RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 RPS6KA5O75582 802 aa12.86□□□□□ -0.35
VMP1-211ENST00000591315 CA3P07451 260 aa12.86□□□□□ -0.35
VMP1-211ENST00000591315 RPA1P27694 616 aa12.86□□□□□ -0.35
VMP1-211ENST00000591315 TMOD1P28289 359 aa12.86□□□□□ -0.35
VMP1-211ENST00000591315 RARRES1P49788 294 aa12.86□□□□□ -0.35
VMP1-211ENST00000591315 POLGP54098 1239 aaPredicted RBP12.86□□□□□ -0.35
VMP1-211ENST00000591315 CEBPZQ03701 1054 aaKnown RBP12.86□□□□□ -0.35
VMP1-211ENST00000591315 PAK2Q13177 524 aa12.86□□□□□ -0.35
VMP1-211ENST00000591315 GRIN2CQ14957 1233 aa12.86□□□□□ -0.35
VMP1-211ENST00000591315 FOXD4L6Q3SYB3 417 aaPredicted RBP12.86□□□□□ -0.35
VMP1-211ENST00000591315 ZNF697Q5TEC3 545 aa12.86□□□□□ -0.35
VMP1-211ENST00000591315 FOXD4L3Q6VB84 417 aaPredicted RBP12.86□□□□□ -0.35
VMP1-211ENST00000591315 DTHD1Q6ZMT9 781 aa12.86□□□□□ -0.35
VMP1-211ENST00000591315 MAEAQ7L5Y9 396 aa12.86□□□□□ -0.35
VMP1-211ENST00000591315 OTUD6AQ7L8S5 288 aa12.86□□□□□ -0.35
VMP1-211ENST00000591315 KCNK18Q7Z418 384 aa12.86□□□□□ -0.35
VMP1-211ENST00000591315 BRAPQ7Z569 592 aa12.86□□□□□ -0.35
VMP1-211ENST00000591315 RHPN2Q8IUC4 686 aa12.86□□□□□ -0.35
VMP1-211ENST00000591315 PHOSPHO2Q8TCD6 241 aa12.86□□□□□ -0.35
VMP1-211ENST00000591315 PRPF31Q8WWY3 499 aaKnown RBP12.86□□□□□ -0.35
VMP1-211ENST00000591315 PLIN2Q99541 437 aa12.86□□□□□ -0.35
VMP1-211ENST00000591315 FDXACB1Q9BRP7 624 aaPredicted RBP12.86□□□□□ -0.35
VMP1-211ENST00000591315 ZNF576Q9H609 170 aa12.86□□□□□ -0.35
VMP1-211ENST00000591315 GPRC5CQ9NQ84 441 aa12.86□□□□□ -0.35
VMP1-211ENST00000591315 ANKEF1Q9NU02 776 aa12.86□□□□□ -0.35
VMP1-211ENST00000591315 MSRAQ9UJ68 235 aa12.86□□□□□ -0.35
VMP1-211ENST00000591315 PCDHA11Q9Y5I1 949 aa12.86□□□□□ -0.35
VMP1-211ENST00000591315 MYO7AQ13402 2215 aa12.86□□□□□ -0.35
VMP1-211ENST00000591315 RFXAPO00287 272 aa12.85□□□□□ -0.35
VMP1-211ENST00000591315 TLL1O43897 1013 aa12.85□□□□□ -0.35
VMP1-211ENST00000591315 USO1O60763 962 aaKnown RBP12.85□□□□□ -0.35
VMP1-211ENST00000591315 GJB5O95377 273 aa12.85□□□□□ -0.35
VMP1-211ENST00000591315 HSP90AA1P07900 732 aaKnown RBP12.85□□□□□ -0.35
VMP1-211ENST00000591315 SRGAP2CP0DJJ0 459 aa12.85□□□□□ -0.35
VMP1-211ENST00000591315 PRPHP41219 470 aa12.85□□□□□ -0.35
VMP1-211ENST00000591315 GATMP50440 423 aa12.85□□□□□ -0.35
VMP1-211ENST00000591315 PDIA5Q14554 519 aa12.85□□□□□ -0.35
VMP1-211ENST00000591315 PTPAQ15257 358 aa12.85□□□□□ -0.35
VMP1-211ENST00000591315 ZRSR1Q15695 479 aaKnown RBP12.85□□□□□ -0.35
VMP1-211ENST00000591315 RAB30Q15771 203 aa12.85□□□□□ -0.35
VMP1-211ENST00000591315 GPR153Q6NV75 609 aa12.85□□□□□ -0.35
VMP1-211ENST00000591315 ASAP3Q8TDY4 903 aa12.85□□□□□ -0.35
VMP1-211ENST00000591315 SNX29Q8TEQ0 813 aa12.85□□□□□ -0.35
VMP1-211ENST00000591315 LRRC15Q8TF66 581 aa12.85□□□□□ -0.35
VMP1-211ENST00000591315 NLRP7Q8WX94 980 aa12.85□□□□□ -0.35
VMP1-211ENST00000591315 APBB2Q92870 758 aa12.85□□□□□ -0.35
VMP1-211ENST00000591315 NLRP4Q96MN2 994 aa12.85□□□□□ -0.35
VMP1-211ENST00000591315 SCLT1Q96NL6 688 aa12.85□□□□□ -0.35
VMP1-211ENST00000591315 PNMA5Q96PV4 448 aa12.85□□□□□ -0.35
VMP1-211ENST00000591315 USP28Q96RU2 1077 aa12.85□□□□□ -0.35
VMP1-211ENST00000591315 ZBED2Q9BTP6 218 aa12.85□□□□□ -0.35
VMP1-211ENST00000591315 MINDY3Q9H8M7 445 aa12.85□□□□□ -0.35
VMP1-211ENST00000591315 DDX19AQ9NUU7 478 aaKnown RBP12.85□□□□□ -0.35
VMP1-211ENST00000591315 KIAA1024Q9UPX6 916 aa12.85□□□□□ -0.35
VMP1-211ENST00000591315 SQORQ9Y6N5 450 aa12.85□□□□□ -0.35
VMP1-211ENST00000591315 EPOPA6NHQ4 379 aa12.84□□□□□ -0.35
VMP1-211ENST00000591315 E9PMD0 336 aa12.84□□□□□ -0.35
VMP1-211ENST00000591315 LAD1O00515 517 aa12.84□□□□□ -0.35
VMP1-211ENST00000591315 AMHP03971 560 aa12.84□□□□□ -0.35
VMP1-211ENST00000591315 RPLP2P05387 115 aaKnown RBP12.84□□□□□ -0.35
VMP1-211ENST00000591315 DARSP14868 501 aaKnown RBP12.84□□□□□ -0.35
VMP1-211ENST00000591315 EIF4BP23588 611 aaKnown RBP12.84□□□□□ -0.35
VMP1-211ENST00000591315 MARCKSP29966 332 aaPredicted RBP12.84□□□□□ -0.35
VMP1-211ENST00000591315 RFC5P40937 340 aa12.84□□□□□ -0.35
VMP1-211ENST00000591315 TAP1Q03518 808 aa12.84□□□□□ -0.35
VMP1-211ENST00000591315 LAMTOR4Q0VGL1 99 aa12.84□□□□□ -0.35
VMP1-211ENST00000591315 DSC3Q14574 896 aa12.84□□□□□ -0.35
VMP1-211ENST00000591315 USP49Q70CQ1 688 aa12.84□□□□□ -0.35
VMP1-211ENST00000591315 USP38Q8NB14 1042 aa12.84□□□□□ -0.35
VMP1-211ENST00000591315 ERMNQ8TAM6 284 aa12.84□□□□□ -0.35
VMP1-211ENST00000591315 SLC7A3Q8WY07 619 aa12.84□□□□□ -0.35
VMP1-211ENST00000591315 MYLIPQ8WY64 445 aa12.84□□□□□ -0.35
VMP1-211ENST00000591315 TOP1MTQ969P6 601 aa12.84□□□□□ -0.35
VMP1-211ENST00000591315 CHAMP1Q96JM3 812 aa12.84□□□□□ -0.35
VMP1-211ENST00000591315 NACC1Q96RE7 527 aa12.84□□□□□ -0.35
VMP1-211ENST00000591315 CDX2Q99626 313 aaPredicted RBP12.84□□□□□ -0.35
VMP1-211ENST00000591315 MTRQ99707 1265 aa12.84□□□□□ -0.35
VMP1-211ENST00000591315 ADAM2Q99965 735 aa12.84□□□□□ -0.35
VMP1-211ENST00000591315 TFIP11Q9UBB9 837 aaKnown RBP12.84□□□□□ -0.35
VMP1-211ENST00000591315 COL4A3BPQ9Y5P4 624 aa12.84□□□□□ -0.35
VMP1-211ENST00000591315 PRRC2BQ5JSZ5 2229 aaKnown RBP12.84□□□□□ -0.35
VMP1-211ENST00000591315 COL4A6Q14031 1691 aa12.83□□□□□ -0.35
VMP1-211ENST00000591315 EFCAB14O75071 495 aa12.83□□□□□ -0.36
VMP1-211ENST00000591315 SLC34A2O95436 690 aa12.83□□□□□ -0.36
VMP1-211ENST00000591315 XRCC6P12956 609 aaKnown RBP eCLIP12.83□□□□□ -0.36
VMP1-211ENST00000591315 ARL2P36404 184 aa12.83□□□□□ -0.36
VMP1-211ENST00000591315 DNM2P50570 870 aa12.83□□□□□ -0.36
VMP1-211ENST00000591315 GRB10Q13322 594 aa12.83□□□□□ -0.36
VMP1-211ENST00000591315 SPECC1Q5M775 1068 aa12.83□□□□□ -0.36
VMP1-211ENST00000591315 PPP2R2DQ66LE6 453 aa12.83□□□□□ -0.36
VMP1-211ENST00000591315 PADI6Q6TGC4 694 aa12.83□□□□□ -0.36
VMP1-211ENST00000591315 PSPC1Q8WXF1 523 aaKnown RBP12.83□□□□□ -0.36
VMP1-211ENST00000591315 BSNDQ8WZ55 320 aa12.83□□□□□ -0.36
VMP1-211ENST00000591315 CLIC6Q96NY7 704 aa12.83□□□□□ -0.36
VMP1-211ENST00000591315 RAD9AQ99638 391 aa12.83□□□□□ -0.36
VMP1-211ENST00000591315 TSPYL2Q9H2G4 693 aaPredicted RBP12.83□□□□□ -0.36
VMP1-211ENST00000591315 BHMT2Q9H2M3 363 aa12.83□□□□□ -0.36
VMP1-211ENST00000591315 PRDM12Q9H4Q4 367 aa12.83□□□□□ -0.36
VMP1-211ENST00000591315 SLC28A3Q9HAS3 691 aa12.83□□□□□ -0.36
VMP1-211ENST00000591315 ATP6V0A4Q9HBG4 840 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms