RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 TDRD10Q5VZ19 366 aaKnown RBP12.34□□□□□ -0.43
SEH1L-208ENST00000590843 ISM2Q6H9L7 571 aa12.34□□□□□ -0.43
SEH1L-208ENST00000590843 SKA2Q8WVK7 121 aaPredicted RBP12.34□□□□□ -0.43
SEH1L-208ENST00000590843 SEPT5Q99719 369 aaPredicted RBP12.34□□□□□ -0.43
SEH1L-208ENST00000590843 STMN4Q9H169 189 aaPredicted RBP12.34□□□□□ -0.43
SEH1L-208ENST00000590843 SRRDQ9UH36 339 aa12.34□□□□□ -0.43
SEH1L-208ENST00000590843 DDX20Q9UHI6 824 aaKnown RBP12.34□□□□□ -0.43
SEH1L-208ENST00000590843 USTQ9Y2C2 406 aa12.34□□□□□ -0.43
SEH1L-208ENST00000590843 SYNJ2BP-COX16A0A087WUM0 186 aa12.34□□□□□ -0.43
SEH1L-208ENST00000590843 SYCE3A1L190 88 aa12.34□□□□□ -0.43
SEH1L-208ENST00000590843 EIF3CLB5ME19 914 aaKnown RBP12.34□□□□□ -0.43
SEH1L-208ENST00000590843 ADCYAP1R1P41586 468 aa12.34□□□□□ -0.43
SEH1L-208ENST00000590843 GIT2Q14161 759 aa12.34□□□□□ -0.43
SEH1L-208ENST00000590843 PFKFB3Q16875 520 aaPredicted RBP12.34□□□□□ -0.43
SEH1L-208ENST00000590843 METTL7BQ6UX53 244 aa12.34□□□□□ -0.43
SEH1L-208ENST00000590843 FAM186BQ8IYM0 893 aa12.34□□□□□ -0.43
SEH1L-208ENST00000590843 MAP4K1Q92918 833 aa12.34□□□□□ -0.43
SEH1L-208ENST00000590843 EIF3CQ99613 913 aaKnown RBP12.34□□□□□ -0.43
SEH1L-208ENST00000590843 COX16Q9P0S2 106 aa12.34□□□□□ -0.43
SEH1L-208ENST00000590843 THAP12O43422 761 aa12.34□□□□□ -0.43
SEH1L-208ENST00000590843 ADH1AP07327 375 aa12.34□□□□□ -0.43
SEH1L-208ENST00000590843 TCF7P36402 384 aaPredicted RBP12.34□□□□□ -0.43
SEH1L-208ENST00000590843 PPP1R7Q15435 360 aa12.34□□□□□ -0.43
SEH1L-208ENST00000590843 FAM43BQ6ZT52 329 aaPredicted RBP12.34□□□□□ -0.43
SEH1L-208ENST00000590843 GJA10Q969M2 543 aa12.34□□□□□ -0.43
SEH1L-208ENST00000590843 CDK5RAP1Q96SZ6 601 aaKnown RBP12.34□□□□□ -0.43
SEH1L-208ENST00000590843 MTRF1LQ9UGC7 380 aaKnown RBP12.34□□□□□ -0.43
SEH1L-208ENST00000590843 SLC45A1Q9Y2W3 748 aa12.34□□□□□ -0.43
SEH1L-208ENST00000590843 PRG3Q9Y2Y8 225 aaPredicted RBP12.34□□□□□ -0.43
SEH1L-208ENST00000590843 ALDH3A1P30838 453 aa12.34□□□□□ -0.43
SEH1L-208ENST00000590843 CYP27A1Q02318 531 aa12.34□□□□□ -0.43
SEH1L-208ENST00000590843 SPECC1Q5M775 1068 aa12.34□□□□□ -0.43
SEH1L-208ENST00000590843 LGSNQ5TDP6 509 aa12.34□□□□□ -0.43
SEH1L-208ENST00000590843 RSPH1Q8WYR4 309 aa12.34□□□□□ -0.43
SEH1L-208ENST00000590843 MRPL17Q9NRX2 175 aaKnown RBP12.34□□□□□ -0.43
SEH1L-208ENST00000590843 ZMYND8Q9ULU4 1186 aaPredicted RBP12.34□□□□□ -0.43
SEH1L-208ENST00000590843 PCDHB6Q9Y5E3 794 aa12.34□□□□□ -0.43
SEH1L-208ENST00000590843 ZNF197O14709 1029 aa12.34□□□□□ -0.43
SEH1L-208ENST00000590843 LAG3P18627 525 aa12.34□□□□□ -0.43
SEH1L-208ENST00000590843 RPS6P62753 249 aaKnown RBP12.34□□□□□ -0.43
SEH1L-208ENST00000590843 MTA1Q13330 715 aa12.34□□□□□ -0.43
SEH1L-208ENST00000590843 GTF2H3Q13889 308 aa12.34□□□□□ -0.43
SEH1L-208ENST00000590843 CMTR1Q8N1G2 835 aaKnown RBP12.34□□□□□ -0.43
SEH1L-208ENST00000590843 JADE2Q9NQC1 790 aa12.34□□□□□ -0.43
SEH1L-208ENST00000590843 UBQLN1Q9UMX0 589 aaKnown RBP12.34□□□□□ -0.43
SEH1L-208ENST00000590843 AFG3L2Q9Y4W6 797 aa12.34□□□□□ -0.43
SEH1L-208ENST00000590843 PCDHB9Q9Y5E1 797 aa12.34□□□□□ -0.43
SEH1L-208ENST00000590843 SLIT2O94813 1529 aa12.33□□□□□ -0.43
SEH1L-208ENST00000590843 GAKO14976 1311 aa12.33□□□□□ -0.43
SEH1L-208ENST00000590843 H3BRB1 525 aa12.33□□□□□ -0.44
SEH1L-208ENST00000590843 ZC3H11AO75152 810 aaKnown RBP eCLIP12.33□□□□□ -0.44
SEH1L-208ENST00000590843 NPM3O75607 178 aaKnown RBP12.33□□□□□ -0.44
SEH1L-208ENST00000590843 PGK2P07205 417 aa12.33□□□□□ -0.44
SEH1L-208ENST00000590843 TBXAS1P24557 533 aaPredicted RBP12.33□□□□□ -0.44
SEH1L-208ENST00000590843 C6orf163Q5TEZ5 329 aa12.33□□□□□ -0.44
SEH1L-208ENST00000590843 INTS8Q75QN2 995 aaKnown RBP12.33□□□□□ -0.44
SEH1L-208ENST00000590843 TMC6Q7Z403 805 aa12.33□□□□□ -0.44
SEH1L-208ENST00000590843 MAP3K14Q99558 947 aa12.33□□□□□ -0.44
SEH1L-208ENST00000590843 TUT1Q9H6E5 874 aaKnown RBP12.33□□□□□ -0.44
SEH1L-208ENST00000590843 PFDN4Q9NQP4 134 aa12.33□□□□□ -0.44
SEH1L-208ENST00000590843 NCKAP1Q9Y2A7 1128 aa12.33□□□□□ -0.44
SEH1L-208ENST00000590843 TLR2O60603 784 aa12.33□□□□□ -0.44
SEH1L-208ENST00000590843 CASQ1P31415 396 aa12.33□□□□□ -0.44
SEH1L-208ENST00000590843 MXI1P50539 228 aa12.33□□□□□ -0.44
SEH1L-208ENST00000590843 STX17P56962 302 aa12.33□□□□□ -0.44
SEH1L-208ENST00000590843 USP17L6PQ6QN14 398 aa12.33□□□□□ -0.44
SEH1L-208ENST00000590843 TBC1D19Q8N5T2 526 aa12.33□□□□□ -0.44
SEH1L-208ENST00000590843 SHDQ96IW2 340 aa12.33□□□□□ -0.44
SEH1L-208ENST00000590843 TMEM51Q9NW97 253 aa12.33□□□□□ -0.44
SEH1L-208ENST00000590843 ABCB4P21439 1286 aa12.33□□□□□ -0.44
SEH1L-208ENST00000590843 PDIA3P30101 505 aaKnown RBP12.33□□□□□ -0.44
SEH1L-208ENST00000590843 MYSM1Q5VVJ2 828 aa12.33□□□□□ -0.44
SEH1L-208ENST00000590843 OR6B2Q6IFH4 312 aa12.33□□□□□ -0.44
SEH1L-208ENST00000590843 SYNRGQ9UMZ2 1314 aa12.33□□□□□ -0.44
SEH1L-208ENST00000590843 A8MXQ7 604 aa12.33□□□□□ -0.44
SEH1L-208ENST00000590843 PRKCQQ04759 706 aa12.33□□□□□ -0.44
SEH1L-208ENST00000590843 NFE2Q16621 373 aaPredicted RBP12.33□□□□□ -0.44
SEH1L-208ENST00000590843 NOP9Q86U38 636 aaKnown RBP12.33□□□□□ -0.44
SEH1L-208ENST00000590843 FBXO16Q8IX29 292 aaPredicted RBP12.33□□□□□ -0.44
SEH1L-208ENST00000590843 BANK1Q8NDB2 785 aa12.33□□□□□ -0.44
SEH1L-208ENST00000590843 PGBD1Q96JS3 809 aa12.33□□□□□ -0.44
SEH1L-208ENST00000590843 MXRA8Q9BRK3 442 aa12.33□□□□□ -0.44
SEH1L-208ENST00000590843 KCND2Q9NZV8 630 aa12.33□□□□□ -0.44
SEH1L-208ENST00000590843 SCAF8Q9UPN6 1271 aaKnown RBP12.33□□□□□ -0.44
SEH1L-208ENST00000590843 UBR1Q8IWV7 1749 aa12.32□□□□□ -0.44
SEH1L-208ENST00000590843 CAND2O75155 1236 aa12.32□□□□□ -0.44
SEH1L-208ENST00000590843 LRMPQ12912 555 aa12.32□□□□□ -0.44
SEH1L-208ENST00000590843 GEN1Q17RS7 908 aa12.32□□□□□ -0.44
SEH1L-208ENST00000590843 ARMC6Q6NXE6 501 aa12.32□□□□□ -0.44
SEH1L-208ENST00000590843 LXNQ9BS40 222 aa12.32□□□□□ -0.44
SEH1L-208ENST00000590843 ADCY6O43306 1168 aa12.32□□□□□ -0.44
SEH1L-208ENST00000590843 MYL5Q02045 173 aa12.32□□□□□ -0.44
SEH1L-208ENST00000590843 ITIH3Q06033 890 aa12.32□□□□□ -0.44
SEH1L-208ENST00000590843 DUOXA2Q1HG44 320 aa12.32□□□□□ -0.44
SEH1L-208ENST00000590843 SAMD11Q96NU1 681 aa12.32□□□□□ -0.44
SEH1L-208ENST00000590843 XPO6Q96QU8 1125 aaKnown RBP12.32□□□□□ -0.44
SEH1L-208ENST00000590843 BHMT2Q9H2M3 363 aa12.32□□□□□ -0.44
SEH1L-208ENST00000590843 TLE6Q9H808 572 aa12.32□□□□□ -0.44
SEH1L-208ENST00000590843 CCL5P13501 91 aa12.32□□□□□ -0.44
SEH1L-208ENST00000590843 SFMBT2Q5VUG0 894 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms