMEM62Q0P6H9 643 aa10.7□□□□□ -0.7
BRCA1-226ENST00000591534 KRT32Q14532 448 aa10.7□□□□□ -0.7
BRCA1-226ENST00000591534 CLUL1Q15846 466 aa10.7□□□□□ -0.7
BRCA1-226ENST00000591534 RTN1Q16799 776 aa10.7□□□□□ -0.7
BRCA1-226ENST00000591534 HERC4Q5GLZ8 1057 aaPredicted RBP10.7□□□□□ -0.7
BRCA1-226ENST00000591534 ZNF484Q5JVG2 852 aa10.7□□□□□ -0.7
BRCA1-226ENST00000591534 SLC24A5Q71RS6 500 aa10.7□□□□□ -0.7
BRCA1-226ENST00000591534 CKAP2LQ8IYA6 745 aa10.7□□□□□ -0.7
BRCA1-226ENST00000591534 KLHL23Q8NBE8 558 aa10.7□□□□□ -0.7
BRCA1-226ENST00000591534 SPPL3Q8TCT6 385 aa10.7□□□□□ -0.7
BRCA1-226ENST00000591534 ATP8B4Q8TF62 1192 aa10.7□□□□□ -0.7
BRCA1-226ENST00000591534 POF1BQ8WVV4 589 aa10.7□□□□□ -0.7
BRCA1-226ENST00000591534 NEK1Q96PY6 1258 aa10.7□□□□□ -0.7
BRCA1-226ENST00000591534 CDCA3Q99618 268 aaPredicted RBP10.7□□□□□ -0.7
BRCA1-226ENST00000591534 PRRX2Q99811 253 aa10.7□□□□□ -0.7
BRCA1-226ENST00000591534 OCSTAMPQ9BR26 566 aa10.7□□□□□ -0.7
BRCA1-226ENST00000591534 ANO3Q9BYT9 981 aa10.7□□□□□ -0.7
BRCA1-226ENST00000591534 TLE6Q9H808 572 aa10.7□□□□□ -0.7
BRCA1-226ENST00000591534 TBC1D22BQ9NU19 505 aa10.7□□□□□ -0.7
BRCA1-226ENST00000591534 PUF60Q9UHX1 559 aaKnown RBP10.7□□□□□ -0.7
BRCA1-226ENST00000591534 CEP131Q9UPN4 1083 aa10.7□□□□□ -0.7
BRCA1-226ENST00000591534 GINS2Q9Y248 185 aa10.7□□□□□ -0.7
BRCA1-226ENST00000591534 CDC45O75419 566 aa10.69□□□□□ -0.7
BRCA1-226ENST00000591534 CSPG5O95196 566 aa10.69□□□□□ -0.7
BRCA1-226ENST00000591534 ATG7O95352 703 aa10.69□□□□□ -0.7
BRCA1-226ENST00000591534 EYA4O95677 639 aa10.69□□□□□ -0.7
BRCA1-226ENST00000591534 ITGB1P05556 798 aa10.69□□□□□ -0.7
BRCA1-226ENST00000591534 PDIA4P13667 645 aaKnown RBP10.69□□□□□ -0.7
BRCA1-226ENST00000591534 TMOD1P28289 359 aa10.69□□□□□ -0.7
BRCA1-226ENST00000591534 IRS1P35568 1242 aa10.69□□□□□ -0.7
BRCA1-226ENST00000591534 SREBF1P36956 1147 aa10.69□□□□□ -0.7
BRCA1-226ENST00000591534 RCAN1P53805 252 aa10.69□□□□□ -0.7
BRCA1-226ENST00000591534 SETQ01105 290 aaPredicted RBP10.69□□□□□ -0.7
BRCA1-226ENST00000591534 COASYQ13057 564 aa10.69□□□□□ -0.7
BRCA1-226ENST00000591534 NECTIN1Q15223 517 aa10.69□□□□□ -0.7
BRCA1-226ENST00000591534 PAN2Q504Q3 1202 aaKnown RBP10.69□□□□□ -0.7
BRCA1-226ENST00000591534 WWC2Q6AWC2 1192 aa10.69□□□□□ -0.7
BRCA1-226ENST00000591534 PDXDC2PQ6P474 469 aa10.69□□□□□ -0.7
BRCA1-226ENST00000591534 APOA5Q6Q788 366 aa10.69□□□□□ -0.7
BRCA1-226ENST00000591534 DHX32Q7L7V1 743 aaKnown RBP10.69□□□□□ -0.7
BRCA1-226ENST00000591534 PCYT2Q99447 389 aa10.69□□□□□ -0.7
BRCA1-226ENST00000591534 ATP6V0A4Q9HBG4 840 aa10.69□□□□□ -0.7
BRCA1-226ENST00000591534 ZNF302Q9NR11 478 aa10.69□□□□□ -0.7
BRCA1-226ENST00000591534 BARHL2Q9NY43 387 aa10.69□□□□□ -0.7
BRCA1-226ENST00000591534 V9GY48 417 aaPredicted RBP10.69□□□□□ -0.7
BRCA1-226ENST00000591534 IGKV6D-21A0A0A0MT36 114 aa10.68□□□□□ -0.7
BRCA1-226ENST00000591534 IPO5O00410 1097 aaKnown RBP10.68□□□□□ -0.7
BRCA1-226ENST00000591534 MAGEB2O15479 319 aa10.68□□□□□ -0.7
BRCA1-226ENST00000591534 ARP10275 920 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms