RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 GLP2RO95838 553 aa24.54■■□□□ 1.52
DDX39A-215ENST00000590696 GPC3P51654 580 aa24.54■■□□□ 1.52
DDX39A-215ENST00000590696 ERVFC1P60507 584 aa24.54■■□□□ 1.52
DDX39A-215ENST00000590696 Q4G0T1 1027 aa24.54■■□□□ 1.52
DDX39A-215ENST00000590696 TMEM117Q9H0C3 514 aa24.54■■□□□ 1.52
DDX39A-215ENST00000590696 BARX2Q9UMQ3 279 aaPredicted RBP24.54■■□□□ 1.52
DDX39A-215ENST00000590696 CPLX1O14810 134 aa24.53■■□□□ 1.52
DDX39A-215ENST00000590696 EPB41L2O43491 1005 aaKnown RBP24.53■■□□□ 1.52
DDX39A-215ENST00000590696 PSMD10O75832 226 aa24.53■■□□□ 1.52
DDX39A-215ENST00000590696 DEXIO95424 95 aa24.53■■□□□ 1.52
DDX39A-215ENST00000590696 TDP2O95551 362 aa24.53■■□□□ 1.52
DDX39A-215ENST00000590696 LAG3P18627 525 aa24.53■■□□□ 1.52
DDX39A-215ENST00000590696 TBC1D8BQ0IIM8 1120 aa24.53■■□□□ 1.52
DDX39A-215ENST00000590696 COASYQ13057 564 aa24.53■■□□□ 1.52
DDX39A-215ENST00000590696 MIER3Q7Z3K6 550 aa24.53■■□□□ 1.52
DDX39A-215ENST00000590696 BLIDQ8IZY5 108 aa24.53■■□□□ 1.52
DDX39A-215ENST00000590696 SMRP1Q8NCR6 262 aa24.53■■□□□ 1.52
DDX39A-215ENST00000590696 ZNF274Q96GC6 653 aaPredicted RBP24.53■■□□□ 1.52
DDX39A-215ENST00000590696 SCLT1Q96NL6 688 aa24.53■■□□□ 1.52
DDX39A-215ENST00000590696 CASD1Q96PB1 797 aa24.53■■□□□ 1.52
DDX39A-215ENST00000590696 RNF19AQ9NV58 838 aa24.53■■□□□ 1.52
DDX39A-215ENST00000590696 CYP3A7-CYP3A51PA0A087WV96 503 aa24.52■■□□□ 1.52
DDX39A-215ENST00000590696 HOXA2O43364 376 aa24.52■■□□□ 1.52
DDX39A-215ENST00000590696 CYP3A7P24462 503 aa24.52■■□□□ 1.52
DDX39A-215ENST00000590696 STK3Q13188 491 aa24.52■■□□□ 1.52
DDX39A-215ENST00000590696 TARBP2Q15633 366 aaKnown RBP24.52■■□□□ 1.52
DDX39A-215ENST00000590696 LRRC55Q6ZSA7 311 aa24.52■■□□□ 1.52
DDX39A-215ENST00000590696 ECHDC2Q86YB7 292 aa24.52■■□□□ 1.52
DDX39A-215ENST00000590696 RNF135Q8IUD6 432 aa24.52■■□□□ 1.52
DDX39A-215ENST00000590696 RDM1Q8NG50 284 aa24.52■■□□□ 1.52
DDX39A-215ENST00000590696 M0R2N6 131 aa24.51■■□□□ 1.51
DDX39A-215ENST00000590696 DARSP14868 501 aaKnown RBP24.51■■□□□ 1.51
DDX39A-215ENST00000590696 FGFR4P22455 802 aa24.51■■□□□ 1.51
DDX39A-215ENST00000590696 PDE12Q6L8Q7 609 aaKnown RBP24.51■■□□□ 1.51
DDX39A-215ENST00000590696 ABI1Q8IZP0 508 aa24.51■■□□□ 1.51
DDX39A-215ENST00000590696 RNF169Q8NCN4 708 aa24.51■■□□□ 1.51
DDX39A-215ENST00000590696 NLRP7Q8WX94 980 aa24.51■■□□□ 1.51
DDX39A-215ENST00000590696 SEPT9Q9UHD8 586 aaPredicted RBP24.51■■□□□ 1.51
DDX39A-215ENST00000590696 MUTYHQ9UIF7 546 aa24.51■■□□□ 1.51
DDX39A-215ENST00000590696 FSCN2O14926 492 aa24.5■■□□□ 1.51
DDX39A-215ENST00000590696 RBM10P98175 930 aaKnown RBP24.5■■□□□ 1.51
DDX39A-215ENST00000590696 PLCB3Q01970 1234 aa24.5■■□□□ 1.51
DDX39A-215ENST00000590696 DRP2Q13474 957 aa24.5■■□□□ 1.51
DDX39A-215ENST00000590696 MTERF2Q49AM1 385 aa24.5■■□□□ 1.51
DDX39A-215ENST00000590696 XKR3Q5GH77 459 aa24.5■■□□□ 1.51
DDX39A-215ENST00000590696 B3GNT9Q6UX72 402 aa24.5■■□□□ 1.51
DDX39A-215ENST00000590696 DAGLBQ8NCG7 672 aa24.5■■□□□ 1.51
DDX39A-215ENST00000590696 MRPS27Q92552 414 aaKnown RBP24.5■■□□□ 1.51
DDX39A-215ENST00000590696 AIFM3Q96NN9 605 aa24.5■■□□□ 1.51
DDX39A-215ENST00000590696 CDCA3Q99618 268 aaPredicted RBP24.5■■□□□ 1.51
DDX39A-215ENST00000590696 NIFKQ9BYG3 293 aaKnown RBP24.5■■□□□ 1.51
DDX39A-215ENST00000590696 TM6SF1Q9BZW5 370 aa24.5■■□□□ 1.51
DDX39A-215ENST00000590696 PUF60Q9UHX1 559 aaKnown RBP24.5■■□□□ 1.51
DDX39A-215ENST00000590696 LZTS1Q9Y250 596 aa24.5■■□□□ 1.51
DDX39A-215ENST00000590696 TMEM150BA6NC51 233 aa24.49■■□□□ 1.51
DDX39A-215ENST00000590696 STBD1O95210 358 aa24.49■■□□□ 1.51
DDX39A-215ENST00000590696 NPY5RQ15761 445 aa24.49■■□□□ 1.51
DDX39A-215ENST00000590696 DUSP6Q16828 381 aa24.49■■□□□ 1.51
DDX39A-215ENST00000590696 HERC4Q5GLZ8 1057 aaPredicted RBP24.49■■□□□ 1.51
DDX39A-215ENST00000590696 CPLX2Q6PUV4 134 aaKnown RBP24.49■■□□□ 1.51
DDX39A-215ENST00000590696 KCNT2Q6UVM3 1135 aa24.49■■□□□ 1.51
DDX39A-215ENST00000590696 LRRC43Q8N309 656 aa24.49■■□□□ 1.51
DDX39A-215ENST00000590696 VN1R2Q8NFZ6 395 aa24.49■■□□□ 1.51
DDX39A-215ENST00000590696 MBOAT7Q96N66 472 aa24.49■■□□□ 1.51
DDX39A-215ENST00000590696 ZNF558Q96NG5 402 aa24.49■■□□□ 1.51
DDX39A-215ENST00000590696 SH2D3AQ9BRG2 576 aa24.49■■□□□ 1.51
DDX39A-215ENST00000590696 USP15Q9Y4E8 981 aaPredicted RBP24.49■■□□□ 1.51
DDX39A-215ENST00000590696 A0A0U1RQF3 1178 aa24.48■■□□□ 1.51
DDX39A-215ENST00000590696 CSDE1O75534 798 aaKnown RBP24.48■■□□□ 1.51
DDX39A-215ENST00000590696 HOXD11P31277 338 aaPredicted RBP24.48■■□□□ 1.51
DDX39A-215ENST00000590696 PBX3P40426 434 aa24.48■■□□□ 1.51
DDX39A-215ENST00000590696 NONOQ15233 471 aaKnown RBP eCLIP24.48■■□□□ 1.512e-7■■■□□ 16.3
DDX39A-215ENST00000590696 CLLU1OSQ5K130 101 aa24.48■■□□□ 1.51
DDX39A-215ENST00000590696 PLPP4Q5VZY2 271 aa24.48■■□□□ 1.51
DDX39A-215ENST00000590696 GALNT17Q6IS24 598 aa24.48■■□□□ 1.51
DDX39A-215ENST00000590696 MOXD1Q6UVY6 613 aa24.48■■□□□ 1.51
DDX39A-215ENST00000590696 ETNPPLQ8TBG4 499 aa24.48■■□□□ 1.51
DDX39A-215ENST00000590696 CEP89Q96ST8 783 aa24.48■■□□□ 1.51
DDX39A-215ENST00000590696 FSD2A1L4K1 749 aa24.47■■□□□ 1.51
DDX39A-215ENST00000590696 EOMESO95936 686 aa24.47■■□□□ 1.51
DDX39A-215ENST00000590696 CDC42EP1Q00587 391 aa24.47■■□□□ 1.51
DDX39A-215ENST00000590696 INF2Q27J81 1249 aa24.47■■□□□ 1.51
DDX39A-215ENST00000590696 FAM177A1Q8N128 213 aaPredicted RBP24.47■■□□□ 1.51
DDX39A-215ENST00000590696 TCF25Q9BQ70 676 aa24.47■■□□□ 1.51
DDX39A-215ENST00000590696 GCOM2Q9BZD3 368 aaPredicted RBP24.47■■□□□ 1.51
DDX39A-215ENST00000590696 ENTPD7Q9NQZ7 604 aa24.47■■□□□ 1.51
DDX39A-215ENST00000590696 PDRG1Q9NUG6 133 aa24.47■■□□□ 1.51
DDX39A-215ENST00000590696 DDX25Q9UHL0 483 aaKnown RBP24.47■■□□□ 1.51
DDX39A-215ENST00000590696 KCNJ14Q9UNX9 436 aa24.47■■□□□ 1.51
DDX39A-215ENST00000590696 IGKV6-21A0A0C4DH24 114 aa24.46■■□□□ 1.51
DDX39A-215ENST00000590696 DDX11L8A8MPP1 907 aa24.46■■□□□ 1.51
DDX39A-215ENST00000590696 LOC730098B7Z3J9 87 aa24.46■■□□□ 1.51
DDX39A-215ENST00000590696 PPM1AP35813 382 aa24.46■■□□□ 1.51
DDX39A-215ENST00000590696 DNM2P50570 870 aa24.46■■□□□ 1.51
DDX39A-215ENST00000590696 KRT17Q04695 432 aa24.46■■□□□ 1.51
DDX39A-215ENST00000590696 KRT25Q7Z3Z0 450 aa24.46■■□□□ 1.51
DDX39A-215ENST00000590696 ZNF598Q86UK7 904 aaKnown RBP24.46■■□□□ 1.51
DDX39A-215ENST00000590696 HELQQ8TDG4 1101 aa24.46■■□□□ 1.51
DDX39A-215ENST00000590696 DACT1Q9NYF0 836 aa24.46■■□□□ 1.51
DDX39A-215ENST00000590696 SPG21Q9NZD8 308 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms