RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 HRO43593 1189 aa7.46□□□□□ -1.22
DNMT1-222ENST00000590619 PPP1R11O60927 126 aaPredicted RBP7.46□□□□□ -1.22
DNMT1-222ENST00000590619 LILRB3O75022 631 aa7.46□□□□□ -1.22
DNMT1-222ENST00000590619 TOP3BO95985 862 aaKnown RBP7.46□□□□□ -1.22
DNMT1-222ENST00000590619 CNPP09543 421 aaKnown RBP7.46□□□□□ -1.22
DNMT1-222ENST00000590619 SPINK2P20155 84 aa7.46□□□□□ -1.22
DNMT1-222ENST00000590619 KLRC2P26717 231 aa7.46□□□□□ -1.22
DNMT1-222ENST00000590619 ALDH7A1P49419 539 aaKnown RBP7.46□□□□□ -1.22
DNMT1-222ENST00000590619 LIMK1P53667 647 aa7.46□□□□□ -1.22
DNMT1-222ENST00000590619 POLGP54098 1239 aaPredicted RBP7.46□□□□□ -1.22
DNMT1-222ENST00000590619 PRKCQQ04759 706 aa7.46□□□□□ -1.22
DNMT1-222ENST00000590619 HTR4Q13639 388 aa7.46□□□□□ -1.22
DNMT1-222ENST00000590619 PLCB4Q15147 1175 aa7.46□□□□□ -1.22
DNMT1-222ENST00000590619 GNPTABQ3T906 1256 aa7.46□□□□□ -1.22
DNMT1-222ENST00000590619 ZBTB41Q5SVQ8 909 aa7.46□□□□□ -1.22
DNMT1-222ENST00000590619 DDX53Q86TM3 631 aaKnown RBP7.46□□□□□ -1.22
DNMT1-222ENST00000590619 CMASQ8NFW8 434 aaPredicted RBP7.46□□□□□ -1.22
DNMT1-222ENST00000590619 TRAPPC12Q8WVT3 735 aa7.46□□□□□ -1.22
DNMT1-222ENST00000590619 PCYT2Q99447 389 aa7.46□□□□□ -1.22
DNMT1-222ENST00000590619 LSM14BQ9BX40 385 aaKnown RBP7.46□□□□□ -1.22
DNMT1-222ENST00000590619 AMNQ9BXJ7 453 aa7.46□□□□□ -1.22
DNMT1-222ENST00000590619 SMARCAD1Q9H4L7 1026 aa7.46□□□□□ -1.22
DNMT1-222ENST00000590619 LTB4R2Q9NPC1 389 aa7.46□□□□□ -1.22
DNMT1-222ENST00000590619 PRMT8Q9NR22 394 aaPredicted RBP7.46□□□□□ -1.22
DNMT1-222ENST00000590619 TOMM22Q9NS69 142 aa7.46□□□□□ -1.22
DNMT1-222ENST00000590619 RXFP3Q9NSD7 469 aa7.46□□□□□ -1.22
DNMT1-222ENST00000590619 ECHDC1Q9NTX5 307 aa7.46□□□□□ -1.22
DNMT1-222ENST00000590619 KAT6AQ92794 2004 aa7.45□□□□□ -1.22
DNMT1-222ENST00000590619 TMEM8BA6NDV4 472 aa7.45□□□□□ -1.22
DNMT1-222ENST00000590619 SPDYE4A6NLX3 237 aa7.45□□□□□ -1.22
DNMT1-222ENST00000590619 GCOM1H8Y6P7 765 aaPredicted RBP7.45□□□□□ -1.22
DNMT1-222ENST00000590619 HOXA2O43364 376 aa7.45□□□□□ -1.22
DNMT1-222ENST00000590619 SMARCA5O60264 1052 aaPredicted RBP7.45□□□□□ -1.22
DNMT1-222ENST00000590619 STAM2O75886 525 aa7.45□□□□□ -1.22
DNMT1-222ENST00000590619 POLR2MP0CAP2 368 aa7.45□□□□□ -1.22
DNMT1-222ENST00000590619 MYBP10242 640 aa7.45□□□□□ -1.22
DNMT1-222ENST00000590619 KLRC1P26715 233 aa7.45□□□□□ -1.22
DNMT1-222ENST00000590619 MAGEA9P43362 315 aa7.45□□□□□ -1.22
DNMT1-222ENST00000590619 NRLP54845 237 aa7.45□□□□□ -1.22
DNMT1-222ENST00000590619 MTAPQ13126 283 aa7.45□□□□□ -1.22
DNMT1-222ENST00000590619 MLF2Q15773 248 aaPredicted RBP7.45□□□□□ -1.22
DNMT1-222ENST00000590619 CLLU1OSQ5K130 101 aa7.45□□□□□ -1.22
DNMT1-222ENST00000590619 ZMYM1Q5SVZ6 1142 aa7.45□□□□□ -1.22
DNMT1-222ENST00000590619 VPS53Q5VIR6 699 aa7.45□□□□□ -1.22
DNMT1-222ENST00000590619 MTHFD1LQ6UB35 978 aa7.45□□□□□ -1.22
DNMT1-222ENST00000590619 PARM1Q6UWI2 310 aa7.45□□□□□ -1.22
DNMT1-222ENST00000590619 RSPO2Q6UXX9 243 aaPredicted RBP7.45□□□□□ -1.22
DNMT1-222ENST00000590619 CYP26C1Q6V0L0 522 aa7.45□□□□□ -1.22
DNMT1-222ENST00000590619 PRR23BQ6ZRT6 265 aa7.45□□□□□ -1.22
DNMT1-222ENST00000590619 FAM228AQ86W67 206 aa7.45□□□□□ -1.22
DNMT1-222ENST00000590619 ECHDC2Q86YB7 292 aa7.45□□□□□ -1.22
DNMT1-222ENST00000590619 KIAA0319LQ8IZA0 1049 aa7.45□□□□□ -1.22
DNMT1-222ENST00000590619 LRRC43Q8N309 656 aa7.45□□□□□ -1.22
DNMT1-222ENST00000590619 BCL7CQ8WUZ0 217 aaPredicted RBP7.45□□□□□ -1.22
DNMT1-222ENST00000590619 STAMQ92783 540 aa7.45□□□□□ -1.22
DNMT1-222ENST00000590619 GATA6Q92908 595 aa7.45□□□□□ -1.22
DNMT1-222ENST00000590619 TMEM169Q96HH4 297 aa7.45□□□□□ -1.22
DNMT1-222ENST00000590619 NELL2Q99435 816 aa7.45□□□□□ -1.22
DNMT1-222ENST00000590619 VN1R3Q9BXE9 311 aa7.45□□□□□ -1.22
DNMT1-222ENST00000590619 RHOBTB2Q9BYZ6 727 aa7.45□□□□□ -1.22
DNMT1-222ENST00000590619 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.45□□□□□ -1.22
DNMT1-222ENST00000590619 CEP295Q9C0D2 2601 aa7.45□□□□□ -1.22
DNMT1-222ENST00000590619 SHISA7A6NL88 538 aa7.44□□□□□ -1.22
DNMT1-222ENST00000590619 DHX16O60231 1041 aaKnown RBP7.44□□□□□ -1.22
DNMT1-222ENST00000590619 FOXD2O60548 495 aaPredicted RBP7.44□□□□□ -1.22
DNMT1-222ENST00000590619 RFPL2O75678 378 aa7.44□□□□□ -1.22
DNMT1-222ENST00000590619 TARSP26639 723 aaKnown RBP7.44□□□□□ -1.22
DNMT1-222ENST00000590619 RPS9P46781 194 aaKnown RBP7.44□□□□□ -1.22
DNMT1-222ENST00000590619 SIM2Q14190 667 aaPredicted RBP7.44□□□□□ -1.22
DNMT1-222ENST00000590619 ALX1Q15699 326 aa7.44□□□□□ -1.22
DNMT1-222ENST00000590619 ODR4Q5SWX8 454 aa7.44□□□□□ -1.22
DNMT1-222ENST00000590619 TSHZ3Q63HK5 1081 aa7.44□□□□□ -1.22
DNMT1-222ENST00000590619 MAMSTRQ6ZN01 415 aa7.44□□□□□ -1.22
DNMT1-222ENST00000590619 DGKHQ86XP1 1220 aa7.44□□□□□ -1.22
DNMT1-222ENST00000590619 ABI1Q8IZP0 508 aa7.44□□□□□ -1.22
DNMT1-222ENST00000590619 GIMAP8Q8ND71 665 aaPredicted RBP7.44□□□□□ -1.22
DNMT1-222ENST00000590619 FGF14Q92915 247 aa7.44□□□□□ -1.22
DNMT1-222ENST00000590619 ZNF707Q96C28 371 aaPredicted RBP7.44□□□□□ -1.22
DNMT1-222ENST00000590619 MTMR8Q96EF0 704 aa7.44□□□□□ -1.22
DNMT1-222ENST00000590619 KIF12Q96FN5 646 aa7.44□□□□□ -1.22
DNMT1-222ENST00000590619 IGSF21Q96ID5 467 aa7.44□□□□□ -1.22
DNMT1-222ENST00000590619 ZKSCAN3Q9BRR0 538 aa7.44□□□□□ -1.22
DNMT1-222ENST00000590619 ASH1LQ9NR48 2969 aaKnown RBP7.44□□□□□ -1.22
DNMT1-222ENST00000590619 FAM217BQ9NTX9 383 aaPredicted RBP7.44□□□□□ -1.22
DNMT1-222ENST00000590619 SMG1Q96Q15 3661 aaKnown RBP7.44□□□□□ -1.22
DNMT1-222ENST00000590619 CLUHO75153 1309 aa7.44□□□□□ -1.22
DNMT1-222ENST00000590619 GCN1Q92616 2671 aaKnown RBP7.44□□□□□ -1.22
DNMT1-222ENST00000590619 GIPC1O14908 333 aa7.43□□□□□ -1.22
DNMT1-222ENST00000590619 INPPL1O15357 1258 aa7.43□□□□□ -1.22
DNMT1-222ENST00000590619 NCAM2O15394 837 aa7.43□□□□□ -1.22
DNMT1-222ENST00000590619 PAPLNO95428 1278 aa7.43□□□□□ -1.22
DNMT1-222ENST00000590619 FGAP02671 866 aa7.43□□□□□ -1.22
DNMT1-222ENST00000590619 GALTP07902 379 aa7.43□□□□□ -1.22
DNMT1-222ENST00000590619 KCNA2P16389 499 aa7.43□□□□□ -1.22
DNMT1-222ENST00000590619 CRYBB1P53674 252 aaPredicted RBP7.43□□□□□ -1.22
DNMT1-222ENST00000590619 FOXC1Q12948 553 aa7.43□□□□□ -1.22
DNMT1-222ENST00000590619 SRSF5Q13243 272 aaKnown RBP7.43□□□□□ -1.22
DNMT1-222ENST00000590619 SF3A2Q15428 464 aaKnown RBP7.43□□□□□ -1.22
DNMT1-222ENST00000590619 AASDHQ4L235 1098 aaPredicted RBP7.43□□□□□ -1.22
DNMT1-222ENST00000590619 STPG1Q5TH74 334 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms